PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
bhlhe40 | dr11_v1_chr11_-_35763323_35763323 | 0.77 | 1.0e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_54765262 Show fit | 1.55 |
ENSDART00000150362
|
si:ch211-197k17.3 |
|
chr7_+_48999723 Show fit | 1.52 |
ENSDART00000182699
ENSDART00000166329 |
si:ch211-288d18.1 |
|
chr25_-_35599887 Show fit | 1.40 |
ENSDART00000153827
|
caseinolytic mitochondrial matrix peptidase chaperone subunit b |
|
chr4_+_13696537 Show fit | 1.12 |
ENSDART00000109195
ENSDART00000122041 ENSDART00000192554 |
neuronal cell adhesion molecule a |
|
chr10_-_44027391 Show fit | 1.01 |
ENSDART00000145404
|
crystallin, beta B1 |
|
chr10_-_6775271 Show fit | 0.79 |
ENSDART00000110735
|
zgc:194281 |
|
chr16_+_26824691 Show fit | 0.70 |
ENSDART00000135053
|
zmp:0000001316 |
|
chr21_+_43178831 Show fit | 0.63 |
ENSDART00000151512
|
AF4/FMR2 family, member 4 |
|
chr24_+_7631797 Show fit | 0.62 |
ENSDART00000187464
|
caveolae associated protein 1b |
|
chr19_+_40379771 Show fit | 0.61 |
ENSDART00000017917
ENSDART00000110699 |
VPS50 EARP/GARPII complex subunit VPS50 EARP/GARPII complex subunit |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.5 | GO:0090630 | activation of GTPase activity(GO:0090630) |
0.0 | 1.0 | GO:0042147 | retrograde transport, endosome to Golgi(GO:0042147) |
0.2 | 0.9 | GO:0042766 | nucleosome mobilization(GO:0042766) |
0.1 | 0.6 | GO:0006361 | transcription initiation from RNA polymerase I promoter(GO:0006361) |
0.0 | 0.6 | GO:0060999 | positive regulation of dendritic spine development(GO:0060999) |
0.0 | 0.6 | GO:0006749 | glutathione metabolic process(GO:0006749) |
0.0 | 0.6 | GO:0035082 | axoneme assembly(GO:0035082) |
0.0 | 0.5 | GO:0032008 | positive regulation of TOR signaling(GO:0032008) |
0.0 | 0.5 | GO:0072015 | glomerular visceral epithelial cell development(GO:0072015) glomerular epithelial cell development(GO:0072310) |
0.1 | 0.4 | GO:0071470 | cellular response to osmotic stress(GO:0071470) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.9 | GO:0016589 | NURF complex(GO:0016589) |
0.2 | 0.6 | GO:1990745 | EARP complex(GO:1990745) |
0.1 | 0.6 | GO:0032783 | ELL-EAF complex(GO:0032783) |
0.0 | 0.6 | GO:0005901 | caveola(GO:0005901) plasma membrane raft(GO:0044853) |
0.1 | 0.5 | GO:0071203 | WASH complex(GO:0071203) |
0.1 | 0.5 | GO:0071986 | Ragulator complex(GO:0071986) |
0.1 | 0.4 | GO:0044611 | nuclear pore inner ring(GO:0044611) |
0.0 | 0.4 | GO:0005666 | DNA-directed RNA polymerase III complex(GO:0005666) |
0.0 | 0.3 | GO:0000801 | central element(GO:0000801) |
0.1 | 0.2 | GO:0035301 | Hedgehog signaling complex(GO:0035301) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.4 | GO:0051082 | unfolded protein binding(GO:0051082) |
0.0 | 1.0 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.0 | 0.9 | GO:0035064 | methylated histone binding(GO:0035064) |
0.2 | 0.6 | GO:0042134 | rRNA primary transcript binding(GO:0042134) |
0.0 | 0.6 | GO:0016812 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812) |
0.0 | 0.4 | GO:0017056 | structural constituent of nuclear pore(GO:0017056) |
0.0 | 0.4 | GO:0015377 | cation:chloride symporter activity(GO:0015377) potassium:chloride symporter activity(GO:0015379) |
0.0 | 0.4 | GO:0034062 | DNA-directed RNA polymerase activity(GO:0003899) RNA polymerase activity(GO:0034062) |
0.1 | 0.3 | GO:0015218 | pyrimidine nucleotide transmembrane transporter activity(GO:0015218) |
0.0 | 0.3 | GO:0016714 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen(GO:0016714) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | PID RHOA PATHWAY | RhoA signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.6 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 0.4 | REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS | Genes involved in Synthesis of substrates in N-glycan biosythesis |
0.0 | 0.1 | REACTOME INSULIN RECEPTOR RECYCLING | Genes involved in Insulin receptor recycling |