PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
si:dkey-172o19.2 | dr11_v1_chr22_+_20546612_20546612 | 0.16 | 1.1e-01 | Click! |
nfil3-4 | dr11_v1_chr22_+_20560041_20560041 | 0.14 | 1.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr24_-_26310854 Show fit | 9.50 |
ENSDART00000080113
|
apolipoprotein Db |
|
chr4_-_12725513 Show fit | 8.27 |
ENSDART00000132286
|
microsomal glutathione S-transferase 1.2 |
|
chr25_-_13188678 Show fit | 7.26 |
ENSDART00000125754
|
si:ch211-147m6.1 |
|
chr5_+_29831235 Show fit | 7.25 |
ENSDART00000109660
|
F11 receptor, tandem duplicate 1 |
|
chr1_-_10071422 Show fit | 6.35 |
ENSDART00000135522
ENSDART00000033118 |
fibrinogen alpha chain |
|
chr9_-_45602978 Show fit | 6.18 |
ENSDART00000139019
ENSDART00000085763 |
anterior gradient 1 |
|
chr11_+_25278772 Show fit | 6.12 |
ENSDART00000188630
|
cylindromatosis (turban tumor syndrome), b |
|
chr14_+_21107032 Show fit | 6.12 |
ENSDART00000138319
ENSDART00000139103 ENSDART00000184735 |
aldolase b, fructose-bisphosphate |
|
chr3_+_49043917 Show fit | 5.96 |
ENSDART00000158212
|
zgc:92161 |
|
chr18_-_5598958 Show fit | 5.91 |
ENSDART00000161538
|
cytochrome P450, family 1, subfamily A |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 39.5 | GO:0071466 | cellular response to xenobiotic stimulus(GO:0071466) |
0.5 | 15.3 | GO:0007568 | aging(GO:0007568) |
1.2 | 12.1 | GO:0042989 | sequestering of actin monomers(GO:0042989) |
1.8 | 10.9 | GO:0006572 | tyrosine catabolic process(GO:0006572) |
0.7 | 10.8 | GO:0042574 | retinal metabolic process(GO:0042574) |
0.3 | 10.4 | GO:0030199 | collagen fibril organization(GO:0030199) |
1.2 | 9.6 | GO:0072488 | ammonium transmembrane transport(GO:0072488) |
1.3 | 8.9 | GO:0045329 | carnitine biosynthetic process(GO:0045329) |
0.6 | 8.8 | GO:0032088 | negative regulation of NF-kappaB transcription factor activity(GO:0032088) |
0.6 | 8.2 | GO:0050892 | intestinal absorption(GO:0050892) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 65.9 | GO:0005615 | extracellular space(GO:0005615) |
0.0 | 26.1 | GO:0005576 | extracellular region(GO:0005576) |
0.0 | 24.6 | GO:0005783 | endoplasmic reticulum(GO:0005783) |
0.1 | 15.2 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.1 | 14.2 | GO:0042579 | peroxisome(GO:0005777) microbody(GO:0042579) |
0.8 | 11.6 | GO:0034364 | high-density lipoprotein particle(GO:0034364) |
0.1 | 10.3 | GO:0005923 | bicellular tight junction(GO:0005923) occluding junction(GO:0070160) |
0.1 | 8.8 | GO:0005795 | Golgi stack(GO:0005795) |
0.4 | 6.5 | GO:0016328 | lateral plasma membrane(GO:0016328) |
2.1 | 6.4 | GO:0005577 | fibrinogen complex(GO:0005577) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 33.8 | GO:0046983 | protein dimerization activity(GO:0046983) |
0.6 | 17.8 | GO:0004364 | glutathione transferase activity(GO:0004364) |
0.0 | 14.4 | GO:0008289 | lipid binding(GO:0008289) |
0.2 | 14.2 | GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) |
0.6 | 12.8 | GO:0003785 | actin monomer binding(GO:0003785) |
0.2 | 10.6 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.4 | 9.6 | GO:0008519 | ammonium transmembrane transporter activity(GO:0008519) |
0.0 | 9.3 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 9.2 | GO:0004197 | cysteine-type endopeptidase activity(GO:0004197) |
0.3 | 9.0 | GO:0048306 | calcium-dependent protein binding(GO:0048306) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 21.3 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.5 | 7.6 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.4 | 7.5 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 5.6 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 5.3 | SIG BCR SIGNALING PATHWAY | Members of the BCR signaling pathway |
0.2 | 4.4 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
0.2 | 3.2 | PID ALK2 PATHWAY | ALK2 signaling events |
0.2 | 3.0 | PID CONE PATHWAY | Visual signal transduction: Cones |
0.1 | 3.0 | PID ENDOTHELIN PATHWAY | Endothelins |
0.1 | 2.9 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 12.1 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.3 | 7.4 | REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT | Genes involved in ABC-family proteins mediated transport |
0.3 | 7.3 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
1.0 | 6.9 | REACTOME INFLAMMASOMES | Genes involved in Inflammasomes |
0.5 | 6.9 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.2 | 6.8 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.5 | 6.4 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
0.6 | 6.2 | REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT | Genes involved in Chylomicron-mediated lipid transport |
0.1 | 5.9 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
0.7 | 5.5 | REACTOME PYRIMIDINE CATABOLISM | Genes involved in Pyrimidine catabolism |