PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
zic1 | dr11_v1_chr24_-_4973765_4973765 | 0.64 | 5.4e-12 | Click! |
si:dkey-149i17.7 | dr11_v1_chr2_+_24885987_24885987 | 0.03 | 7.7e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_24699985 Show fit | 12.53 |
ENSDART00000052802
|
calbindin 2b |
|
chr23_-_46217134 Show fit | 10.56 |
ENSDART00000189477
ENSDART00000168352 |
|
|
chr16_-_27640995 Show fit | 10.25 |
ENSDART00000019658
|
NAC alpha domain containing |
|
chr14_-_51855047 Show fit | 10.18 |
ENSDART00000088912
|
complexin 1 |
|
chr22_+_5106751 Show fit | 9.70 |
ENSDART00000138967
|
ataxia, cerebellar, Cayman type a |
|
chr13_+_27314795 Show fit | 9.40 |
ENSDART00000128726
|
eukaryotic translation elongation factor 1 alpha 1a |
|
chr24_-_3419998 Show fit | 9.28 |
ENSDART00000066839
|
solute carrier family 35, member G2b |
|
chr3_+_24482999 Show fit | 9.04 |
ENSDART00000059179
|
neuronal pentraxin receptor a |
|
chr25_-_29134654 Show fit | 8.66 |
ENSDART00000067066
|
poly (ADP-ribose) polymerase family, member 6b |
|
chr13_-_226393 Show fit | 8.62 |
ENSDART00000172677
|
reticulon 4b |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.1 | 16.2 | GO:0021557 | oculomotor nerve development(GO:0021557) |
1.4 | 15.6 | GO:0015014 | heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process(GO:0015014) |
0.6 | 13.2 | GO:0007274 | neuromuscular synaptic transmission(GO:0007274) |
3.1 | 12.5 | GO:0099509 | regulation of presynaptic cytosolic calcium ion concentration(GO:0099509) regulation of long-term synaptic potentiation(GO:1900271) |
0.1 | 11.4 | GO:0046839 | phospholipid dephosphorylation(GO:0046839) |
0.1 | 10.3 | GO:0006612 | protein targeting to membrane(GO:0006612) |
0.9 | 9.7 | GO:0006798 | polyphosphate metabolic process(GO:0006797) polyphosphate catabolic process(GO:0006798) |
0.3 | 9.4 | GO:0099645 | protein localization to postsynaptic specialization membrane(GO:0099633) neurotransmitter receptor localization to postsynaptic specialization membrane(GO:0099645) |
0.3 | 9.3 | GO:0000132 | establishment of mitotic spindle orientation(GO:0000132) |
0.2 | 8.7 | GO:0006471 | protein ADP-ribosylation(GO:0006471) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 16.8 | GO:0005789 | endoplasmic reticulum membrane(GO:0005789) |
0.5 | 12.5 | GO:0043195 | terminal bouton(GO:0043195) |
0.0 | 11.0 | GO:0031012 | extracellular matrix(GO:0031012) |
1.7 | 10.3 | GO:0005854 | nascent polypeptide-associated complex(GO:0005854) |
0.2 | 9.4 | GO:0098839 | postsynaptic density membrane(GO:0098839) postsynaptic specialization membrane(GO:0099634) |
0.0 | 8.8 | GO:0045202 | synapse(GO:0045202) |
0.3 | 8.0 | GO:0035371 | microtubule plus-end(GO:0035371) |
0.0 | 8.0 | GO:0000139 | Golgi membrane(GO:0000139) |
0.2 | 6.5 | GO:0098831 | cytoskeleton of presynaptic active zone(GO:0048788) presynaptic active zone cytoplasmic component(GO:0098831) |
0.3 | 6.2 | GO:0046658 | anchored component of plasma membrane(GO:0046658) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 27.8 | GO:0005509 | calcium ion binding(GO:0005509) |
2.0 | 15.6 | GO:0015016 | [heparan sulfate]-glucosamine N-sulfotransferase activity(GO:0015016) |
0.4 | 11.4 | GO:0042577 | lipid phosphatase activity(GO:0042577) |
0.1 | 10.8 | GO:0051082 | unfolded protein binding(GO:0051082) |
0.9 | 9.7 | GO:0004309 | exopolyphosphatase activity(GO:0004309) |
0.2 | 8.7 | GO:0003950 | NAD+ ADP-ribosyltransferase activity(GO:0003950) |
0.2 | 8.0 | GO:0051010 | microtubule plus-end binding(GO:0051010) |
0.2 | 7.8 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
0.5 | 7.7 | GO:0003873 | 6-phosphofructo-2-kinase activity(GO:0003873) |
0.7 | 7.1 | GO:0016805 | dipeptidase activity(GO:0016805) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.1 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 7.0 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.4 | 6.6 | PID S1P S1P2 PATHWAY | S1P2 pathway |
0.3 | 5.1 | PID SYNDECAN 3 PATHWAY | Syndecan-3-mediated signaling events |
0.2 | 4.3 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.2 | 1.8 | PID RET PATHWAY | Signaling events regulated by Ret tyrosine kinase |
0.1 | 1.3 | PID FAK PATHWAY | Signaling events mediated by focal adhesion kinase |
0.0 | 1.3 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 1.2 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
0.0 | 0.9 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 9.8 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.6 | 8.1 | REACTOME SIGNAL ATTENUATION | Genes involved in Signal attenuation |
0.9 | 6.6 | REACTOME CD28 DEPENDENT VAV1 PATHWAY | Genes involved in CD28 dependent Vav1 pathway |
0.2 | 6.6 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.1 | 6.3 | REACTOME MHC CLASS II ANTIGEN PRESENTATION | Genes involved in MHC class II antigen presentation |
0.3 | 5.1 | REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS | Genes involved in Proteolytic cleavage of SNARE complex proteins |
0.3 | 4.4 | REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS | Genes involved in Ionotropic activity of Kainate Receptors |
0.1 | 4.3 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.5 | 4.1 | REACTOME RAP1 SIGNALLING | Genes involved in Rap1 signalling |
0.0 | 4.1 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |