PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
e4f1 | dr11_v1_chr3_-_18737126_18737126 | 0.83 | 1.6e-24 | Click! |
si:dkeyp-79b7.12 | dr11_v1_chr22_+_2207502_2207502 | 0.53 | 4.4e-08 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_51606552 Show fit | 7.60 |
ENSDART00000130828
|
cannabinoid receptor interacting protein 1a |
|
chr2_-_42415902 Show fit | 7.41 |
ENSDART00000142489
|
solute carrier organic anion transporter family member 5A1b |
|
chr24_-_7632187 Show fit | 7.18 |
ENSDART00000041714
|
ATPase H+ transporting V0 subunit a1b |
|
chr23_-_35694171 Show fit | 7.14 |
ENSDART00000077539
|
tubulin, alpha 1c |
|
chr15_-_163586 Show fit | 6.90 |
ENSDART00000163597
|
septin-4 |
|
chr4_+_9669717 Show fit | 6.26 |
ENSDART00000004604
|
si:dkey-153k10.9 |
|
chr20_+_29743904 Show fit | 6.17 |
ENSDART00000146366
ENSDART00000153154 |
kinase D-interacting substrate 220b |
|
chr23_-_35694461 Show fit | 5.46 |
ENSDART00000185884
|
tubulin, alpha 1c |
|
chr22_-_29922872 Show fit | 5.44 |
ENSDART00000020249
|
dual specificity phosphatase 5 |
|
chr23_-_29668286 Show fit | 5.03 |
ENSDART00000129248
|
calsyntenin 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 12.6 | GO:0000226 | microtubule cytoskeleton organization(GO:0000226) |
0.0 | 10.0 | GO:0018105 | peptidyl-serine phosphorylation(GO:0018105) |
0.7 | 9.5 | GO:0035970 | peptidyl-threonine dephosphorylation(GO:0035970) |
0.8 | 7.6 | GO:2000272 | negative regulation of receptor activity(GO:2000272) |
0.5 | 7.2 | GO:0051452 | vacuolar acidification(GO:0007035) pH reduction(GO:0045851) intracellular pH reduction(GO:0051452) |
1.3 | 5.0 | GO:0030951 | establishment or maintenance of microtubule cytoskeleton polarity(GO:0030951) |
0.1 | 4.7 | GO:0051091 | positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091) |
0.1 | 4.5 | GO:0007212 | dopamine receptor signaling pathway(GO:0007212) |
0.1 | 4.3 | GO:0006096 | glycolytic process(GO:0006096) |
0.2 | 4.1 | GO:0031468 | nuclear envelope reassembly(GO:0031468) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 13.7 | GO:0005874 | microtubule(GO:0005874) |
0.1 | 8.9 | GO:0031902 | late endosome membrane(GO:0031902) |
0.7 | 7.2 | GO:0000220 | vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220) |
0.0 | 5.0 | GO:0045211 | postsynaptic membrane(GO:0045211) |
0.1 | 4.5 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.0 | 4.5 | GO:0005667 | transcription factor complex(GO:0005667) |
0.1 | 3.6 | GO:0005876 | spindle microtubule(GO:0005876) |
0.1 | 3.1 | GO:0035869 | ciliary transition zone(GO:0035869) |
0.0 | 3.0 | GO:0048471 | perinuclear region of cytoplasm(GO:0048471) |
0.2 | 2.6 | GO:0030015 | CCR4-NOT core complex(GO:0030015) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 12.6 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.7 | 9.5 | GO:0008330 | protein tyrosine/threonine phosphatase activity(GO:0008330) |
0.5 | 7.2 | GO:0051117 | ATPase binding(GO:0051117) |
0.0 | 7.0 | GO:0001664 | G-protein coupled receptor binding(GO:0001664) |
0.2 | 6.2 | GO:0030165 | PDZ domain binding(GO:0030165) |
0.0 | 4.6 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.9 | 4.5 | GO:0051430 | mu-type opioid receptor binding(GO:0031852) corticotropin-releasing hormone receptor 1 binding(GO:0051430) |
1.1 | 4.3 | GO:0004365 | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891) |
1.2 | 3.7 | GO:0001635 | adrenomedullin receptor activity(GO:0001605) calcitonin gene-related peptide receptor activity(GO:0001635) |
0.1 | 3.7 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.4 | PID ATF2 PATHWAY | ATF-2 transcription factor network |
0.3 | 3.9 | PID S1P S1P1 PATHWAY | S1P1 pathway |
0.0 | 2.6 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.0 | 1.8 | PID ATR PATHWAY | ATR signaling pathway |
0.0 | 1.2 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.0 | 0.9 | SA PTEN PATHWAY | PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. |
0.0 | 0.7 | PID P38 ALPHA BETA PATHWAY | Regulation of p38-alpha and p38-beta |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 12.6 | REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY | Genes involved in Post-chaperonin tubulin folding pathway |
0.2 | 4.3 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.2 | 2.7 | REACTOME PECAM1 INTERACTIONS | Genes involved in PECAM1 interactions |
0.2 | 2.6 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |
0.0 | 2.5 | REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS | Genes involved in Glycerophospholipid biosynthesis |
0.2 | 2.2 | REACTOME MEMBRANE BINDING AND TARGETTING OF GAG PROTEINS | Genes involved in Membrane binding and targetting of GAG proteins |
0.1 | 1.8 | REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND | Genes involved in Removal of the Flap Intermediate from the C-strand |
0.1 | 1.3 | REACTOME SIGNALING BY FGFR1 FUSION MUTANTS | Genes involved in Signaling by FGFR1 fusion mutants |
0.0 | 1.2 | REACTOME G PROTEIN ACTIVATION | Genes involved in G-protein activation |
0.0 | 1.2 | REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT | Genes involved in ABC-family proteins mediated transport |