PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
zbtb14 | dr11_v1_chr24_+_41989108_41989108 | 0.43 | 1.4e-05 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_25649626 Show fit | 83.69 |
ENSDART00000146947
|
tachykinin 1 |
|
chr16_-_43026273 Show fit | 55.56 |
ENSDART00000156820
ENSDART00000189080 |
si:dkey-7j14.5 |
|
chr23_+_44732863 Show fit | 51.37 |
ENSDART00000160044
ENSDART00000172268 |
ATPase Na+/K+ transporting subunit beta 2a |
|
chr16_-_43025885 Show fit | 45.98 |
ENSDART00000193146
ENSDART00000157302 |
si:dkey-7j14.5 |
|
chr1_-_56223913 Show fit | 44.95 |
ENSDART00000019573
|
zgc:65894 |
|
chr21_+_11468934 Show fit | 43.39 |
ENSDART00000126045
ENSDART00000129744 ENSDART00000102368 |
glutamate receptor, ionotropic, N-methyl D-aspartate 1a |
|
chr4_+_5741733 Show fit | 42.50 |
ENSDART00000110243
|
POU class 3 homeobox 2a |
|
chr3_-_21280373 Show fit | 42.00 |
ENSDART00000003939
|
synaptogyrin 1a |
|
chr22_-_21150845 Show fit | 41.08 |
ENSDART00000027345
|
transmembrane protein 59-like |
|
chr25_+_21324588 Show fit | 40.65 |
ENSDART00000151842
|
leucine rich repeat neuronal 3a |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.9 | 98.8 | GO:0046928 | regulation of neurotransmitter secretion(GO:0046928) |
2.3 | 93.8 | GO:0046847 | filopodium assembly(GO:0046847) |
1.9 | 92.9 | GO:0036269 | swimming behavior(GO:0036269) |
16.7 | 83.7 | GO:0007217 | tachykinin receptor signaling pathway(GO:0007217) |
4.1 | 73.4 | GO:0035235 | ionotropic glutamate receptor signaling pathway(GO:0035235) |
0.3 | 51.6 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
2.7 | 51.4 | GO:0036376 | cellular potassium ion homeostasis(GO:0030007) sodium ion export from cell(GO:0036376) sodium ion export(GO:0071436) |
3.2 | 50.6 | GO:0008053 | mitochondrial fusion(GO:0008053) |
0.3 | 49.3 | GO:0048675 | axon extension(GO:0048675) |
0.6 | 45.7 | GO:0046839 | phospholipid dephosphorylation(GO:0046839) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 146.9 | GO:0016020 | membrane(GO:0016020) |
0.1 | 81.2 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
0.4 | 78.4 | GO:0034703 | cation channel complex(GO:0034703) |
0.2 | 70.3 | GO:0000139 | Golgi membrane(GO:0000139) |
1.6 | 69.7 | GO:0032281 | AMPA glutamate receptor complex(GO:0032281) |
1.4 | 64.9 | GO:0042734 | presynaptic membrane(GO:0042734) |
2.6 | 64.1 | GO:0031594 | neuromuscular junction(GO:0031594) |
4.1 | 61.8 | GO:0017146 | NMDA selective glutamate receptor complex(GO:0017146) |
0.5 | 61.4 | GO:0099572 | postsynaptic specialization(GO:0099572) |
2.4 | 58.9 | GO:0043195 | terminal bouton(GO:0043195) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
27.9 | 83.7 | GO:0031835 | neurokinin receptor binding(GO:0031834) substance P receptor binding(GO:0031835) |
0.2 | 81.8 | GO:0005096 | GTPase activator activity(GO:0005096) |
4.6 | 69.7 | GO:0004971 | AMPA glutamate receptor activity(GO:0004971) |
3.1 | 61.8 | GO:0004972 | NMDA glutamate receptor activity(GO:0004972) |
0.1 | 61.1 | GO:0005509 | calcium ion binding(GO:0005509) |
0.0 | 60.2 | GO:0000978 | RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978) |
2.4 | 54.7 | GO:0015279 | store-operated calcium channel activity(GO:0015279) |
2.6 | 51.4 | GO:0001671 | ATPase activator activity(GO:0001671) |
0.4 | 50.5 | GO:0005516 | calmodulin binding(GO:0005516) |
0.1 | 50.5 | GO:0003924 | GTPase activity(GO:0003924) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.0 | 63.6 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
1.0 | 36.6 | PID AURORA B PATHWAY | Aurora B signaling |
0.7 | 30.6 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.6 | 23.2 | PID ILK PATHWAY | Integrin-linked kinase signaling |
1.1 | 15.2 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.4 | 15.0 | PID ATF2 PATHWAY | ATF-2 transcription factor network |
0.3 | 15.0 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.8 | 13.7 | PID IL8 CXCR1 PATHWAY | IL8- and CXCR1-mediated signaling events |
0.3 | 9.0 | PID PI3K PLC TRK PATHWAY | Trk receptor signaling mediated by PI3K and PLC-gamma |
0.3 | 8.4 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.3 | 101.3 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
2.3 | 39.1 | REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS | Genes involved in Proteolytic cleavage of SNARE complex proteins |
4.1 | 36.6 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
1.6 | 30.6 | REACTOME INSULIN SYNTHESIS AND PROCESSING | Genes involved in Insulin Synthesis and Processing |
0.3 | 25.2 | REACTOME TRANSMISSION ACROSS CHEMICAL SYNAPSES | Genes involved in Transmission across Chemical Synapses |
1.3 | 19.3 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.2 | 18.4 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.2 | 13.8 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
1.5 | 13.7 | REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE | Genes involved in Regulation of Insulin Secretion by Acetylcholine |
0.9 | 11.7 | REACTOME AMINE LIGAND BINDING RECEPTORS | Genes involved in Amine ligand-binding receptors |