PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
si:dkey-18a10.3 | dr11_v1_chr10_-_33572441_33572441 | -0.28 | 6.3e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr20_-_53996193 Show fit | 22.65 |
ENSDART00000004756
|
heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 |
|
chr21_+_20383837 Show fit | 14.91 |
ENSDART00000026430
|
heat shock protein, alpha-crystallin-related, b11 |
|
chr13_+_24834199 Show fit | 14.55 |
ENSDART00000101274
|
zgc:153981 |
|
chr15_+_6109861 Show fit | 12.05 |
ENSDART00000185154
|
Purkinje cell protein 4 |
|
chr9_+_44431174 Show fit | 12.04 |
ENSDART00000149726
|
protein phosphatase 1, regulatory (inhibitor) subunit 1C |
|
chr16_+_34523515 Show fit | 11.80 |
ENSDART00000041007
|
stathmin 1b |
|
chr16_-_6821927 Show fit | 9.41 |
ENSDART00000149070
ENSDART00000149570 |
myelin basic protein b |
|
chr7_+_29955368 Show fit | 9.38 |
ENSDART00000173686
|
alpha-tropomyosin |
|
chr7_+_29954709 Show fit | 9.30 |
ENSDART00000173904
|
alpha-tropomyosin |
|
chr15_-_37850969 Show fit | 9.20 |
ENSDART00000031418
|
heat shock cognate 70 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
5.7 | 22.7 | GO:0045429 | regulation of nitric oxide biosynthetic process(GO:0045428) positive regulation of nitric oxide biosynthetic process(GO:0045429) positive regulation of reactive oxygen species biosynthetic process(GO:1903428) positive regulation of nitric oxide metabolic process(GO:1904407) |
0.7 | 14.9 | GO:0031033 | myosin filament organization(GO:0031033) |
0.0 | 13.6 | GO:0006470 | protein dephosphorylation(GO:0006470) |
0.2 | 11.8 | GO:0007019 | microtubule depolymerization(GO:0007019) |
0.0 | 11.6 | GO:0030198 | extracellular matrix organization(GO:0030198) extracellular structure organization(GO:0043062) |
0.3 | 11.5 | GO:0061077 | chaperone-mediated protein folding(GO:0061077) |
0.1 | 10.7 | GO:0061515 | myeloid cell development(GO:0061515) |
2.6 | 7.8 | GO:0043553 | negative regulation of phosphatidylinositol 3-kinase activity(GO:0043553) negative regulation of lipid kinase activity(GO:0090219) |
2.5 | 7.6 | GO:0061178 | insulin secretion involved in cellular response to glucose stimulus(GO:0035773) regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0061178) |
0.0 | 7.1 | GO:0034765 | regulation of ion transmembrane transport(GO:0034765) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 32.1 | GO:0043209 | myelin sheath(GO:0043209) |
0.2 | 21.9 | GO:0005884 | actin filament(GO:0005884) |
0.0 | 8.9 | GO:0043005 | neuron projection(GO:0043005) |
0.0 | 7.6 | GO:0000785 | chromatin(GO:0000785) |
0.4 | 6.7 | GO:0030285 | integral component of synaptic vesicle membrane(GO:0030285) intrinsic component of synaptic vesicle membrane(GO:0098563) |
0.0 | 5.8 | GO:0031012 | extracellular matrix(GO:0031012) |
0.1 | 5.6 | GO:0008305 | integrin complex(GO:0008305) |
0.1 | 5.3 | GO:0005882 | intermediate filament(GO:0005882) |
0.4 | 5.2 | GO:0031588 | nucleotide-activated protein kinase complex(GO:0031588) |
0.2 | 5.2 | GO:0035371 | microtubule plus-end(GO:0035371) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 26.4 | GO:0051082 | unfolded protein binding(GO:0051082) |
0.6 | 23.7 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
0.0 | 18.9 | GO:0015631 | tubulin binding(GO:0015631) |
0.1 | 16.1 | GO:0042803 | protein homodimerization activity(GO:0042803) |
0.2 | 14.5 | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity(GO:0008138) |
0.6 | 9.4 | GO:0019911 | structural constituent of myelin sheath(GO:0019911) |
0.1 | 7.3 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.3 | 6.8 | GO:0048185 | activin binding(GO:0048185) |
0.3 | 6.8 | GO:0031492 | nucleosomal DNA binding(GO:0031492) |
0.1 | 6.0 | GO:0031490 | chromatin DNA binding(GO:0031490) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 14.8 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.2 | 7.4 | NABA COLLAGENS | Genes encoding collagen proteins |
0.2 | 6.5 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.2 | 3.6 | ST MYOCYTE AD PATHWAY | Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway. |
0.1 | 3.1 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.1 | 2.9 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.1 | 2.9 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 2.9 | NABA CORE MATRISOME | Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans |
0.2 | 2.7 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.1 | 2.6 | PID BARD1 PATHWAY | BARD1 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 7.4 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.6 | 6.5 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.1 | 5.6 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |
0.1 | 5.2 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.1 | 3.5 | REACTOME NETRIN1 SIGNALING | Genes involved in Netrin-1 signaling |
0.5 | 3.3 | REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS | Genes involved in Facilitative Na+-independent glucose transporters |
0.0 | 2.7 | REACTOME CELL JUNCTION ORGANIZATION | Genes involved in Cell junction organization |
0.2 | 2.5 | REACTOME SLBP DEPENDENT PROCESSING OF REPLICATION DEPENDENT HISTONE PRE MRNAS | Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs |
0.1 | 2.3 | REACTOME FANCONI ANEMIA PATHWAY | Genes involved in Fanconi Anemia pathway |
0.0 | 2.3 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |