PRJEB1986: zebrafish developmental stages transcriptome
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr23_-_16485190 Show fit | 1.21 |
ENSDART00000155038
|
si:dkeyp-100a5.4 |
|
chr16_+_54209504 Show fit | 1.11 |
ENSDART00000020033
|
X-ray repair complementing defective repair in Chinese hamster cells 1 |
|
chr20_+_11731039 Show fit | 1.09 |
ENSDART00000152215
ENSDART00000152585 |
si:ch211-155o21.3 |
|
chr21_+_28478663 Show fit | 0.95 |
ENSDART00000077887
ENSDART00000134150 |
solute carrier family 22 (organic anion transporter), member 6, like |
|
chr3_-_19368435 Show fit | 0.89 |
ENSDART00000132987
|
sphingosine-1-phosphate receptor 5a |
|
chr17_+_8799661 Show fit | 0.86 |
ENSDART00000105326
|
tonsoku-like, DNA repair protein |
|
chr6_-_58764672 Show fit | 0.77 |
ENSDART00000154322
|
sterol O-acyltransferase 2 |
|
chr8_-_30204650 Show fit | 0.76 |
ENSDART00000133209
|
zgc:162939 |
|
chr20_+_40457599 Show fit | 0.73 |
ENSDART00000017553
|
serine incorporator 1 |
|
chr6_+_7533601 Show fit | 0.72 |
ENSDART00000057823
|
proliferation-associated 2G4, a |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 1.8 | GO:0000012 | single strand break repair(GO:0000012) |
0.0 | 1.4 | GO:0032355 | response to estradiol(GO:0032355) |
0.0 | 0.9 | GO:0031297 | replication fork processing(GO:0031297) |
0.1 | 0.8 | GO:0034434 | steroid esterification(GO:0034433) sterol esterification(GO:0034434) cholesterol esterification(GO:0034435) |
0.1 | 0.7 | GO:0006048 | UDP-N-acetylglucosamine biosynthetic process(GO:0006048) |
0.0 | 0.7 | GO:0006658 | phosphatidylserine metabolic process(GO:0006658) |
0.0 | 0.7 | GO:0000727 | double-strand break repair via break-induced replication(GO:0000727) |
0.2 | 0.6 | GO:0019532 | oxalate transport(GO:0019532) |
0.0 | 0.6 | GO:0035338 | long-chain fatty-acyl-CoA biosynthetic process(GO:0035338) |
0.0 | 0.6 | GO:0042737 | drug metabolic process(GO:0017144) drug catabolic process(GO:0042737) exogenous drug catabolic process(GO:0042738) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.9 | GO:0005662 | DNA replication factor A complex(GO:0005662) |
0.1 | 0.6 | GO:0005665 | DNA-directed RNA polymerase II, core complex(GO:0005665) |
0.1 | 0.5 | GO:0071818 | BAT3 complex(GO:0071818) |
0.0 | 0.5 | GO:0008541 | proteasome regulatory particle, lid subcomplex(GO:0008541) |
0.0 | 0.5 | GO:0036038 | MKS complex(GO:0036038) |
0.0 | 0.5 | GO:0005689 | U12-type spliceosomal complex(GO:0005689) |
0.0 | 0.3 | GO:0070822 | Sin3-type complex(GO:0070822) |
0.0 | 0.1 | GO:0031673 | H zone(GO:0031673) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.4 | GO:0045735 | nutrient reservoir activity(GO:0045735) |
0.0 | 1.4 | GO:0003684 | damaged DNA binding(GO:0003684) |
0.1 | 0.9 | GO:0038036 | sphingosine-1-phosphate receptor activity(GO:0038036) |
0.2 | 0.8 | GO:0004772 | sterol O-acyltransferase activity(GO:0004772) cholesterol O-acyltransferase activity(GO:0034736) |
0.2 | 0.7 | GO:0070259 | tyrosyl-DNA phosphodiesterase activity(GO:0070259) |
0.1 | 0.7 | GO:0003977 | UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977) |
0.1 | 0.6 | GO:0047676 | arachidonate-CoA ligase activity(GO:0047676) |
0.0 | 0.6 | GO:0019531 | oxalate transmembrane transporter activity(GO:0019531) |
0.1 | 0.5 | GO:0030626 | U12 snRNA binding(GO:0030626) |
0.0 | 0.5 | GO:0009982 | pseudouridine synthase activity(GO:0009982) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.0 | 0.9 | ST TUMOR NECROSIS FACTOR PATHWAY | Tumor Necrosis Factor Pathway. |
0.0 | 0.1 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.1 | REACTOME RESOLUTION OF AP SITES VIA THE SINGLE NUCLEOTIDE REPLACEMENT PATHWAY | Genes involved in Resolution of AP sites via the single-nucleotide replacement pathway |
0.0 | 0.7 | REACTOME DOUBLE STRAND BREAK REPAIR | Genes involved in Double-Strand Break Repair |
0.0 | 0.7 | REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX | Genes involved in Activation of the pre-replicative complex |
0.0 | 0.6 | REACTOME VIRAL MESSENGER RNA SYNTHESIS | Genes involved in Viral Messenger RNA Synthesis |
0.0 | 0.4 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.0 | 0.1 | REACTOME MTORC1 MEDIATED SIGNALLING | Genes involved in mTORC1-mediated signalling |