PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
jun | dr11_v1_chr20_+_15552657_15552657 | 0.18 | 7.9e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr20_+_26880668 Show fit | 14.05 |
ENSDART00000077769
|
serpin peptidase inhibitor, clade B (ovalbumin), member 1 |
|
chr20_+_28364742 Show fit | 13.60 |
ENSDART00000103355
|
ras homolog family member V |
|
chr16_+_23403602 Show fit | 11.35 |
ENSDART00000159848
|
S100 calcium binding protein W |
|
chr7_+_25033924 Show fit | 8.80 |
ENSDART00000170873
|
sb:cb1058 |
|
chr21_+_25765734 Show fit | 7.60 |
ENSDART00000021664
|
claudin b |
|
chr19_+_24488403 Show fit | 7.47 |
ENSDART00000052421
|
thioredoxin interacting protein a |
|
chr16_-_24832038 Show fit | 7.42 |
ENSDART00000153731
|
si:dkey-79d12.5 |
|
chr1_-_25679339 Show fit | 7.22 |
ENSDART00000161703
ENSDART00000054230 |
fibrinogen gamma chain |
|
chr13_+_23988442 Show fit | 6.34 |
ENSDART00000010918
|
angiotensinogen |
|
chr5_+_45677781 Show fit | 6.07 |
ENSDART00000163120
ENSDART00000126537 |
group-specific component (vitamin D binding protein) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 21.5 | GO:0001867 | complement activation, lectin pathway(GO:0001867) |
4.5 | 13.6 | GO:0071896 | protein localization to adherens junction(GO:0071896) |
0.2 | 12.5 | GO:0007029 | endoplasmic reticulum organization(GO:0007029) |
0.2 | 8.1 | GO:0031102 | neuron projection regeneration(GO:0031102) |
2.6 | 7.8 | GO:0043576 | respiratory gaseous exchange(GO:0007585) regulation of respiratory gaseous exchange(GO:0043576) |
1.1 | 7.4 | GO:0045901 | positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905) |
0.1 | 7.4 | GO:0045930 | negative regulation of mitotic cell cycle(GO:0045930) |
0.1 | 7.3 | GO:0070830 | apical junction assembly(GO:0043297) bicellular tight junction assembly(GO:0070830) |
0.5 | 7.2 | GO:0072378 | blood coagulation, fibrin clot formation(GO:0072378) |
0.1 | 7.1 | GO:0007596 | blood coagulation(GO:0007596) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 62.7 | GO:0005615 | extracellular space(GO:0005615) |
0.0 | 12.9 | GO:0005739 | mitochondrion(GO:0005739) |
0.1 | 11.6 | GO:0048471 | perinuclear region of cytoplasm(GO:0048471) |
0.4 | 7.8 | GO:0009925 | basal plasma membrane(GO:0009925) |
0.1 | 7.4 | GO:0005643 | nuclear pore(GO:0005643) |
2.4 | 7.2 | GO:0005577 | fibrinogen complex(GO:0005577) |
0.1 | 7.1 | GO:0005923 | bicellular tight junction(GO:0005923) occluding junction(GO:0070160) |
0.3 | 5.7 | GO:0030057 | desmosome(GO:0030057) |
0.1 | 5.5 | GO:0031941 | filamentous actin(GO:0031941) |
0.6 | 4.8 | GO:0042613 | MHC class II protein complex(GO:0042613) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 23.0 | GO:0003823 | antigen binding(GO:0003823) |
0.7 | 18.5 | GO:0048306 | calcium-dependent protein binding(GO:0048306) |
0.1 | 15.3 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 10.8 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.1 | 9.2 | GO:0045296 | cadherin binding(GO:0045296) |
0.1 | 8.2 | GO:0031625 | ubiquitin protein ligase binding(GO:0031625) |
1.3 | 7.8 | GO:0004392 | heme oxygenase (decyclizing) activity(GO:0004392) |
0.3 | 6.8 | GO:0042805 | actinin binding(GO:0042805) |
0.1 | 6.3 | GO:0043022 | ribosome binding(GO:0043022) |
0.2 | 6.2 | GO:0030165 | PDZ domain binding(GO:0030165) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 13.3 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 9.1 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.4 | 7.2 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.2 | 6.2 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.3 | 5.9 | SA G1 AND S PHASES | Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition. |
0.0 | 5.9 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.2 | 5.3 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
0.1 | 4.5 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.2 | 3.5 | PID ARF6 PATHWAY | Arf6 signaling events |
0.1 | 3.5 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.7 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 9.7 | REACTOME PPARA ACTIVATES GENE EXPRESSION | Genes involved in PPARA Activates Gene Expression |
0.4 | 9.6 | REACTOME PTM GAMMA CARBOXYLATION HYPUSINE FORMATION AND ARYLSULFATASE ACTIVATION | Genes involved in PTM: gamma carboxylation, hypusine formation and arylsulfatase activation |
0.6 | 7.2 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
0.2 | 6.1 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.4 | 3.5 | REACTOME ACTIVATION OF BH3 ONLY PROTEINS | Genes involved in Activation of BH3-only proteins |
0.3 | 3.5 | REACTOME SEMA4D IN SEMAPHORIN SIGNALING | Genes involved in Sema4D in semaphorin signaling |
0.2 | 3.1 | REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS | Genes involved in Purine ribonucleoside monophosphate biosynthesis |
0.2 | 2.9 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
0.3 | 2.7 | REACTOME ADVANCED GLYCOSYLATION ENDPRODUCT RECEPTOR SIGNALING | Genes involved in Advanced glycosylation endproduct receptor signaling |