PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
dharma | dr11_v1_chr15_-_29012493_29012493 | -0.29 | 2.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_-_8030583 Show fit | 0.54 |
ENSDART00000113628
|
si:ch211-240l19.8 |
|
chr3_-_55128258 Show fit | 0.53 |
ENSDART00000101734
|
hemoglobin, alpha embryonic 1 |
|
chr14_-_25928899 Show fit | 0.43 |
ENSDART00000143518
|
GTPase activating protein (SH3 domain) binding protein 1 |
|
chr7_+_8456999 Show fit | 0.41 |
ENSDART00000172880
|
jacalin 4 |
|
chr3_+_25508247 Show fit | 0.39 |
ENSDART00000039448
|
melanin-concentrating hormone receptor 1b |
|
chr20_+_53441935 Show fit | 0.35 |
ENSDART00000175214
|
apolipoprotein Bb, tandem duplicate 2 |
|
chr22_-_26005894 Show fit | 0.33 |
ENSDART00000105088
|
platelet-derived growth factor alpha polypeptide a |
|
chr22_-_26100282 Show fit | 0.32 |
ENSDART00000166075
|
platelet-derived growth factor alpha polypeptide a |
|
chr22_-_6404807 Show fit | 0.32 |
ENSDART00000149399
ENSDART00000063420 |
si:rp71-1i20.2 |
|
chr14_-_25985698 Show fit | 0.30 |
ENSDART00000172909
ENSDART00000123053 |
antioxidant 1 copper chaperone |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.7 | GO:0003261 | cardiac muscle progenitor cell migration to the midline involved in heart field formation(GO:0003261) |
0.1 | 0.4 | GO:0000455 | enzyme-directed rRNA pseudouridine synthesis(GO:0000455) |
0.1 | 0.4 | GO:0006642 | triglyceride mobilization(GO:0006642) |
0.1 | 0.3 | GO:0008635 | activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c(GO:0008635) |
0.0 | 0.3 | GO:0006878 | cellular copper ion homeostasis(GO:0006878) |
0.0 | 0.3 | GO:0090385 | phagosome-lysosome fusion(GO:0090385) |
0.1 | 0.2 | GO:0035773 | insulin secretion involved in cellular response to glucose stimulus(GO:0035773) regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0061178) |
0.1 | 0.2 | GO:0065001 | specification of axis polarity(GO:0065001) |
0.1 | 0.2 | GO:1902767 | farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767) |
0.1 | 0.2 | GO:0044333 | Wnt signaling pathway involved in digestive tract morphogenesis(GO:0044333) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | GO:0005763 | organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763) |
0.1 | 0.4 | GO:0034359 | mature chylomicron(GO:0034359) |
0.0 | 0.4 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
0.0 | 0.3 | GO:0030687 | preribosome, large subunit precursor(GO:0030687) |
0.0 | 0.2 | GO:0098574 | cytoplasmic side of lysosomal membrane(GO:0098574) |
0.0 | 0.2 | GO:0034464 | BBSome(GO:0034464) |
0.0 | 0.2 | GO:0005869 | dynactin complex(GO:0005869) |
0.0 | 0.2 | GO:0036038 | MKS complex(GO:0036038) |
0.0 | 0.1 | GO:0048500 | signal recognition particle, endoplasmic reticulum targeting(GO:0005786) signal recognition particle(GO:0048500) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.7 | GO:0005161 | platelet-derived growth factor receptor binding(GO:0005161) |
0.1 | 0.4 | GO:0030273 | melanin-concentrating hormone receptor activity(GO:0030273) |
0.1 | 0.4 | GO:0034632 | retinol transporter activity(GO:0034632) |
0.0 | 0.4 | GO:0050750 | low-density lipoprotein particle receptor binding(GO:0050750) lipoprotein particle receptor binding(GO:0070325) |
0.0 | 0.4 | GO:0009982 | pseudouridine synthase activity(GO:0009982) |
0.1 | 0.3 | GO:0016531 | copper chaperone activity(GO:0016531) |
0.1 | 0.2 | GO:0004421 | hydroxymethylglutaryl-CoA synthase activity(GO:0004421) |
0.0 | 0.2 | GO:0017070 | U6 snRNA binding(GO:0017070) |
0.0 | 0.2 | GO:0061608 | nuclear import signal receptor activity(GO:0061608) |
0.0 | 0.2 | GO:0061575 | cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.2 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.2 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |