PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
egr4 | dr11_v1_chr23_+_45579497_45579497 | 0.84 | 5.8e-06 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_44963154 Show fit | 1.76 |
ENSDART00000073735
|
Ras-related associated with diabetes |
|
chr22_+_20720808 Show fit | 1.74 |
ENSDART00000171321
|
si:dkey-211f22.5 |
|
chr25_+_30298377 Show fit | 1.64 |
ENSDART00000153622
|
chromosome 11 open reading frame 96 |
|
chr14_+_15155684 Show fit | 1.42 |
ENSDART00000167966
|
zgc:158852 |
|
chr6_+_40661703 Show fit | 1.29 |
ENSDART00000142492
|
enolase 1b, (alpha) |
|
chr2_-_31301929 Show fit | 1.18 |
ENSDART00000191992
ENSDART00000190723 |
adenylate cyclase activating polypeptide 1b |
|
chr8_+_23165749 Show fit | 1.12 |
ENSDART00000063057
|
DnaJ (Hsp40) homolog, subfamily C, member 5aa |
|
chr25_+_13406069 Show fit | 1.05 |
ENSDART00000010495
|
zinc and ring finger 1 |
|
chr17_+_27456804 Show fit | 1.05 |
ENSDART00000017756
ENSDART00000181461 ENSDART00000180178 |
cathepsin L.1 |
|
chr23_+_41799748 Show fit | 1.01 |
ENSDART00000144257
|
prodynorphin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.7 | GO:0007218 | neuropeptide signaling pathway(GO:0007218) |
0.4 | 1.8 | GO:1901842 | regulation of high voltage-gated calcium channel activity(GO:1901841) negative regulation of high voltage-gated calcium channel activity(GO:1901842) |
0.0 | 1.5 | GO:0048841 | regulation of axon extension involved in axon guidance(GO:0048841) |
0.2 | 1.3 | GO:0032889 | regulation of vacuole fusion, non-autophagic(GO:0032889) |
0.0 | 1.1 | GO:0070936 | protein K48-linked ubiquitination(GO:0070936) |
0.1 | 0.7 | GO:0001886 | endothelial cell morphogenesis(GO:0001886) |
0.0 | 0.7 | GO:0043462 | regulation of ATPase activity(GO:0043462) |
0.1 | 0.6 | GO:0070262 | peptidyl-serine dephosphorylation(GO:0070262) |
0.0 | 0.6 | GO:0071542 | dopaminergic neuron differentiation(GO:0071542) |
0.0 | 0.6 | GO:1904029 | regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0000079) regulation of cyclin-dependent protein kinase activity(GO:1904029) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.7 | GO:0043679 | axon terminus(GO:0043679) |
0.2 | 1.3 | GO:0000015 | phosphopyruvate hydratase complex(GO:0000015) |
0.0 | 1.2 | GO:0043204 | perikaryon(GO:0043204) |
0.0 | 0.7 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.0 | 0.6 | GO:0033180 | proton-transporting V-type ATPase, V1 domain(GO:0033180) |
0.0 | 0.6 | GO:0000159 | protein phosphatase type 2A complex(GO:0000159) |
0.1 | 0.3 | GO:0032937 | SREBP-SCAP-Insig complex(GO:0032937) |
0.0 | 0.3 | GO:0031680 | G-protein beta/gamma-subunit complex(GO:0031680) |
0.0 | 0.3 | GO:0030131 | clathrin adaptor complex(GO:0030131) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.3 | GO:0005246 | calcium channel regulator activity(GO:0005246) |
0.1 | 1.7 | GO:0031628 | opioid receptor binding(GO:0031628) |
0.2 | 1.3 | GO:0004634 | phosphopyruvate hydratase activity(GO:0004634) |
0.3 | 1.2 | GO:0016521 | pituitary adenylate cyclase activating polypeptide activity(GO:0016521) |
0.0 | 0.9 | GO:0030170 | pyridoxal phosphate binding(GO:0030170) |
0.1 | 0.7 | GO:0042030 | ATPase inhibitor activity(GO:0042030) |
0.0 | 0.7 | GO:0038191 | neuropilin binding(GO:0038191) |
0.1 | 0.6 | GO:0004373 | glycogen (starch) synthase activity(GO:0004373) |
0.0 | 0.6 | GO:0005184 | neuropeptide hormone activity(GO:0005184) |
0.0 | 0.5 | GO:0051721 | protein phosphatase 2A binding(GO:0051721) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.0 | 0.6 | PID INSULIN GLUCOSE PATHWAY | Insulin-mediated glucose transport |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.0 | REACTOME G PROTEIN ACTIVATION | Genes involved in G-protein activation |
0.1 | 0.6 | REACTOME TRANSFERRIN ENDOCYTOSIS AND RECYCLING | Genes involved in Transferrin endocytosis and recycling |
0.0 | 0.6 | REACTOME GLUCOSE METABOLISM | Genes involved in Glucose metabolism |
0.0 | 0.1 | REACTOME ERKS ARE INACTIVATED | Genes involved in ERKs are inactivated |