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PRJEB1986: zebrafish developmental stages transcriptome

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Results for VDR+nr1i2_vdrb

Z-value: 0.71

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Transcription factors associated with VDR+nr1i2_vdrb

Gene Symbol Gene ID Gene Info
ENSDARG00000029766 nuclear receptor subfamily 1, group I, member 2
ENSDARG00000112923 vitamin D receptor
ENSDARG00000070721 vitamin D receptor b
ENSDARG00000114864 vitamin D receptor b

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
nr1i2dr11_v1_chr9_+_9502610_95026100.483.6e-02Click!
vdrbdr11_v1_chr6_-_39006449_39006449-0.253.0e-01Click!
CABZ01088036.1dr11_v1_chr23_+_45785563_45785563-0.077.9e-01Click!

Activity profile of VDR+nr1i2_vdrb motif

1dpf-1 1dpf-2 1dpf-3 1dpf-4 1dpf-5 2dpf-1 2dpf-2 2dpf-3 2dpf-4 3dpf-1 3dpf-2 3dpf-3 3dpf-4 5dpf-1 5dpf-2 5dpf-3 5dpf-4 5dpf-5 14dpf-1 −0.0500.050.1
activity (log2(tpm) per TFBS)

Sorted Z-values of VDR+nr1i2_vdrb motif

−1.5−1−0.500.512dpf-3 2dpf-1 3dpf-1 5dpf-5 5dpf-3 2dpf-4 3dpf-2 3dpf-3 5dpf-2 5dpf-1 3dpf-4 5dpf-4 2dpf-2 1dpf-3 14dpf-1 1dpf-5 1dpf-2 1dpf-4 1dpf-1 
Z-value

Network of associatons between targets according to the STRING database.

First level regulatory network of VDR+nr1i2_vdrb

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: