PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
eomesa | dr11_v1_chr19_-_867071_867071 | -0.58 | 9.3e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_2602445 Show fit | 1.97 |
ENSDART00000166910
|
eukaryotic translation termination factor 1a |
|
chr2_-_32637592 Show fit | 1.76 |
ENSDART00000136353
|
si:dkeyp-73d8.8 |
|
chr13_-_7031033 Show fit | 1.41 |
ENSDART00000193211
|
|
|
chr3_+_59051503 Show fit | 1.22 |
ENSDART00000160767
|
rasd family member 4 |
|
chr20_-_14665002 Show fit | 1.05 |
ENSDART00000152816
|
secernin 2 |
|
chr1_-_40015782 Show fit | 1.05 |
ENSDART00000157425
ENSDART00000159238 |
cyclin-dependent kinase 2 associated protein 2 |
|
chr25_-_13703826 Show fit | 0.92 |
ENSDART00000163398
|
phospholipase A2, group XV |
|
chr15_-_21877726 Show fit | 0.90 |
ENSDART00000127819
ENSDART00000145646 ENSDART00000100897 ENSDART00000144739 |
zgc:162608 |
|
chr22_+_25274712 Show fit | 0.86 |
ENSDART00000137341
|
|
|
chr20_-_40755614 Show fit | 0.84 |
ENSDART00000061247
|
connexin 32.3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 2.0 | GO:0002184 | cytoplasmic translational termination(GO:0002184) |
0.0 | 1.3 | GO:0003323 | type B pancreatic cell development(GO:0003323) |
0.0 | 1.2 | GO:0031101 | fin regeneration(GO:0031101) |
0.2 | 0.9 | GO:0010873 | regulation of cholesterol esterification(GO:0010872) positive regulation of cholesterol esterification(GO:0010873) |
0.0 | 0.8 | GO:0038034 | signal transduction in absence of ligand(GO:0038034) extrinsic apoptotic signaling pathway in absence of ligand(GO:0097192) |
0.0 | 0.8 | GO:0014046 | dopamine secretion(GO:0014046) regulation of dopamine secretion(GO:0014059) |
0.0 | 0.7 | GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502) |
0.1 | 0.6 | GO:0002523 | leukocyte migration involved in inflammatory response(GO:0002523) |
0.0 | 0.6 | GO:0045494 | photoreceptor cell maintenance(GO:0045494) |
0.1 | 0.5 | GO:0051876 | pigment granule dispersal(GO:0051876) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 2.0 | GO:0018444 | translation release factor complex(GO:0018444) |
0.1 | 0.9 | GO:0042627 | chylomicron(GO:0042627) |
0.2 | 0.7 | GO:0032998 | Fc receptor complex(GO:0032997) Fc-epsilon receptor I complex(GO:0032998) |
0.0 | 0.6 | GO:0045271 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.0 | 0.6 | GO:0030864 | cortical actin cytoskeleton(GO:0030864) |
0.1 | 0.3 | GO:0019008 | molybdopterin synthase complex(GO:0019008) |
0.0 | 0.2 | GO:1990923 | PET complex(GO:1990923) |
0.0 | 0.1 | GO:0005742 | mitochondrial outer membrane translocase complex(GO:0005742) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 2.0 | GO:1990825 | sequence-specific mRNA binding(GO:1990825) |
0.0 | 1.2 | GO:0019003 | GDP binding(GO:0019003) |
0.2 | 0.9 | GO:0060228 | phosphatidylcholine-sterol O-acyltransferase activator activity(GO:0060228) |
0.2 | 0.9 | GO:0070004 | cysteine-type exopeptidase activity(GO:0070004) |
0.0 | 0.9 | GO:0004806 | triglyceride lipase activity(GO:0004806) |
0.1 | 0.8 | GO:0004526 | ribonuclease P activity(GO:0004526) |
0.0 | 0.8 | GO:0001786 | phosphatidylserine binding(GO:0001786) |
0.2 | 0.7 | GO:0019767 | immunoglobulin receptor activity(GO:0019763) IgE receptor activity(GO:0019767) |
0.1 | 0.7 | GO:0004865 | protein serine/threonine phosphatase inhibitor activity(GO:0004865) |
0.0 | 0.7 | GO:0015459 | potassium channel regulator activity(GO:0015459) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.7 | PID FOXO PATHWAY | FoxO family signaling |
0.0 | 0.6 | PID CONE PATHWAY | Visual signal transduction: Cones |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.4 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.0 | 0.3 | REACTOME FGFR1 LIGAND BINDING AND ACTIVATION | Genes involved in FGFR1 ligand binding and activation |
0.0 | 0.2 | REACTOME SEROTONIN RECEPTORS | Genes involved in Serotonin receptors |