PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
zbtb47b | dr11_v1_chr24_-_20599781_20599880 | -0.59 | 3.7e-10 | Click! |
znf652 | dr11_v1_chr3_+_15773991_15773991 | -0.57 | 2.9e-09 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr16_+_23913943 Show fit | 46.68 |
ENSDART00000175404
ENSDART00000129525 |
apolipoprotein A-IV b, tandem duplicate 1 |
|
chr21_+_27416284 Show fit | 33.26 |
ENSDART00000077593
ENSDART00000108763 |
complement factor B |
|
chr16_-_31661536 Show fit | 32.29 |
ENSDART00000169973
|
wu:fd46c06 |
|
chr13_-_18637244 Show fit | 26.08 |
ENSDART00000057869
|
methionine adenosyltransferase I, alpha |
|
chr22_-_36856405 Show fit | 24.65 |
ENSDART00000029588
|
kininogen 1 |
|
chr5_+_37978501 Show fit | 23.85 |
ENSDART00000012050
|
apolipoprotein A-Ia |
|
chr16_-_31675669 Show fit | 23.10 |
ENSDART00000168848
ENSDART00000158331 |
complement component 1, r subcomponent |
|
chr3_-_54544612 Show fit | 20.78 |
ENSDART00000018044
|
angiopoietin-like 6 |
|
chr16_-_22294265 Show fit | 20.65 |
ENSDART00000124718
|
aquaporin 10a |
|
chr5_-_69948099 Show fit | 20.09 |
ENSDART00000034639
ENSDART00000191111 |
UDP glucuronosyltransferase 2 family, polypeptide A4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 48.4 | GO:0006749 | glutathione metabolic process(GO:0006749) |
0.5 | 46.2 | GO:0006956 | complement activation(GO:0006956) |
0.3 | 45.2 | GO:0042157 | lipoprotein metabolic process(GO:0042157) |
0.4 | 42.9 | GO:0071466 | cellular response to xenobiotic stimulus(GO:0071466) |
0.5 | 32.3 | GO:0007596 | blood coagulation(GO:0007596) |
3.7 | 26.1 | GO:0006556 | S-adenosylmethionine biosynthetic process(GO:0006556) |
3.5 | 24.7 | GO:1900047 | negative regulation of blood coagulation(GO:0030195) negative regulation of hemostasis(GO:1900047) |
4.8 | 23.9 | GO:0010872 | regulation of cholesterol esterification(GO:0010872) positive regulation of cholesterol esterification(GO:0010873) |
0.4 | 23.7 | GO:0031638 | zymogen activation(GO:0031638) |
4.2 | 16.9 | GO:0015722 | canalicular bile acid transport(GO:0015722) bile acid secretion(GO:0032782) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 161.9 | GO:0005576 | extracellular region(GO:0005576) |
0.1 | 51.6 | GO:0005783 | endoplasmic reticulum(GO:0005783) |
1.8 | 23.9 | GO:0042627 | chylomicron(GO:0042627) |
0.4 | 23.7 | GO:0005811 | lipid particle(GO:0005811) |
0.2 | 10.9 | GO:0005777 | peroxisome(GO:0005777) microbody(GO:0042579) |
0.1 | 8.8 | GO:0031201 | SNARE complex(GO:0031201) |
0.1 | 8.7 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
2.0 | 8.0 | GO:0043540 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex(GO:0043540) |
0.2 | 7.2 | GO:0031903 | peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903) |
0.1 | 6.1 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 93.4 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.0 | 58.7 | GO:0001012 | RNA polymerase II regulatory region sequence-specific DNA binding(GO:0000977) RNA polymerase II regulatory region DNA binding(GO:0001012) |
1.4 | 48.4 | GO:0004364 | glutathione transferase activity(GO:0004364) |
0.1 | 35.9 | GO:0008289 | lipid binding(GO:0008289) |
0.2 | 32.2 | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors(GO:0016614) |
6.5 | 26.1 | GO:0004478 | methionine adenosyltransferase activity(GO:0004478) |
2.7 | 24.7 | GO:0004499 | N,N-dimethylaniline monooxygenase activity(GO:0004499) |
0.6 | 24.7 | GO:0004869 | cysteine-type endopeptidase inhibitor activity(GO:0004869) |
0.3 | 24.1 | GO:0008395 | steroid hydroxylase activity(GO:0008395) |
4.8 | 23.9 | GO:0060228 | phosphatidylcholine-sterol O-acyltransferase activator activity(GO:0060228) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.8 | 33.3 | ST G ALPHA S PATHWAY | G alpha s Pathway |
1.9 | 24.7 | PID SYNDECAN 2 PATHWAY | Syndecan-2-mediated signaling events |
0.1 | 19.6 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.1 | 19.5 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.2 | 3.9 | PID ALK1 PATHWAY | ALK1 signaling events |
0.1 | 3.9 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.2 | 3.6 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.5 | 2.4 | ST INTERFERON GAMMA PATHWAY | Interferon gamma pathway. |
0.0 | 2.2 | NABA MATRISOME ASSOCIATED | Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors |
0.1 | 1.7 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
8.3 | 33.3 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |
1.0 | 26.1 | REACTOME PHASE II CONJUGATION | Genes involved in Phase II conjugation |
1.6 | 24.7 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
1.8 | 9.0 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
1.1 | 9.0 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.4 | 8.0 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.5 | 6.7 | REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION | Genes involved in GABA synthesis, release, reuptake and degradation |
0.6 | 6.3 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |
0.1 | 5.9 | REACTOME PRE NOTCH EXPRESSION AND PROCESSING | Genes involved in Pre-NOTCH Expression and Processing |
0.2 | 5.5 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |