PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
zgc:153115 | dr11_v1_chr2_-_7246338_7246338 | -0.18 | 8.1e-02 | Click! |
klf13 | dr11_v1_chr25_-_34512102_34512102 | -0.07 | 5.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr16_-_17197546 Show fit | 13.35 |
ENSDART00000139939
ENSDART00000135146 ENSDART00000063800 ENSDART00000163606 |
glyceraldehyde-3-phosphate dehydrogenase |
|
chr4_-_9852318 Show fit | 6.74 |
ENSDART00000080702
|
glycosyltransferase 8 domain containing 2 |
|
chr19_+_9305964 Show fit | 4.61 |
ENSDART00000136241
|
si:ch73-15n24.1 |
|
chr25_+_6122823 Show fit | 4.55 |
ENSDART00000191824
ENSDART00000067514 |
RNA binding protein with multiple splicing 2a |
|
chr9_+_30421489 Show fit | 3.88 |
ENSDART00000145025
ENSDART00000132058 |
zgc:113314 |
|
chr4_-_20177868 Show fit | 3.79 |
ENSDART00000003621
|
siaz-interacting nuclear protein |
|
chr16_-_42523744 Show fit | 3.73 |
ENSDART00000017185
|
T-box 20 |
|
chr8_-_32491430 Show fit | 3.48 |
ENSDART00000163962
ENSDART00000168929 |
si:dkey-164f24.2 |
|
chr8_+_25302172 Show fit | 3.08 |
ENSDART00000046182
ENSDART00000145316 |
glutathione S-transferase mu tandem duplicate 3 |
|
chr6_-_25165693 Show fit | 2.81 |
ENSDART00000167259
|
zinc finger protein 326 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 13.3 | GO:0050821 | protein stabilization(GO:0050821) |
0.9 | 4.5 | GO:0051145 | smooth muscle cell differentiation(GO:0051145) negative regulation of muscle cell differentiation(GO:0051148) |
1.4 | 4.2 | GO:0005997 | xylulose metabolic process(GO:0005997) |
0.3 | 3.8 | GO:0001840 | neural plate development(GO:0001840) |
0.9 | 3.7 | GO:0055021 | regulation of cardiac muscle tissue growth(GO:0055021) regulation of cardiac muscle cell proliferation(GO:0060043) |
0.0 | 3.5 | GO:0006954 | inflammatory response(GO:0006954) |
0.0 | 3.5 | GO:0032259 | methylation(GO:0032259) |
0.1 | 3.1 | GO:0006749 | glutathione metabolic process(GO:0006749) |
0.1 | 2.7 | GO:0032784 | regulation of DNA-templated transcription, elongation(GO:0032784) |
0.6 | 2.5 | GO:0046900 | tetrahydrofolylpolyglutamate metabolic process(GO:0046900) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 24.1 | GO:0005829 | cytosol(GO:0005829) |
0.0 | 3.6 | GO:0000785 | chromatin(GO:0000785) |
0.7 | 2.8 | GO:0044609 | DBIRD complex(GO:0044609) |
0.0 | 2.7 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.0 | 2.5 | GO:0042641 | actomyosin(GO:0042641) |
0.2 | 2.2 | GO:0005945 | 6-phosphofructokinase complex(GO:0005945) |
0.0 | 1.9 | GO:0098857 | membrane raft(GO:0045121) membrane microdomain(GO:0098857) |
0.1 | 1.7 | GO:0000164 | protein phosphatase type 1 complex(GO:0000164) |
0.0 | 1.6 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.0 | 1.3 | GO:0005777 | peroxisome(GO:0005777) microbody(GO:0042579) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.3 | 13.3 | GO:0004365 | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891) |
0.0 | 4.6 | GO:0016757 | transferase activity, transferring glycosyl groups(GO:0016757) |
0.0 | 4.5 | GO:0042803 | protein homodimerization activity(GO:0042803) |
0.0 | 4.4 | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors(GO:0016614) |
0.0 | 4.1 | GO:0003924 | GTPase activity(GO:0003924) |
1.2 | 3.7 | GO:0008119 | thiopurine S-methyltransferase activity(GO:0008119) |
0.1 | 3.3 | GO:0004364 | glutathione transferase activity(GO:0004364) |
0.1 | 3.2 | GO:0005154 | epidermal growth factor receptor binding(GO:0005154) |
0.1 | 2.5 | GO:0000993 | RNA polymerase II core binding(GO:0000993) |
0.1 | 2.5 | GO:0016881 | acid-amino acid ligase activity(GO:0016881) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 13.8 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.1 | 2.2 | PID FOXO PATHWAY | FoxO family signaling |
0.1 | 1.7 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 0.5 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
0.0 | 0.4 | PID IL27 PATHWAY | IL27-mediated signaling events |
0.0 | 0.4 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 13.3 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.0 | 2.3 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
0.2 | 2.2 | REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT | Genes involved in Chylomicron-mediated lipid transport |
0.1 | 2.1 | REACTOME MITOCHONDRIAL FATTY ACID BETA OXIDATION | Genes involved in Mitochondrial Fatty Acid Beta-Oxidation |
0.1 | 1.3 | REACTOME ALPHA LINOLENIC ACID ALA METABOLISM | Genes involved in alpha-linolenic acid (ALA) metabolism |
0.1 | 0.7 | REACTOME MEMBRANE BINDING AND TARGETTING OF GAG PROTEINS | Genes involved in Membrane binding and targetting of GAG proteins |
0.0 | 0.6 | REACTOME ELONGATION ARREST AND RECOVERY | Genes involved in Elongation arrest and recovery |
0.0 | 0.5 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.0 | 0.5 | REACTOME PYRUVATE METABOLISM | Genes involved in Pyruvate metabolism |
0.0 | 0.4 | REACTOME IL 6 SIGNALING | Genes involved in Interleukin-6 signaling |