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PRJEB1986: zebrafish developmental stages transcriptome

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Results for clocka+clockb+npas2

Z-value: 2.30

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Transcription factors associated with clocka+clockb+npas2

Gene Symbol Gene ID Gene Info
ENSDARG00000003631 clock circadian regulator b
ENSDARG00000011703 clock circadian regulator a
ENSDARG00000016536 neuronal PAS domain protein 2
ENSDARG00000116993 neuronal PAS domain protein 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
clockadr11_v1_chr20_+_22130284_22130284-0.571.2e-02Click!
clockbdr11_v1_chr1_+_19433004_19433004-0.445.9e-02Click!
npas2dr11_v1_chr5_+_22791686_22791686-0.351.5e-01Click!

Activity profile of clocka+clockb+npas2 motif

1dpf-1 1dpf-2 1dpf-3 1dpf-4 1dpf-5 2dpf-1 2dpf-2 2dpf-3 2dpf-4 3dpf-1 3dpf-2 3dpf-3 3dpf-4 5dpf-1 5dpf-2 5dpf-3 5dpf-4 5dpf-5 14dpf-1 −0.1−0.0500.050.10.15
activity (log2(tpm) per TFBS)

Sorted Z-values of clocka+clockb+npas2 motif

−2−1012342dpf-2 2dpf-1 2dpf-4 2dpf-3 5dpf-5 5dpf-3 5dpf-2 5dpf-1 5dpf-4 3dpf-2 3dpf-3 3dpf-1 3dpf-4 14dpf-1 1dpf-1 1dpf-2 1dpf-3 1dpf-5 1dpf-4 
Z-value

Network of associatons between targets according to the STRING database.

First level regulatory network of clocka+clockb+npas2

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: