PRJEB1986: zebrafish developmental stages transcriptome

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
cux2b Links NCBI UniProt	ENSDARG00000086345	cut-like homeobox 2b

Gene	Promoter	Pearson corr. coef.	P-value	Plot
cux2b	dr11_v1_chr8_-_4327473_4327473	-0.14	5.6e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr19_-_48039400 Show fit	1.54	ENSDART00000166748 ENSDART00000165921	csf3b Links NCBI UniProt Show fit	colony stimulating factor 3 (granulocyte) b
chr2_-_42958619 Show fit	1.24	ENSDART00000144317	oc90 Links NCBI UniProt Show fit	otoconin 90
chr12_-_20340543 Show fit	1.17	ENSDART00000055623	hbbe3 Links NCBI UniProt Show fit	hemoglobin beta embryonic-3
chr7_+_32695954 Show fit	0.92	ENSDART00000184425	slc39a13 Links NCBI UniProt Show fit	solute carrier family 39 (zinc transporter), member 13
chr23_-_45705525 Show fit	0.80	ENSDART00000148959	ednrab Links NCBI UniProt Show fit	endothelin receptor type Ab
chr21_-_34844059 Show fit	0.69	ENSDART00000136402	zgc:56585 Links NCBI UniProt Show fit	zgc:56585
chr1_+_277731 Show fit	0.67	ENSDART00000133431	cenpe Links NCBI UniProt Show fit	centromere protein E
chr16_+_54210554 Show fit	0.66	ENSDART00000172622	xrcc1 Links NCBI UniProt Show fit	X-ray repair complementing defective repair in Chinese hamster cells 1
chr6_-_17999776 Show fit	0.64	ENSDART00000183048 ENSDART00000181577 ENSDART00000170597	rptor Links NCBI UniProt Show fit	regulatory associated protein of MTOR, complex 1
chr19_-_41518922 Show fit	0.63	ENSDART00000164483 ENSDART00000062080	chrac1 Links NCBI UniProt Show fit	chromatin accessibility complex 1
chr3_-_61387273 Show fit	0.63	ENSDART00000156479	znf1143 Links NCBI UniProt Show fit	zinc finger protein 1143
chr16_+_54209504 Show fit	0.63	ENSDART00000020033	xrcc1 Links NCBI UniProt Show fit	X-ray repair complementing defective repair in Chinese hamster cells 1
chr23_+_12454542 Show fit	0.62	ENSDART00000182259 ENSDART00000193043	si:ch211-153a8.4 Links NCBI UniProt Show fit	si:ch211-153a8.4
chr7_-_17297156 Show fit	0.62	ENSDART00000161336	nitr11a Links NCBI UniProt Show fit	novel immune-type receptor 11a
chr17_-_40110782 Show fit	0.59	ENSDART00000126929	si:dkey-187k19.2 Links NCBI UniProt Show fit	si:dkey-187k19.2
chr12_+_16953415 Show fit	0.53	ENSDART00000020824	pank1b Links NCBI UniProt Show fit	pantothenate kinase 1b
chr4_+_5334202 Show fit	0.51	ENSDART00000150409	apex1 Links NCBI UniProt Show fit	APEX nuclease (multifunctional DNA repair enzyme) 1
chr20_-_35246150 Show fit	0.50	ENSDART00000090549	fzd3a Links NCBI UniProt Show fit	frizzled class receptor 3a
chr1_+_292545 Show fit	0.50	ENSDART00000148261	cenpe Links NCBI UniProt Show fit	centromere protein E
chr18_-_14677936 Show fit	0.49	ENSDART00000111995	si:dkey-238o13.4 Links NCBI UniProt Show fit	si:dkey-238o13.4
chr16_+_29509133 Show fit	0.49	ENSDART00000112116	ctss2.1 Links NCBI UniProt Show fit	cathepsin S, ortholog2, tandem duplicate 1
chr21_-_37973819 Show fit	0.49	ENSDART00000133405	ripply1 Links NCBI UniProt Show fit	ripply transcriptional repressor 1
chr13_-_21650404 Show fit	0.49	ENSDART00000078352	tspan14 Links NCBI UniProt Show fit	tetraspanin 14
chr21_-_2261720 Show fit	0.49	ENSDART00000170161	si:ch73-299h12.2 Links NCBI UniProt Show fit	si:ch73-299h12.2
chr4_+_5334439 Show fit	0.48	ENSDART00000180644	apex1 Links NCBI UniProt Show fit	APEX nuclease (multifunctional DNA repair enzyme) 1
chr11_-_35171768 Show fit	0.48	ENSDART00000192896	traip Links NCBI UniProt Show fit	TRAF-interacting protein
chr9_-_55128839 Show fit	0.48	ENSDART00000085135	tbl1x Links NCBI UniProt Show fit	transducin beta like 1 X-linked
chr3_-_61362398 Show fit	0.47	ENSDART00000156177	si:dkey-111k8.3 Links NCBI UniProt Show fit	si:dkey-111k8.3
chr14_-_970853 Show fit	0.46	ENSDART00000130801	acsl1b Links NCBI UniProt Show fit	acyl-CoA synthetase long chain family member 1b
chr22_-_3564563 Show fit	0.46	ENSDART00000145114	ptprsa Links NCBI UniProt Show fit	protein tyrosine phosphatase, receptor type, s, a
chr18_+_44630415 Show fit	0.46	ENSDART00000098540	bicra Links NCBI UniProt Show fit	BRD4 interacting chromatin remodeling complex associated protein
chr9_-_48371379 Show fit	0.46	ENSDART00000115121	col28a2a Links NCBI UniProt Show fit	collagen, type XXVIII, alpha 2a
chr7_+_1579236 Show fit	0.46	ENSDART00000172830	supt16h Links NCBI UniProt Show fit	SPT16 homolog, facilitates chromatin remodeling subunit
chr15_+_29472065 Show fit	0.45	ENSDART00000154343	gdpd5b Links NCBI UniProt Show fit	glycerophosphodiester phosphodiesterase domain containing 5b
chr4_+_27018663 Show fit	0.45	ENSDART00000180778	CR749777.1 Links NCBI UniProt Show fit
chr14_+_52481288 Show fit	0.45	ENSDART00000169164 ENSDART00000159297	tcerg1a Links NCBI UniProt Show fit	transcription elongation regulator 1a (CA150)
chr7_-_16597130 Show fit	0.45	ENSDART00000144118	e2f8 Links NCBI UniProt Show fit	E2F transcription factor 8
chr2_+_45300512 Show fit	0.45	ENSDART00000144704	camsap2b Links NCBI UniProt Show fit	calmodulin regulated spectrin-associated protein family, member 2b
chr25_+_3648497 Show fit	0.45	ENSDART00000160017	CABZ01058261.1 Links NCBI UniProt Show fit
chr21_+_45268112 Show fit	0.45	ENSDART00000157136	tcf7 Links NCBI UniProt Show fit	transcription factor 7
chr17_-_2578026 Show fit	0.45	ENSDART00000065821	zp3.2 Links NCBI UniProt Show fit	zona pellucida glycoprotein 3, tandem duplicate 2
chr22_-_34979139 Show fit	0.44	ENSDART00000116455 ENSDART00000133537	arhgap19 Links NCBI UniProt Show fit	Rho GTPase activating protein 19
chr4_+_288633 Show fit	0.44	ENSDART00000183304	FO834823.1 Links NCBI UniProt Show fit
chr4_+_5334707 Show fit	0.43	ENSDART00000150620	apex1 Links NCBI UniProt Show fit	APEX nuclease (multifunctional DNA repair enzyme) 1
chr25_+_22320738 Show fit	0.43	ENSDART00000073566	cyp11a1 Links NCBI UniProt Show fit	cytochrome P450, family 11, subfamily A, polypeptide 1
chr20_-_16078741 Show fit	0.43	ENSDART00000021550	ralgps2 Links NCBI UniProt Show fit	Ral GEF with PH domain and SH3 binding motif 2
chr21_-_19919918 Show fit	0.42	ENSDART00000137307 ENSDART00000142523 ENSDART00000065670	ppp1r3b Links NCBI UniProt Show fit	protein phosphatase 1, regulatory subunit 3B
chr24_+_38301080 Show fit	0.42	ENSDART00000105672	mybpc2b Links NCBI UniProt Show fit	myosin binding protein C, fast type b
chr1_+_38153944 Show fit	0.42	ENSDART00000135666	galnt7 Links NCBI UniProt Show fit	UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7
chr23_-_43486714 Show fit	0.42	ENSDART00000169726	e2f1 Links NCBI UniProt Show fit	E2F transcription factor 1
chr21_+_38855551 Show fit	0.41	ENSDART00000171977	ddx52 Links NCBI UniProt Show fit	DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
chr23_+_4373360 Show fit	0.41	ENSDART00000144061	ptpdc1b Links NCBI UniProt Show fit	protein tyrosine phosphatase domain containing 1b
chr15_+_11814969 Show fit	0.41	ENSDART00000127248	FO704748.1 Links NCBI UniProt Show fit
chr20_+_21391181 Show fit	0.41	ENSDART00000185158 ENSDART00000049586 ENSDART00000024922	jag2b Links NCBI UniProt Show fit	jagged 2b
chr19_-_10207103 Show fit	0.41	ENSDART00000151629	znf865 Links NCBI UniProt Show fit	zinc finger protein 865
chr7_+_30626378 Show fit	0.41	ENSDART00000173533 ENSDART00000052541	ccnb2 Links NCBI UniProt Show fit	cyclin B2
chr9_+_32073606 Show fit	0.41	ENSDART00000184170 ENSDART00000180355 ENSDART00000110204 ENSDART00000123278	pikfyve Links NCBI UniProt Show fit	phosphoinositide kinase, FYVE finger containing
chr5_+_31779911 Show fit	0.40	ENSDART00000098163	slc25a25b Links NCBI UniProt Show fit	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25b
chr7_-_5375214 Show fit	0.40	ENSDART00000033316	vangl2 Links NCBI UniProt Show fit	VANGL planar cell polarity protein 2
chr12_-_611367 Show fit	0.40	ENSDART00000152286	wu:fj29h11 Links NCBI UniProt Show fit	wu:fj29h11
chr6_+_20647155 Show fit	0.40	ENSDART00000193477	slc19a1 Links NCBI UniProt Show fit	solute carrier family 19 (folate transporter), member 1
chr6_+_18544791 Show fit	0.39	ENSDART00000167463 ENSDART00000169599	atad5b Links NCBI UniProt Show fit	ATPase family, AAA domain containing 5b
chr7_-_16596938 Show fit	0.39	ENSDART00000134548	e2f8 Links NCBI UniProt Show fit	E2F transcription factor 8
chr17_-_2590222 Show fit	0.39	ENSDART00000185711	CR759892.1 Links NCBI UniProt Show fit
chr11_-_22605981 Show fit	0.39	ENSDART00000186923	myog Links NCBI UniProt Show fit	myogenin
chr17_-_15189397 Show fit	0.38	ENSDART00000133710 ENSDART00000110507	wdhd1 Links NCBI UniProt Show fit	WD repeat and HMG-box DNA binding protein 1
chr16_+_35870456 Show fit	0.38	ENSDART00000184321	thrap3a Links NCBI UniProt Show fit	thyroid hormone receptor associated protein 3a
chr16_-_30564319 Show fit	0.38	ENSDART00000145087	lmna Links NCBI UniProt Show fit	lamin A
chr2_+_21048661 Show fit	0.38	ENSDART00000156876	rreb1b Links NCBI UniProt Show fit	ras responsive element binding protein 1b
chr19_-_18130567 Show fit	0.38	ENSDART00000190659 ENSDART00000022803	snx10a Links NCBI UniProt Show fit	sorting nexin 10a
chr18_-_15610856 Show fit	0.37	ENSDART00000099849	arntl2 Links NCBI UniProt Show fit	aryl hydrocarbon receptor nuclear translocator-like 2
chr9_+_22780901 Show fit	0.37	ENSDART00000110992 ENSDART00000143972	rif1 Links NCBI UniProt Show fit	replication timing regulatory factor 1
chr5_-_28767573 Show fit	0.36	ENSDART00000158299 ENSDART00000043466	traf2a Links NCBI UniProt Show fit	Tnf receptor-associated factor 2a
chr9_+_13120419 Show fit	0.36	ENSDART00000141005	fam117bb Links NCBI UniProt Show fit	family with sequence similarity 117, member Bb
chr16_-_26435431 Show fit	0.36	ENSDART00000187526	megf8 Links NCBI UniProt Show fit	multiple EGF-like-domains 8
chr5_+_37729207 Show fit	0.36	ENSDART00000184378	cdc42ep2 Links NCBI UniProt Show fit	CDC42 effector protein (Rho GTPase binding) 2
chr3_-_62527675 Show fit	0.36	ENSDART00000155048 ENSDART00000064500	sox9b Links NCBI UniProt Show fit	SRY (sex determining region Y)-box 9b
chr13_+_1726953 Show fit	0.36	ENSDART00000103004	zmp:0000000760 Links NCBI UniProt Show fit	zmp:0000000760
chr21_+_45267589 Show fit	0.36	ENSDART00000182963 ENSDART00000155681 ENSDART00000192632	tcf7 Links NCBI UniProt Show fit	transcription factor 7
chr23_+_21405201 Show fit	0.36	ENSDART00000144409	iffo2a Links NCBI UniProt Show fit	intermediate filament family orphan 2a
chr1_+_16621345 Show fit	0.36	ENSDART00000149026	pcm1 Links NCBI UniProt Show fit	pericentriolar material 1
chr13_+_46941930 Show fit	0.35	ENSDART00000056962	fbxo5 Links NCBI UniProt Show fit	F-box protein 5
chr22_+_18349794 Show fit	0.35	ENSDART00000186580	gatad2ab Links NCBI UniProt Show fit	GATA zinc finger domain containing 2Ab
chr14_+_49376011 Show fit	0.34	ENSDART00000020961	tnip1 Links NCBI UniProt Show fit	TNFAIP3 interacting protein 1
chr3_+_62339264 Show fit	0.34	ENSDART00000174569	BX470259.3 Links NCBI UniProt Show fit
chr5_-_20205075 Show fit	0.34	ENSDART00000051611	dao.3 Links NCBI UniProt Show fit	D-amino-acid oxidase, tandem duplicate 3
chr13_+_45967179 Show fit	0.33	ENSDART00000074499	olig4 Links NCBI UniProt Show fit	oligodendrocyte transcription factor 4
chr8_-_18880399 Show fit	0.33	ENSDART00000169043	sh3gl1b Links NCBI UniProt Show fit	SH3-domain GRB2-like 1b
chr25_+_18964782 Show fit	0.33	ENSDART00000017299	tdg.1 Links NCBI UniProt Show fit	thymine DNA glycosylase, tandem duplicate 1
chr4_-_77135340 Show fit	0.33	ENSDART00000180581 ENSDART00000179901	CU467646.7 Links NCBI UniProt Show fit
chr25_-_37262220 Show fit	0.32	ENSDART00000153789 ENSDART00000155182	rfwd3 Links NCBI UniProt Show fit	ring finger and WD repeat domain 3
chr19_+_16015881 Show fit	0.32	ENSDART00000187135	ctps1a Links NCBI UniProt Show fit	CTP synthase 1a
chr1_+_21563311 Show fit	0.32	ENSDART00000147076 ENSDART00000006147	primpol Links NCBI UniProt Show fit	primase and polymerase (DNA-directed)
chr8_-_53960349 Show fit	0.32	ENSDART00000160074	cdk11b Links NCBI UniProt Show fit	cyclin-dependent kinase 11B
chr10_-_21545091 Show fit	0.32	ENSDART00000029122 ENSDART00000132207	zgc:165539 Links NCBI UniProt Show fit	zgc:165539
chr7_+_61480296 Show fit	0.31	ENSDART00000083255	adam19a Links NCBI UniProt Show fit	ADAM metallopeptidase domain 19a
chr22_-_7539414 Show fit	0.31	ENSDART00000159083	BX511034.5 Links NCBI UniProt Show fit
chr16_+_28994709 Show fit	0.31	ENSDART00000088023	gon4l Links NCBI UniProt Show fit	gon-4-like (C. elegans)
chr19_+_16016038 Show fit	0.31	ENSDART00000131319	ctps1a Links NCBI UniProt Show fit	CTP synthase 1a
chr3_+_60721342 Show fit	0.31	ENSDART00000157772	foxj1a Links NCBI UniProt Show fit	forkhead box J1a
chr2_+_35880600 Show fit	0.31	ENSDART00000004277	lamc1 Links NCBI UniProt Show fit	laminin, gamma 1
chr10_+_13209580 Show fit	0.31	ENSDART00000000887 ENSDART00000136932	rassf6 Links NCBI UniProt Show fit	Ras association (RalGDS/AF-6) domain family 6
chr4_+_5832311 Show fit	0.31	ENSDART00000121743 ENSDART00000158233 ENSDART00000165187	si:ch73-352p4.5 Links NCBI UniProt Show fit	si:ch73-352p4.5
chr7_-_16598212 Show fit	0.30	ENSDART00000128488	e2f8 Links NCBI UniProt Show fit	E2F transcription factor 8
chr23_+_32101202 Show fit	0.30	ENSDART00000000992	zgc:56699 Links NCBI UniProt Show fit	zgc:56699
chr4_-_45115963 Show fit	0.30	ENSDART00000137248	si:dkey-51d8.6 Links NCBI UniProt Show fit	si:dkey-51d8.6
chr2_-_45510699 Show fit	0.30	ENSDART00000024034 ENSDART00000145634	gpsm2 Links NCBI UniProt Show fit	G protein signaling modulator 2
chr23_+_43424518 Show fit	0.30	ENSDART00000022498	tti1 Links NCBI UniProt Show fit	TELO2 interacting protein 1
chr3_-_61377127 Show fit	0.29	ENSDART00000155932	si:dkey-111k8.2 Links NCBI UniProt Show fit	si:dkey-111k8.2
chr14_+_52413846 Show fit	0.29	ENSDART00000160952	noa1 Links NCBI UniProt Show fit	nitric oxide associated 1
chr2_-_45510223 Show fit	0.29	ENSDART00000113058	gpsm2 Links NCBI UniProt Show fit	G protein signaling modulator 2
chr2_-_34138400 Show fit	0.29	ENSDART00000056667	cenpl Links NCBI UniProt Show fit	centromere protein L
chr21_-_31013817 Show fit	0.29	ENSDART00000065504	ncbp3 Links NCBI UniProt Show fit	nuclear cap binding subunit 3
chr1_+_19930520 Show fit	0.29	ENSDART00000158344	apbb2b Links NCBI UniProt Show fit	amyloid beta (A4) precursor protein-binding, family B, member 2b
chr9_+_12907574 Show fit	0.29	ENSDART00000102348	si:dkey-230p4.1 Links NCBI UniProt Show fit	si:dkey-230p4.1
chr19_-_18152942 Show fit	0.29	ENSDART00000190182	nfe2l3 Links NCBI UniProt Show fit	nuclear factor, erythroid 2-like 3
chr17_-_50045375 Show fit	0.29	ENSDART00000184639	FO834825.2 Links NCBI UniProt Show fit
chr6_-_27891961 Show fit	0.28	ENSDART00000155116	im:7152348 Links NCBI UniProt Show fit	im:7152348
chr17_+_23964132 Show fit	0.28	ENSDART00000154823	xpo1b Links NCBI UniProt Show fit	exportin 1 (CRM1 homolog, yeast) b
chr3_-_30488063 Show fit	0.28	ENSDART00000055393 ENSDART00000151367	med25 Links NCBI UniProt Show fit	mediator complex subunit 25
chr19_+_627899 Show fit	0.28	ENSDART00000148508	tert Links NCBI UniProt Show fit	telomerase reverse transcriptase
chr19_-_7033636 Show fit	0.28	ENSDART00000122815 ENSDART00000123443 ENSDART00000124094	daxx Links NCBI UniProt Show fit	death-domain associated protein
chr7_-_56831621 Show fit	0.28	ENSDART00000182912	senp8 Links NCBI UniProt Show fit	SUMO/sentrin peptidase family member, NEDD8 specific
chr23_-_33709964 Show fit	0.28	ENSDART00000143333 ENSDART00000130338	pou6f1 Links NCBI UniProt Show fit	POU class 6 homeobox 1
chr8_+_3496204 Show fit	0.28	ENSDART00000085993	pxnb Links NCBI UniProt Show fit	paxillin b
chr13_-_7233811 Show fit	0.27	ENSDART00000162026	ninl Links NCBI UniProt Show fit	ninein-like
chr21_-_11970199 Show fit	0.27	ENSDART00000114524	nop56 Links NCBI UniProt Show fit	NOP56 ribonucleoprotein homolog
chr7_+_1579510 Show fit	0.27	ENSDART00000190525	supt16h Links NCBI UniProt Show fit	SPT16 homolog, facilitates chromatin remodeling subunit
chr19_+_48102560 Show fit	0.27	ENSDART00000164464	utp18 Links NCBI UniProt Show fit	UTP18 small subunit (SSU) processome component
chr7_-_26518086 Show fit	0.27	ENSDART00000058913	eif4a1a Links NCBI UniProt Show fit	eukaryotic translation initiation factor 4A1A
chr25_+_126174 Show fit	0.27	ENSDART00000168913	cntn1a Links NCBI UniProt Show fit	contactin 1a
chr17_-_43665366 Show fit	0.27	ENSDART00000127945	egr2a Links NCBI UniProt Show fit	early growth response 2a
chr19_+_43256986 Show fit	0.27	ENSDART00000182336	DGKD Links NCBI UniProt Show fit	diacylglycerol kinase delta
chr2_+_20868286 Show fit	0.27	ENSDART00000062591	odr4 Links NCBI UniProt Show fit	odr-4 GPCR localization factor homolog
chr8_-_27849770 Show fit	0.27	ENSDART00000190196 ENSDART00000181244	cttnbp2nlb Links NCBI UniProt Show fit	CTTNBP2 N-terminal like b
chr16_-_31790285 Show fit	0.26	ENSDART00000184655	chd4b Links NCBI UniProt Show fit	chromodomain helicase DNA binding protein 4b
chr23_-_43424510 Show fit	0.26	ENSDART00000055564	rprd1b Links NCBI UniProt Show fit	regulation of nuclear pre-mRNA domain containing 1B
chr9_-_1951144 Show fit	0.26	ENSDART00000082355	hoxd4a Links NCBI UniProt Show fit	homeobox D4a
chr9_+_27329640 Show fit	0.26	ENSDART00000111039	GTPBP8 Links NCBI UniProt Show fit	si:rp71-84d19.3
chr6_-_19926657 Show fit	0.26	ENSDART00000157527 ENSDART00000171384	ntn1a Links NCBI UniProt Show fit	netrin 1a
chr14_-_46259523 Show fit	0.26	ENSDART00000172890	si:ch211-113d11.8 Links NCBI UniProt Show fit	si:ch211-113d11.8
chr19_-_10971230 Show fit	0.26	ENSDART00000166196	LO018584.1 Links NCBI UniProt Show fit
chr17_-_11357851 Show fit	0.26	ENSDART00000153915	si:ch211-185a18.2 Links NCBI UniProt Show fit	si:ch211-185a18.2
chr6_+_3717613 Show fit	0.26	ENSDART00000184330	ssb Links NCBI UniProt Show fit	Sjogren syndrome antigen B (autoantigen La)
chr2_+_43920461 Show fit	0.26	ENSDART00000123673	si:ch211-195h23.3 Links NCBI UniProt Show fit	si:ch211-195h23.3
chr3_-_58165254 Show fit	0.26	ENSDART00000093031	snu13a Links NCBI UniProt Show fit	SNU13 homolog, small nuclear ribonucleoprotein a (U4/U6.U5)
chr11_+_24046179 Show fit	0.26	ENSDART00000006703	maf1 Links NCBI UniProt Show fit	MAF1 homolog, negative regulator of RNA polymerase III
chr4_-_39171837 Show fit	0.25	ENSDART00000179734	si:ch211-22k7.9 Links NCBI UniProt Show fit	si:ch211-22k7.9
chr15_-_23442891 Show fit	0.25	ENSDART00000059376	ube4a Links NCBI UniProt Show fit	ubiquitination factor E4A (UFD2 homolog, yeast)
chr22_+_38978084 Show fit	0.25	ENSDART00000025482	arhgef3 Links NCBI UniProt Show fit	Rho guanine nucleotide exchange factor (GEF) 3
chr3_+_18846488 Show fit	0.25	ENSDART00000148133	tmem104 Links NCBI UniProt Show fit	transmembrane protein 104
chr4_-_39111612 Show fit	0.25	ENSDART00000150394	si:dkey-122c11.8 Links NCBI UniProt Show fit	si:dkey-122c11.8
chr15_+_32798333 Show fit	0.25	ENSDART00000162370 ENSDART00000166525	spartb Links NCBI UniProt Show fit	spartin b
chr25_+_22017182 Show fit	0.25	ENSDART00000156517	si:dkey-217l24.1 Links NCBI UniProt Show fit	si:dkey-217l24.1
chr16_+_53203370 Show fit	0.25	ENSDART00000154669	si:ch211-269k10.2 Links NCBI UniProt Show fit	si:ch211-269k10.2
chr14_-_38843690 Show fit	0.25	ENSDART00000183629	spdl1 Links NCBI UniProt Show fit	spindle apparatus coiled-coil protein 1
chr3_-_16411244 Show fit	0.25	ENSDART00000140067	eftud2 Links NCBI UniProt Show fit	elongation factor Tu GTP binding domain containing 2
chr24_+_37799818 Show fit	0.24	ENSDART00000131975	telo2 Links NCBI UniProt Show fit	TEL2, telomere maintenance 2, homolog (S. cerevisiae)
chr23_-_23401305 Show fit	0.24	ENSDART00000078936	her9 Links NCBI UniProt Show fit	hairy-related 9
chr5_+_56268436 Show fit	0.24	ENSDART00000021159	lhx1b Links NCBI UniProt Show fit	LIM homeobox 1b
chr8_-_10961991 Show fit	0.24	ENSDART00000139603	trim33 Links NCBI UniProt Show fit	tripartite motif containing 33
chr25_+_31122806 Show fit	0.24	ENSDART00000067039	rassf8a Links NCBI UniProt Show fit	Ras association (RalGDS/AF-6) domain family (N-terminal) member 8a
chr4_-_33331681 Show fit	0.24	ENSDART00000150319	znf1000 Links NCBI UniProt Show fit	zinc finger protein 1000
chr2_+_33326522 Show fit	0.24	ENSDART00000056655	klf17 Links NCBI UniProt Show fit	Kruppel-like factor 17
chr4_+_2655358 Show fit	0.24	ENSDART00000007638	bcap29 Links NCBI UniProt Show fit	B cell receptor associated protein 29
chr5_+_53691803 Show fit	0.24	ENSDART00000163256	taf6 Links NCBI UniProt Show fit	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor
chr12_-_4532066 Show fit	0.24	ENSDART00000092687	trpm4b.2 Links NCBI UniProt Show fit	transient receptor potential cation channel, subfamily M, member 4b, transient receptor potential cation channel, subfamily M, member 4b, tandem duplicate 2
chr5_+_31791001 Show fit	0.24	ENSDART00000043010	slc25a25b Links NCBI UniProt Show fit	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25b
chr9_+_17423941 Show fit	0.23	ENSDART00000112884 ENSDART00000155233	kbtbd7 Links NCBI UniProt Show fit	kelch repeat and BTB (POZ) domain containing 7
chr2_-_24962820 Show fit	0.23	ENSDART00000182767	hltf Links NCBI UniProt Show fit	helicase-like transcription factor
chr12_+_695619 Show fit	0.23	ENSDART00000161691	abcc3 Links NCBI UniProt Show fit	ATP-binding cassette, sub-family C (CFTR/MRP), member 3
chr4_+_22297839 Show fit	0.23	ENSDART00000077707	llph Links NCBI UniProt Show fit	LLP homolog, long-term synaptic facilitation (Aplysia)
chr21_+_17956856 Show fit	0.23	ENSDART00000080431	dnai1.2 Links NCBI UniProt Show fit	dynein, axonemal, intermediate chain 1, paralog 2
chr15_+_2857556 Show fit	0.23	ENSDART00000157758	mre11a Links NCBI UniProt Show fit	MRE11 homolog A, double strand break repair nuclease
chr6_-_33916756 Show fit	0.23	ENSDART00000137447 ENSDART00000138488	nasp Links NCBI UniProt Show fit	nuclear autoantigenic sperm protein (histone-binding)
chr12_-_30338779 Show fit	0.23	ENSDART00000192511	vwa2 Links NCBI UniProt Show fit	von Willebrand factor A domain containing 2
chr4_-_77135076 Show fit	0.23	ENSDART00000174184	zgc:173770 Links NCBI UniProt Show fit	zgc:173770
chr19_-_46018152 Show fit	0.23	ENSDART00000159206	krit1 Links NCBI UniProt Show fit	KRIT1, ankyrin repeat containing
chr5_-_2672492 Show fit	0.23	ENSDART00000192337	CABZ01072548.1 Links NCBI UniProt Show fit
chr21_+_20391978 Show fit	0.23	ENSDART00000180817	si:dkey-30k6.5 Links NCBI UniProt Show fit	si:dkey-30k6.5
chr21_-_39058490 Show fit	0.23	ENSDART00000114885	aldh3a2b Links NCBI UniProt Show fit	aldehyde dehydrogenase 3 family, member A2b
chr24_-_25461267 Show fit	0.23	ENSDART00000105820	mbtps2 Links NCBI UniProt Show fit	membrane-bound transcription factor peptidase, site 2
chr19_-_47997424 Show fit	0.23	ENSDART00000081675	ctnnb2 Links NCBI UniProt Show fit	catenin, beta 2
chr18_-_12327426 Show fit	0.22	ENSDART00000136992 ENSDART00000114024	fam107b Links NCBI UniProt Show fit	family with sequence similarity 107, member B
chr20_-_13623882 Show fit	0.22	ENSDART00000125218 ENSDART00000152499	sytl3 Links NCBI UniProt Show fit	synaptotagmin-like 3
chr6_+_35052721 Show fit	0.22	ENSDART00000191090 ENSDART00000082940	uhmk1 Links NCBI UniProt Show fit	U2AF homology motif (UHM) kinase 1
chr2_-_56387041 Show fit	0.22	ENSDART00000036240	cers4b Links NCBI UniProt Show fit	ceramide synthase 4b
chr5_-_39171302 Show fit	0.22	ENSDART00000020808	paqr3a Links NCBI UniProt Show fit	progestin and adipoQ receptor family member IIIa
chr7_+_67749251 Show fit	0.22	ENSDART00000167562	dhx38 Links NCBI UniProt Show fit	DEAH (Asp-Glu-Ala-His) box polypeptide 38
chr8_-_37101581 Show fit	0.22	ENSDART00000185922	zgc:162200 Links NCBI UniProt Show fit	zgc:162200
chr9_+_20853894 Show fit	0.22	ENSDART00000003648	wdr3 Links NCBI UniProt Show fit	WD repeat domain 3
chr23_+_16807209 Show fit	0.22	ENSDART00000141966	zgc:114081 Links NCBI UniProt Show fit	zgc:114081
chr8_-_21988833 Show fit	0.22	ENSDART00000167708	nphp4 Links NCBI UniProt Show fit	nephronophthisis 4
chr9_-_14143370 Show fit	0.22	ENSDART00000108950	ttll4 Links NCBI UniProt Show fit	tubulin tyrosine ligase-like family, member 4
chr25_+_16356083 Show fit	0.22	ENSDART00000125925 ENSDART00000125444	tead1a Links NCBI UniProt Show fit	TEA domain family member 1a
chr11_-_34151487 Show fit	0.22	ENSDART00000173039	atp13a3 Links NCBI UniProt Show fit	ATPase 13A3
chr1_+_23784905 Show fit	0.22	ENSDART00000171951 ENSDART00000188521 ENSDART00000183029 ENSDART00000187183	slit2 Links NCBI UniProt Show fit	slit homolog 2 (Drosophila)
chr10_+_16092671 Show fit	0.22	ENSDART00000182761 ENSDART00000154835	megf10 Links NCBI UniProt Show fit	multiple EGF-like-domains 10
chr23_-_478201 Show fit	0.22	ENSDART00000140749	si:ch73-181d5.4 Links NCBI UniProt Show fit	si:ch73-181d5.4
chr23_-_21471022 Show fit	0.22	ENSDART00000104206	her4.2 Links NCBI UniProt Show fit	hairy-related 4, tandem duplicate 2

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	1.1	GO:0033301	cell cycle comprising mitosis without cytokinesis(GO:0033301)
0.3	1.3	GO:0000012	single strand break repair(GO:0000012)
0.2	1.0	GO:0002568	somatic diversification of T cell receptor genes(GO:0002568) somatic recombination of T cell receptor gene segments(GO:0002681) T cell receptor V(D)J recombination(GO:0033153)
0.2	0.6	GO:0044210	'de novo' CTP biosynthetic process(GO:0044210)
0.1	0.4	GO:0005981	regulation of glycogen catabolic process(GO:0005981)
0.1	0.4	GO:0015893	folic acid transport(GO:0015884) drug transport(GO:0015893) methotrexate transport(GO:0051958) reduced folate transmembrane transport(GO:0098838)
0.1	0.6	GO:0034454	microtubule anchoring at centrosome(GO:0034454)
0.1	0.8	GO:0003319	cardioblast migration to the midline involved in heart rudiment formation(GO:0003319)
0.1	0.3	GO:0043504	mitochondrial DNA repair(GO:0043504)
0.1	0.3	GO:0007571	age-dependent general metabolic decline(GO:0007571)
0.1	0.4	GO:0061032	visceral serous pericardium development(GO:0061032)
0.1	0.4	GO:0051352	negative regulation of ligase activity(GO:0051352) negative regulation of ubiquitin-protein transferase activity(GO:0051444) negative regulation of ubiquitin protein ligase activity(GO:1904667)
0.1	1.2	GO:1903963	icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) arachidonate transport(GO:1903963)
0.1	0.3	GO:0021960	anterior commissure morphogenesis(GO:0021960)
0.1	1.5	GO:0071425	hematopoietic stem cell proliferation(GO:0071425)
0.1	0.3	GO:0009078	alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) D-alanine family amino acid metabolic process(GO:0046144) D-alanine metabolic process(GO:0046436) D-alanine catabolic process(GO:0055130)
0.1	0.4	GO:0008591	regulation of Wnt signaling pathway, calcium modulating pathway(GO:0008591)
0.1	0.2	GO:0048785	hatching gland development(GO:0048785)
0.1	0.2	GO:0002369	T cell cytokine production(GO:0002369)
0.1	0.4	GO:0048743	positive regulation of skeletal muscle fiber development(GO:0048743)
0.1	0.2	GO:0030857	negative regulation of epithelial cell differentiation(GO:0030857)
0.1	0.4	GO:0070986	left/right axis specification(GO:0070986)
0.1	0.2	GO:0007414	axonal defasciculation(GO:0007414)
0.1	0.2	GO:0019264	glycine biosynthetic process from serine(GO:0019264)
0.1	1.5	GO:0080111	DNA demethylation(GO:0080111)
0.1	0.4	GO:0031116	positive regulation of microtubule polymerization(GO:0031116)
0.1	0.2	GO:0071634	transforming growth factor beta activation(GO:0036363) regulation of transforming growth factor beta production(GO:0071634) negative regulation of transforming growth factor beta production(GO:0071635)
0.1	0.2	GO:0060912	cardiac cell fate specification(GO:0060912)
0.1	0.2	GO:0071918	urea transmembrane transport(GO:0071918)
0.1	1.0	GO:0034724	DNA replication-independent nucleosome organization(GO:0034724)
0.1	0.2	GO:0009191	ribonucleoside diphosphate catabolic process(GO:0009191)
0.1	0.4	GO:0090342	regulation of cell aging(GO:0090342)
0.1	0.3	GO:0060295	regulation of cilium movement involved in cell motility(GO:0060295) regulation of cilium beat frequency involved in ciliary motility(GO:0060296) regulation of cilium-dependent cell motility(GO:1902019)
0.1	0.3	GO:0006370	7-methylguanosine mRNA capping(GO:0006370)
0.1	0.2	GO:2000660	regulation of interleukin-1-mediated signaling pathway(GO:2000659) negative regulation of interleukin-1-mediated signaling pathway(GO:2000660)
0.1	0.2	GO:1903723	negative regulation of centriole elongation(GO:1903723)
0.1	0.2	GO:0034219	carbohydrate transmembrane transport(GO:0034219)
0.1	0.3	GO:2000096	positive regulation of Wnt signaling pathway, planar cell polarity pathway(GO:2000096)
0.0	0.4	GO:0048569	post-embryonic organ development(GO:0048569)
0.0	1.0	GO:0015671	oxygen transport(GO:0015671)
0.0	0.2	GO:0070973	protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0	0.2	GO:0030951	establishment or maintenance of microtubule cytoskeleton polarity(GO:0030951)
0.0	0.1	GO:0060571	invagination involved in gastrulation with mouth forming second(GO:0055109) morphogenesis of an epithelial fold(GO:0060571)
0.0	0.2	GO:0046900	tetrahydrofolylpolyglutamate metabolic process(GO:0046900)
0.0	0.2	GO:0031293	membrane protein intracellular domain proteolysis(GO:0031293)
0.0	0.2	GO:0072393	microtubule anchoring at microtubule organizing center(GO:0072393)
0.0	0.2	GO:0071733	transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.0	0.3	GO:0021778	oligodendrocyte cell fate specification(GO:0021778) glial cell fate specification(GO:0021780)
0.0	0.7	GO:0007339	binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344)
0.0	0.1	GO:0042730	fibrinolysis(GO:0042730)
0.0	0.6	GO:0032525	somite rostral/caudal axis specification(GO:0032525)
0.0	0.1	GO:0021698	cerebellar Purkinje cell layer structural organization(GO:0021693) cerebellar cortex structural organization(GO:0021698) CUT catabolic process(GO:0071034) CUT metabolic process(GO:0071043)
0.0	0.2	GO:0021730	trigeminal sensory nucleus development(GO:0021730)
0.0	1.0	GO:0060972	left/right pattern formation(GO:0060972)
0.0	0.8	GO:0071577	zinc II ion transmembrane transport(GO:0071577)
0.0	0.5	GO:0021754	facial nucleus development(GO:0021754)
0.0	0.5	GO:0015937	coenzyme A biosynthetic process(GO:0015937)
0.0	0.6	GO:0021988	olfactory bulb development(GO:0021772) olfactory lobe development(GO:0021988)
0.0	0.2	GO:0046822	regulation of nucleocytoplasmic transport(GO:0046822)
0.0	0.4	GO:0007026	negative regulation of microtubule depolymerization(GO:0007026) negative regulation of microtubule polymerization or depolymerization(GO:0031111)
0.0	0.3	GO:0043696	dedifferentiation(GO:0043696) cell dedifferentiation(GO:0043697)
0.0	0.4	GO:0031268	pseudopodium organization(GO:0031268) pseudopodium assembly(GO:0031269) regulation of pseudopodium assembly(GO:0031272) positive regulation of pseudopodium assembly(GO:0031274)
0.0	0.1	GO:0043703	retinal cone cell fate determination(GO:0042671) eye photoreceptor cell fate commitment(GO:0042706) photoreceptor cell fate determination(GO:0043703) retinal cone cell fate commitment(GO:0046551) photoreceptor cell fate commitment(GO:0046552) camera-type eye photoreceptor cell fate commitment(GO:0060220)
0.0	0.2	GO:0060052	neurofilament cytoskeleton organization(GO:0060052)
0.0	0.7	GO:0007004	RNA-dependent DNA biosynthetic process(GO:0006278) telomere maintenance via telomerase(GO:0007004)
0.0	0.3	GO:0000056	ribosomal small subunit export from nucleus(GO:0000056)
0.0	0.3	GO:0071479	cellular response to ionizing radiation(GO:0071479)
0.0	0.2	GO:0034334	adherens junction maintenance(GO:0034334)
0.0	0.2	GO:0006621	protein retention in ER lumen(GO:0006621)
0.0	0.2	GO:0042138	meiotic DNA double-strand break formation(GO:0042138)
0.0	0.1	GO:1990108	protein linear deubiquitination(GO:1990108)
0.0	0.5	GO:0018095	protein polyglutamylation(GO:0018095)
0.0	0.2	GO:0007080	mitotic metaphase plate congression(GO:0007080)
0.0	0.3	GO:0006285	base-excision repair, AP site formation(GO:0006285)
0.0	0.1	GO:1901098	positive regulation of autophagosome maturation(GO:1901098)
0.0	0.1	GO:0060760	positive regulation of cytokine-mediated signaling pathway(GO:0001961) positive regulation of response to cytokine stimulus(GO:0060760)
0.0	0.2	GO:0051045	negative regulation of membrane protein ectodomain proteolysis(GO:0051045)
0.0	0.3	GO:0050908	detection of light stimulus involved in visual perception(GO:0050908) detection of light stimulus involved in sensory perception(GO:0050962)
0.0	0.2	GO:0090178	establishment of planar polarity of embryonic epithelium(GO:0042249) establishment of planar polarity involved in neural tube closure(GO:0090177) regulation of establishment of planar polarity involved in neural tube closure(GO:0090178) planar cell polarity pathway involved in neural tube closure(GO:0090179)
0.0	0.1	GO:0019427	acetate metabolic process(GO:0006083) acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.0	0.1	GO:1901909	diphosphoinositol polyphosphate metabolic process(GO:0071543) diadenosine pentaphosphate metabolic process(GO:1901906) diadenosine pentaphosphate catabolic process(GO:1901907) diadenosine hexaphosphate metabolic process(GO:1901908) diadenosine hexaphosphate catabolic process(GO:1901909) adenosine 5'-(hexahydrogen pentaphosphate) metabolic process(GO:1901910) adenosine 5'-(hexahydrogen pentaphosphate) catabolic process(GO:1901911)
0.0	0.3	GO:0032088	negative regulation of NF-kappaB transcription factor activity(GO:0032088)
0.0	0.2	GO:2000251	positive regulation of actin cytoskeleton reorganization(GO:2000251)
0.0	0.2	GO:0021588	cerebellum formation(GO:0021588)
0.0	0.1	GO:0010606	positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.0	0.1	GO:0036498	IRE1-mediated unfolded protein response(GO:0036498)
0.0	0.4	GO:0033209	tumor necrosis factor-mediated signaling pathway(GO:0033209)
0.0	1.1	GO:0030490	maturation of SSU-rRNA(GO:0030490)
0.0	0.1	GO:0015910	peroxisomal long-chain fatty acid import(GO:0015910)
0.0	0.2	GO:0021694	cerebellar Purkinje cell layer formation(GO:0021694) cerebellar Purkinje cell differentiation(GO:0021702)
0.0	0.6	GO:0002377	immunoglobulin production(GO:0002377)
0.0	0.1	GO:0006013	mannose metabolic process(GO:0006013)
0.0	0.1	GO:0097039	protein linear polyubiquitination(GO:0097039)
0.0	0.1	GO:0035627	ceramide transport(GO:0035627)
0.0	0.1	GO:0001709	cell fate determination(GO:0001709)
0.0	0.2	GO:0032228	regulation of synaptic transmission, GABAergic(GO:0032228)
0.0	0.6	GO:0071230	cellular response to amino acid stimulus(GO:0071230)
0.0	0.1	GO:0032289	central nervous system myelin formation(GO:0032289)
0.0	0.1	GO:0021627	olfactory nerve development(GO:0021553) olfactory nerve morphogenesis(GO:0021627) olfactory nerve formation(GO:0021628)
0.0	0.6	GO:0060319	primitive erythrocyte differentiation(GO:0060319)
0.0	0.5	GO:0035338	long-chain fatty-acyl-CoA biosynthetic process(GO:0035338)
0.0	0.1	GO:0090161	Golgi ribbon formation(GO:0090161)
0.0	0.2	GO:0071451	response to superoxide(GO:0000303) response to oxygen radical(GO:0000305) removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451) cellular oxidant detoxification(GO:0098869) cellular detoxification(GO:1990748)
0.0	0.1	GO:0090646	mitochondrial tRNA processing(GO:0090646)
0.0	0.1	GO:1904158	axonemal central apparatus assembly(GO:1904158)
0.0	0.1	GO:0060142	regulation of syncytium formation by plasma membrane fusion(GO:0060142)
0.0	0.2	GO:1901998	toxin transport(GO:1901998)
0.0	0.1	GO:0080120	CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.0	0.1	GO:0034058	endosomal vesicle fusion(GO:0034058)
0.0	0.1	GO:0034729	histone H3-K79 methylation(GO:0034729) regulation of transcription regulatory region DNA binding(GO:2000677)
0.0	0.1	GO:0001672	regulation of chromatin assembly or disassembly(GO:0001672)
0.0	0.1	GO:0060049	regulation of protein glycosylation(GO:0060049)
0.0	0.2	GO:0043490	acidic amino acid transport(GO:0015800) aspartate transport(GO:0015810) L-glutamate transport(GO:0015813) malate-aspartate shuttle(GO:0043490)
0.0	0.3	GO:0000186	activation of MAPKK activity(GO:0000186)
0.0	0.0	GO:0033147	negative regulation of intracellular estrogen receptor signaling pathway(GO:0033147)
0.0	0.3	GO:0060999	positive regulation of dendritic spine development(GO:0060999)
0.0	0.2	GO:0061055	myotome development(GO:0061055)
0.0	0.2	GO:0036158	outer dynein arm assembly(GO:0036158)
0.0	0.2	GO:0030206	chondroitin sulfate biosynthetic process(GO:0030206)
0.0	0.1	GO:0000244	spliceosomal tri-snRNP complex assembly(GO:0000244)
0.0	0.0	GO:0015760	hexose phosphate transport(GO:0015712) glucose-6-phosphate transport(GO:0015760)
0.0	0.1	GO:0003365	establishment of cell polarity involved in ameboidal cell migration(GO:0003365)
0.0	0.1	GO:0051876	pigment granule dispersal(GO:0051876)
0.0	0.1	GO:0071205	protein localization to juxtaparanode region of axon(GO:0071205) protein localization to axon(GO:0099612)
0.0	0.2	GO:0072698	protein localization to microtubule cytoskeleton(GO:0072698)
0.0	0.3	GO:0060287	epithelial cilium movement involved in determination of left/right asymmetry(GO:0060287)
0.0	0.1	GO:0036388	pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.0	0.3	GO:0060021	palate development(GO:0060021)
0.0	0.1	GO:0030242	pexophagy(GO:0030242)
0.0	0.2	GO:0006048	UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.0	0.1	GO:0072498	embryonic skeletal joint development(GO:0072498)
0.0	0.4	GO:0007157	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0007157)
0.0	0.1	GO:0051454	pH elevation(GO:0045852) intracellular pH elevation(GO:0051454)
0.0	0.2	GO:0048026	positive regulation of mRNA splicing, via spliceosome(GO:0048026)
0.0	0.3	GO:0006270	DNA replication initiation(GO:0006270)
0.0	0.2	GO:1902287	semaphorin-plexin signaling pathway involved in neuron projection guidance(GO:1902285) semaphorin-plexin signaling pathway involved in axon guidance(GO:1902287)
0.0	0.2	GO:0048263	determination of dorsal identity(GO:0048263)
0.0	0.4	GO:0000723	telomere maintenance(GO:0000723) telomere organization(GO:0032200)
0.0	0.7	GO:0007098	centrosome cycle(GO:0007098)
0.0	0.2	GO:0045743	positive regulation of fibroblast growth factor receptor signaling pathway(GO:0045743)
0.0	0.3	GO:0036297	interstrand cross-link repair(GO:0036297)
0.0	0.2	GO:0033173	calcineurin-NFAT signaling cascade(GO:0033173)
0.0	0.0	GO:0031630	regulation of synaptic vesicle fusion to presynaptic membrane(GO:0031630)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.7	GO:0070209	ASTRA complex(GO:0070209)
0.2	0.6	GO:0097268	cytoophidium(GO:0097268)
0.2	0.6	GO:0005880	nuclear microtubule(GO:0005880)
0.1	0.3	GO:0000333	telomerase catalytic core complex(GO:0000333)
0.1	0.6	GO:0031931	TORC1 complex(GO:0031931)
0.1	0.5	GO:0031428	box C/D snoRNP complex(GO:0031428)
0.1	1.0	GO:0031838	haptoglobin-hemoglobin complex(GO:0031838)
0.1	0.5	GO:0034388	Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.1	0.7	GO:0035101	FACT complex(GO:0035101)
0.1	0.2	GO:0046695	SLIK (SAGA-like) complex(GO:0046695)
0.1	0.2	GO:0032838	cell projection cytoplasm(GO:0032838)
0.1	0.6	GO:0031010	ISWI-type complex(GO:0031010)
0.1	0.2	GO:0033186	CAF-1 complex(GO:0033186)
0.0	0.4	GO:0036449	microtubule minus-end(GO:0036449)
0.0	0.1	GO:0032044	DSIF complex(GO:0032044)
0.0	0.6	GO:0034751	aryl hydrocarbon receptor complex(GO:0034751)
0.0	0.2	GO:0030870	Mre11 complex(GO:0030870)
0.0	0.1	GO:1990604	IRE1-TRAF2-ASK1 complex(GO:1990604)
0.0	0.7	GO:1990907	beta-catenin-TCF complex(GO:1990907)
0.0	0.4	GO:0005664	origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0	0.1	GO:1990316	ATG1/ULK1 kinase complex(GO:1990316)
0.0	0.4	GO:0034451	centriolar satellite(GO:0034451)
0.0	0.2	GO:0033553	rDNA heterochromatin(GO:0033553)
0.0	0.1	GO:0005828	kinetochore microtubule(GO:0005828)
0.0	0.1	GO:0031251	PAN complex(GO:0031251)
0.0	0.3	GO:0071007	U2-type catalytic step 2 spliceosome(GO:0071007)
0.0	0.1	GO:0031501	mannosyltransferase complex(GO:0031501)
0.0	0.2	GO:0071797	LUBAC complex(GO:0071797)
0.0	0.8	GO:0000781	chromosome, telomeric region(GO:0000781)
0.0	0.2	GO:0005663	DNA replication factor C complex(GO:0005663)
0.0	0.2	GO:0032797	SMN complex(GO:0032797)
0.0	0.1	GO:0030914	STAGA complex(GO:0030914)
0.0	0.1	GO:0030897	HOPS complex(GO:0030897)
0.0	1.1	GO:0016592	mediator complex(GO:0016592)
0.0	0.2	GO:0019908	cyclin/CDK positive transcription elongation factor complex(GO:0008024) nuclear cyclin-dependent protein kinase holoenzyme complex(GO:0019908)
0.0	0.2	GO:0045095	keratin filament(GO:0045095)
0.0	0.3	GO:0090545	NuRD complex(GO:0016581) CHD-type complex(GO:0090545)
0.0	0.2	GO:0000940	condensed chromosome outer kinetochore(GO:0000940)
0.0	0.7	GO:0005657	replication fork(GO:0005657)
0.0	0.2	GO:0033588	Elongator holoenzyme complex(GO:0033588)
0.0	0.0	GO:0034685	integrin alphav-beta6 complex(GO:0034685)
0.0	0.1	GO:0042575	DNA polymerase complex(GO:0042575)
0.0	0.1	GO:0072357	PTW/PP1 phosphatase complex(GO:0072357)
0.0	0.2	GO:0036157	outer dynein arm(GO:0036157)
0.0	0.1	GO:0005671	Ada2/Gcn5/Ada3 transcription activator complex(GO:0005671)
0.0	0.3	GO:0000164	protein phosphatase type 1 complex(GO:0000164)
0.0	0.1	GO:0034272	phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272)
0.0	1.5	GO:0090575	RNA polymerase II transcription factor complex(GO:0090575)
0.0	0.2	GO:0019773	proteasome core complex, alpha-subunit complex(GO:0019773)
0.0	0.1	GO:0071005	U2-type precatalytic spliceosome(GO:0071005)
0.0	0.3	GO:0035861	site of double-strand break(GO:0035861)
0.0	0.2	GO:0045180	basal cortex(GO:0045180)
0.0	1.6	GO:0016607	nuclear speck(GO:0016607)
0.0	0.3	GO:0097546	ciliary base(GO:0097546)
0.0	0.5	GO:0016514	SWI/SNF complex(GO:0016514)
0.0	0.9	GO:0005814	centriole(GO:0005814)
0.0	0.2	GO:0002116	semaphorin receptor complex(GO:0002116)
0.0	0.4	GO:0000307	cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0	0.1	GO:0000176	nuclear exosome (RNase complex)(GO:0000176) cytoplasmic exosome (RNase complex)(GO:0000177)
0.0	1.2	GO:0000775	chromosome, centromeric region(GO:0000775)
0.0	0.1	GO:1990513	CLOCK-BMAL transcription complex(GO:1990513)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	1.4	GO:0008309	double-stranded DNA exodeoxyribonuclease activity(GO:0008309) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.2	0.6	GO:0003883	CTP synthase activity(GO:0003883)
0.1	1.1	GO:0001217	bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding(GO:0001217)
0.1	0.4	GO:0008386	cholesterol monooxygenase (side-chain-cleaving) activity(GO:0008386) oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen(GO:0016713)
0.1	0.4	GO:0015350	reduced folate carrier activity(GO:0008518) methotrexate transporter activity(GO:0015350)
0.1	0.8	GO:0004962	endothelin receptor activity(GO:0004962)
0.1	0.3	GO:0003721	telomerase RNA reverse transcriptase activity(GO:0003721)
0.1	0.3	GO:0071532	ankyrin repeat binding(GO:0071532)
0.1	0.5	GO:0004594	pantothenate kinase activity(GO:0004594)
0.1	1.0	GO:0031720	haptoglobin binding(GO:0031720)
0.1	0.3	GO:0003884	D-amino-acid oxidase activity(GO:0003884)
0.1	0.2	GO:0030623	U5 snRNA binding(GO:0030623)
0.1	0.2	GO:0070905	glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1	0.7	GO:0035804	structural constituent of egg coat(GO:0035804)
0.1	0.4	GO:0034450	ubiquitin-ubiquitin ligase activity(GO:0034450)
0.1	0.2	GO:0016920	pyroglutamyl-peptidase activity(GO:0016920)
0.0	1.2	GO:0004623	phospholipase A2 activity(GO:0004623)
0.0	0.1	GO:0005547	phosphatidylinositol-3,4,5-trisphosphate binding(GO:0005547)
0.0	0.2	GO:0034481	chondroitin sulfotransferase activity(GO:0034481)
0.0	0.5	GO:0047676	arachidonate-CoA ligase activity(GO:0047676)
0.0	0.2	GO:0000014	single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.0	0.3	GO:0043515	kinetochore binding(GO:0043515)
0.0	0.1	GO:0070051	fibrinogen binding(GO:0070051)
0.0	0.3	GO:0043035	chromatin insulator sequence binding(GO:0043035)
0.0	0.5	GO:0070739	protein-glutamic acid ligase activity(GO:0070739) tubulin-glutamic acid ligase activity(GO:0070740)
0.0	0.3	GO:0008263	mismatch base pair DNA N-glycosylase activity(GO:0000700) pyrimidine-specific mismatch base pair DNA N-glycosylase activity(GO:0008263)
0.0	0.1	GO:0043812	phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.0	1.2	GO:0008574	ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0	1.3	GO:0003684	damaged DNA binding(GO:0003684)
0.0	0.4	GO:0030507	spectrin binding(GO:0030507)
0.0	0.2	GO:0016519	gastric inhibitory peptide receptor activity(GO:0016519)
0.0	0.2	GO:0032422	purine-rich negative regulatory element binding(GO:0032422)
0.0	0.1	GO:0050218	propionate-CoA ligase activity(GO:0050218)
0.0	0.2	GO:0055056	D-glucose transmembrane transporter activity(GO:0055056)
0.0	0.8	GO:0005385	zinc ion transmembrane transporter activity(GO:0005385)
0.0	0.1	GO:0035620	ceramide transporter activity(GO:0035620) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.0	0.2	GO:0019136	deoxynucleoside kinase activity(GO:0019136)
0.0	0.3	GO:0005049	nuclear export signal receptor activity(GO:0005049)
0.0	0.4	GO:0000340	RNA 7-methylguanosine cap binding(GO:0000340)
0.0	0.2	GO:0001098	basal transcription machinery binding(GO:0001098) basal RNA polymerase II transcription machinery binding(GO:0001099)
0.0	0.2	GO:0034452	dynactin binding(GO:0034452)
0.0	0.3	GO:0016868	intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0	0.2	GO:0045294	alpha-catenin binding(GO:0045294)
0.0	0.5	GO:0030515	snoRNA binding(GO:0030515)
0.0	0.3	GO:0004046	aminoacylase activity(GO:0004046)
0.0	0.7	GO:0070063	RNA polymerase binding(GO:0070063)
0.0	0.1	GO:0008486	endopolyphosphatase activity(GO:0000298) diphosphoinositol-polyphosphate diphosphatase activity(GO:0008486) bis(5'-adenosyl)-hexaphosphatase activity(GO:0034431) bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.0	0.6	GO:0004693	cyclin-dependent protein serine/threonine kinase activity(GO:0004693) cyclin-dependent protein kinase activity(GO:0097472)
0.0	0.1	GO:0052905	tRNA (guanine(9)-N(1))-methyltransferase activity(GO:0052905)
0.0	0.2	GO:0004028	3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.0	0.3	GO:0050291	sphingosine N-acyltransferase activity(GO:0050291)
0.0	0.4	GO:0003887	DNA-directed DNA polymerase activity(GO:0003887)
0.0	0.1	GO:0008517	folic acid transporter activity(GO:0008517)
0.0	0.1	GO:0004430	1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0	0.2	GO:0015204	urea transmembrane transporter activity(GO:0015204)
0.0	0.3	GO:0051879	Hsp90 protein binding(GO:0051879)
0.0	0.1	GO:0070579	methylcytosine dioxygenase activity(GO:0070579)
0.0	0.9	GO:0008013	beta-catenin binding(GO:0008013)
0.0	0.1	GO:0031151	histone methyltransferase activity (H3-K79 specific)(GO:0031151)
0.0	0.3	GO:2001069	glycogen binding(GO:2001069)
0.0	0.2	GO:0005025	transforming growth factor beta receptor activity, type I(GO:0005025)
0.0	0.1	GO:0033857	inositol heptakisphosphate kinase activity(GO:0000829) diphosphoinositol-pentakisphosphate kinase activity(GO:0033857)
0.0	0.1	GO:0004128	cytochrome-b5 reductase activity, acting on NAD(P)H(GO:0004128)
0.0	0.4	GO:0005112	Notch binding(GO:0005112)
0.0	0.1	GO:0016721	superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0	0.7	GO:0005347	ATP transmembrane transporter activity(GO:0005347)
0.0	0.2	GO:0016251	obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.0	0.1	GO:0017150	tRNA dihydrouridine synthase activity(GO:0017150)
0.0	0.1	GO:0070698	type I activin receptor binding(GO:0070698)
0.0	0.0	GO:0015119	hexose phosphate transmembrane transporter activity(GO:0015119) organophosphate:inorganic phosphate antiporter activity(GO:0015315) hexose-phosphate:inorganic phosphate antiporter activity(GO:0015526) glucose 6-phosphate:inorganic phosphate antiporter activity(GO:0061513)
0.0	0.2	GO:0003689	DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0	0.2	GO:0005324	long-chain fatty acid transporter activity(GO:0005324)
0.0	0.2	GO:0061578	Lys63-specific deubiquitinase activity(GO:0061578)
0.0	0.1	GO:0003835	beta-galactoside alpha-2,6-sialyltransferase activity(GO:0003835)
0.0	0.7	GO:0031491	nucleosome binding(GO:0031491)
0.0	0.1	GO:1990050	phosphatidic acid transporter activity(GO:1990050)
0.0	0.2	GO:0061575	cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575)
0.0	0.1	GO:0016530	metallochaperone activity(GO:0016530)
0.0	0.2	GO:0002020	protease binding(GO:0002020)
0.0	0.2	GO:0004535	poly(A)-specific ribonuclease activity(GO:0004535)
0.0	0.4	GO:0005164	tumor necrosis factor receptor binding(GO:0005164)
0.0	0.4	GO:0017147	Wnt-protein binding(GO:0017147)
0.0	0.2	GO:0016881	acid-amino acid ligase activity(GO:0016881)
0.0	0.1	GO:0019960	C-X3-C chemokine binding(GO:0019960) protein binding involved in cell-matrix adhesion(GO:0098634) collagen binding involved in cell-matrix adhesion(GO:0098639)
0.0	0.1	GO:0038132	neuregulin receptor activity(GO:0038131) neuregulin binding(GO:0038132)
0.0	0.2	GO:0004709	MAP kinase kinase kinase activity(GO:0004709)
0.0	0.1	GO:0004045	aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0	0.3	GO:0001540	beta-amyloid binding(GO:0001540)
0.0	0.2	GO:0004622	lysophospholipase activity(GO:0004622)
0.0	0.2	GO:0000175	3'-5'-exoribonuclease activity(GO:0000175)
0.0	0.0	GO:0001607	neuromedin U receptor activity(GO:0001607)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.5	PID HIF2PATHWAY	HIF-2-alpha transcription factor network
0.1	0.4	SA REG CASCADE OF CYCLIN EXPR	Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases.
0.0	1.5	PID FOXM1 PATHWAY	FOXM1 transcription factor network
0.0	1.9	PID PLK1 PATHWAY	PLK1 signaling events
0.0	2.1	PID BETA CATENIN NUC PATHWAY	Regulation of nuclear beta catenin signaling and target gene transcription
0.0	0.3	PID INTEGRIN4 PATHWAY	Alpha6 beta4 integrin-ligand interactions
0.0	0.1	PID VEGFR1 PATHWAY	VEGFR1 specific signals
0.0	0.8	PID LKB1 PATHWAY	LKB1 signaling events
0.0	0.2	PID BETA CATENIN DEG PATHWAY	Degradation of beta catenin
0.0	0.1	SA G1 AND S PHASES	Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition.
0.0	1.0	PID AR PATHWAY	Coregulation of Androgen receptor activity
0.0	0.3	PID HDAC CLASSIII PATHWAY	Signaling events mediated by HDAC Class III
0.0	0.2	PID AURORA A PATHWAY	Aurora A signaling
0.0	0.6	PID DELTA NP63 PATHWAY	Validated transcriptional targets of deltaNp63 isoforms
0.0	0.2	PID LPA4 PATHWAY	LPA4-mediated signaling events
0.0	0.4	PID CASPASE PATHWAY	Caspase cascade in apoptosis
0.0	0.3	PID HIV NEF PATHWAY	HIV-1 Nef: Negative effector of Fas and TNF-alpha

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	2.7	REACTOME RESOLUTION OF AP SITES VIA THE SINGLE NUCLEOTIDE REPLACEMENT PATHWAY	Genes involved in Resolution of AP sites via the single-nucleotide replacement pathway
0.1	0.6	REACTOME REGULATION OF AMPK ACTIVITY VIA LKB1	Genes involved in Regulation of AMPK activity via LKB1
0.0	0.8	REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX	Genes involved in CDC6 association with the ORC:origin complex
0.0	0.4	REACTOME ENDOGENOUS STEROLS	Genes involved in Endogenous sterols
0.0	0.2	REACTOME THE NLRP3 INFLAMMASOME	Genes involved in The NLRP3 inflammasome
0.0	0.5	REACTOME SYNTHESIS OF PIPS AT THE LATE ENDOSOME MEMBRANE	Genes involved in Synthesis of PIPs at the late endosome membrane
0.0	0.2	REACTOME RECYCLING OF BILE ACIDS AND SALTS	Genes involved in Recycling of bile acids and salts
0.0	0.1	REACTOME ETHANOL OXIDATION	Genes involved in Ethanol oxidation
0.0	0.2	REACTOME SIGNALING BY NODAL	Genes involved in Signaling by NODAL
0.0	0.2	REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS	Genes involved in Facilitative Na+-independent glucose transporters
0.0	0.5	REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION	Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression
0.0	0.4	REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION	Genes involved in Cyclin A/B1 associated events during G2/M transition
0.0	0.5	REACTOME SIGNALING BY HIPPO	Genes involved in Signaling by Hippo
0.0	0.7	REACTOME ELONGATION ARREST AND RECOVERY	Genes involved in Elongation arrest and recovery
0.0	0.8	REACTOME MEIOTIC SYNAPSIS	Genes involved in Meiotic Synapsis
0.0	0.3	REACTOME RNA POL III TRANSCRIPTION TERMINATION	Genes involved in RNA Polymerase III Transcription Termination
0.0	1.2	REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES	Genes involved in Loss of Nlp from mitotic centrosomes
0.0	0.2	REACTOME ACTIVATION OF CHAPERONES BY ATF6 ALPHA	Genes involved in Activation of Chaperones by ATF6-alpha
0.0	0.4	REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION	Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.0	0.3	REACTOME DOWNREGULATION OF SMAD2 3 SMAD4 TRANSCRIPTIONAL ACTIVITY	Genes involved in Downregulation of SMAD2/3:SMAD4 transcriptional activity
0.0	0.2	REACTOME CIRCADIAN CLOCK	Genes involved in Circadian Clock
0.0	0.4	REACTOME G1 S SPECIFIC TRANSCRIPTION	Genes involved in G1/S-Specific Transcription
0.0	0.4	REACTOME MRNA SPLICING MINOR PATHWAY	Genes involved in mRNA Splicing - Minor Pathway
0.0	0.2	REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1	Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1
0.0	0.4	REACTOME DOUBLE STRAND BREAK REPAIR	Genes involved in Double-Strand Break Repair
0.0	0.9	REACTOME METABOLISM OF VITAMINS AND COFACTORS	Genes involved in Metabolism of vitamins and cofactors
0.0	0.3	REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS	Genes involved in Synthesis of substrates in N-glycan biosythesis
0.0	0.2	REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY	Genes involved in Adenylate cyclase activating pathway
0.0	0.4	REACTOME EXTENSION OF TELOMERES	Genes involved in Extension of Telomeres
0.0	0.1	REACTOME REGULATION OF IFNA SIGNALING	Genes involved in Regulation of IFNA signaling
0.0	0.2	REACTOME ACTIVATION OF RAC	Genes involved in Activation of Rac
0.0	0.1	REACTOME COPI MEDIATED TRANSPORT	Genes involved in COPI Mediated Transport
0.0	0.1	REACTOME ALPHA LINOLENIC ACID ALA METABOLISM	Genes involved in alpha-linolenic acid (ALA) metabolism
0.0	0.4	REACTOME MYOGENESIS	Genes involved in Myogenesis
0.0	0.1	REACTOME MRNA DECAY BY 3 TO 5 EXORIBONUCLEASE	Genes involved in mRNA Decay by 3' to 5' Exoribonuclease
0.0	0.4	REACTOME O LINKED GLYCOSYLATION OF MUCINS	Genes involved in O-linked glycosylation of mucins
0.0	0.3	REACTOME G1 PHASE	Genes involved in G1 Phase