PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
zgc:101100 | dr11_v1_chr8_+_20488322_20488322 | 0.63 | 1.0e-11 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr25_+_3326885 Show fit | 5.80 |
ENSDART00000104866
|
lactate dehydrogenase Bb |
|
chr3_-_49566364 Show fit | 5.62 |
ENSDART00000161507
|
zgc:153426 |
|
chr2_-_30784198 Show fit | 5.22 |
ENSDART00000182523
ENSDART00000147355 |
regulator of G protein signaling 20 |
|
chr20_-_29475172 Show fit | 4.92 |
ENSDART00000183164
|
secretogranin V |
|
chr12_+_41991635 Show fit | 4.92 |
ENSDART00000186161
ENSDART00000192510 |
transcription elongation regulator 1 like |
|
chr24_-_38079261 Show fit | 4.72 |
ENSDART00000105662
|
C-reactive protein 1 |
|
chr22_+_5103349 Show fit | 4.63 |
ENSDART00000083474
|
ataxia, cerebellar, Cayman type a |
|
chr20_-_18736281 Show fit | 4.48 |
ENSDART00000142837
|
ectonucleotide pyrophosphatase/phosphodiesterase 5 |
|
chr20_+_53441935 Show fit | 4.01 |
ENSDART00000175214
|
apolipoprotein Bb, tandem duplicate 2 |
|
chr16_+_32059785 Show fit | 3.93 |
ENSDART00000134459
|
si:dkey-40m6.8 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.9 | GO:0046883 | regulation of hormone secretion(GO:0046883) |
0.4 | 4.6 | GO:0006798 | polyphosphate metabolic process(GO:0006797) polyphosphate catabolic process(GO:0006798) |
0.1 | 4.3 | GO:0042149 | cellular response to glucose starvation(GO:0042149) |
0.8 | 4.0 | GO:0006642 | triglyceride mobilization(GO:0006642) |
0.1 | 3.8 | GO:0046928 | regulation of neurotransmitter secretion(GO:0046928) |
0.7 | 3.7 | GO:0036371 | protein localization to T-tubule(GO:0036371) |
0.2 | 3.4 | GO:0046470 | phosphatidylcholine metabolic process(GO:0046470) |
0.1 | 3.4 | GO:0031638 | zymogen activation(GO:0031638) |
0.0 | 3.4 | GO:1902600 | hydrogen ion transmembrane transport(GO:1902600) |
0.0 | 3.2 | GO:0060027 | convergent extension involved in gastrulation(GO:0060027) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.9 | GO:0031514 | motile cilium(GO:0031514) |
0.8 | 4.0 | GO:0034359 | mature chylomicron(GO:0034359) |
0.0 | 3.8 | GO:0099501 | synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501) |
0.0 | 3.8 | GO:0005813 | centrosome(GO:0005813) |
0.2 | 3.7 | GO:0030315 | T-tubule(GO:0030315) |
0.0 | 3.6 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
0.2 | 3.4 | GO:0033179 | proton-transporting V-type ATPase, V0 domain(GO:0033179) |
0.1 | 2.2 | GO:0035869 | ciliary transition zone(GO:0035869) |
0.1 | 1.9 | GO:0002102 | podosome(GO:0002102) |
0.1 | 1.6 | GO:0002116 | semaphorin receptor complex(GO:0002116) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 5.8 | GO:0004459 | L-lactate dehydrogenase activity(GO:0004459) |
0.4 | 4.6 | GO:0004309 | exopolyphosphatase activity(GO:0004309) |
0.1 | 4.2 | GO:0005347 | ATP transmembrane transporter activity(GO:0005347) |
0.4 | 4.0 | GO:0050750 | low-density lipoprotein particle receptor binding(GO:0050750) lipoprotein particle receptor binding(GO:0070325) |
0.2 | 3.8 | GO:0050321 | tau-protein kinase activity(GO:0050321) |
0.2 | 3.7 | GO:0004190 | aspartic-type endopeptidase activity(GO:0004190) aspartic-type peptidase activity(GO:0070001) |
0.2 | 3.4 | GO:0004622 | lysophospholipase activity(GO:0004622) |
0.0 | 3.4 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
1.0 | 3.1 | GO:0004421 | hydroxymethylglutaryl-CoA synthase activity(GO:0004421) |
0.1 | 2.8 | GO:0004089 | carbonate dehydratase activity(GO:0004089) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.2 | ST G ALPHA I PATHWAY | G alpha i Pathway |
0.1 | 3.1 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 1.7 | PID LKB1 PATHWAY | LKB1 signaling events |
0.1 | 1.1 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.2 | REACTOME G ALPHA Z SIGNALLING EVENTS | Genes involved in G alpha (z) signalling events |
0.1 | 3.1 | REACTOME CHOLESTEROL BIOSYNTHESIS | Genes involved in Cholesterol biosynthesis |
0.2 | 1.7 | REACTOME REGULATION OF AMPK ACTIVITY VIA LKB1 | Genes involved in Regulation of AMPK activity via LKB1 |
0.1 | 1.3 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.2 | 1.2 | REACTOME TETRAHYDROBIOPTERIN BH4 SYNTHESIS RECYCLING SALVAGE AND REGULATION | Genes involved in Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation |
0.0 | 1.1 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.1 | 1.0 | REACTOME TRANSFERRIN ENDOCYTOSIS AND RECYCLING | Genes involved in Transferrin endocytosis and recycling |
0.0 | 0.6 | REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING | Genes involved in Negative regulators of RIG-I/MDA5 signaling |