PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
CABZ01066694.1 | dr11_v1_chr6_+_168962_168962 | 0.55 | 1.5e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr15_+_6109861 Show fit | 2.10 |
ENSDART00000185154
|
Purkinje cell protein 4 |
|
chr19_+_37509638 Show fit | 2.04 |
ENSDART00000139999
|
si:ch211-250g4.3 |
|
chr7_-_38638809 Show fit | 1.82 |
ENSDART00000144341
|
six-cysteine containing astacin protease 4 |
|
chr2_-_54054225 Show fit | 1.59 |
ENSDART00000167239
|
|
|
chr9_-_22205682 Show fit | 1.58 |
ENSDART00000101869
|
crystallin, gamma M2d12 |
|
chr20_+_33981946 Show fit | 1.28 |
ENSDART00000131775
|
si:dkey-51e6.1 |
|
chr1_-_58766424 Show fit | 1.24 |
ENSDART00000191010
|
|
|
chr6_+_41038757 Show fit | 1.17 |
ENSDART00000011245
|
ectonucleoside triphosphate diphosphohydrolase 8 |
|
chr2_-_32768951 Show fit | 1.12 |
ENSDART00000004712
|
beaded filament structural protein 2, phakinin |
|
chr2_-_56635744 Show fit | 0.85 |
ENSDART00000167790
ENSDART00000168160 |
phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.6 | GO:0002088 | lens development in camera-type eye(GO:0002088) |
0.4 | 1.3 | GO:0035971 | peptidyl-histidine dephosphorylation(GO:0035971) |
0.1 | 1.3 | GO:0042759 | long-chain fatty acid biosynthetic process(GO:0042759) |
0.1 | 1.2 | GO:0009134 | nucleoside diphosphate catabolic process(GO:0009134) |
0.0 | 1.1 | GO:0045104 | intermediate filament-based process(GO:0045103) intermediate filament cytoskeleton organization(GO:0045104) |
0.0 | 1.0 | GO:0035622 | intrahepatic bile duct development(GO:0035622) |
0.0 | 0.9 | GO:0045332 | phospholipid translocation(GO:0045332) |
0.2 | 0.8 | GO:0006531 | aspartate metabolic process(GO:0006531) |
0.2 | 0.7 | GO:0003242 | growth involved in heart morphogenesis(GO:0003241) cardiac chamber ballooning(GO:0003242) cardiac muscle tissue growth involved in heart morphogenesis(GO:0003245) |
0.1 | 0.6 | GO:0006651 | diacylglycerol biosynthetic process(GO:0006651) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 0.6 | GO:0031588 | nucleotide-activated protein kinase complex(GO:0031588) |
0.0 | 0.6 | GO:0034361 | very-low-density lipoprotein particle(GO:0034361) |
0.0 | 0.5 | GO:0000792 | heterochromatin(GO:0000792) |
0.0 | 0.5 | GO:0012507 | ER to Golgi transport vesicle membrane(GO:0012507) |
0.0 | 0.4 | GO:0045277 | respiratory chain complex IV(GO:0045277) |
0.0 | 0.3 | GO:0005671 | Ada2/Gcn5/Ada3 transcription activator complex(GO:0005671) |
0.0 | 0.3 | GO:0005579 | membrane attack complex(GO:0005579) |
0.0 | 0.3 | GO:0043195 | terminal bouton(GO:0043195) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.9 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.0 | 1.6 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.3 | 1.3 | GO:0101006 | protein histidine phosphatase activity(GO:0101006) |
0.1 | 1.3 | GO:0016405 | CoA-ligase activity(GO:0016405) |
0.1 | 1.2 | GO:0004382 | guanosine-diphosphatase activity(GO:0004382) uridine-diphosphatase activity(GO:0045134) |
0.2 | 0.8 | GO:0004069 | L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069) |
0.1 | 0.8 | GO:0033691 | sialic acid binding(GO:0033691) |
0.0 | 0.8 | GO:0016307 | phosphatidylinositol phosphate kinase activity(GO:0016307) |
0.2 | 0.7 | GO:0004653 | polypeptide N-acetylgalactosaminyltransferase activity(GO:0004653) |
0.0 | 0.7 | GO:0015379 | cation:chloride symporter activity(GO:0015377) potassium:chloride symporter activity(GO:0015379) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | ST JNK MAPK PATHWAY | JNK MAPK Pathway |
0.0 | 0.8 | PID P75 NTR PATHWAY | p75(NTR)-mediated signaling |
0.0 | 0.6 | PID REELIN PATHWAY | Reelin signaling pathway |
0.0 | 0.5 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
0.0 | 0.2 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.9 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.0 | 0.8 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.0 | 0.7 | REACTOME REGULATION OF WATER BALANCE BY RENAL AQUAPORINS | Genes involved in Regulation of Water Balance by Renal Aquaporins |
0.0 | 0.5 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.0 | 0.3 | REACTOME AMINE LIGAND BINDING RECEPTORS | Genes involved in Amine ligand-binding receptors |
0.0 | 0.3 | REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE | Genes involved in Reversible Hydration of Carbon Dioxide |
0.0 | 0.3 | REACTOME PEROXISOMAL LIPID METABOLISM | Genes involved in Peroxisomal lipid metabolism |
0.0 | 0.1 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |