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PRJEB1986: zebrafish developmental stages transcriptome

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Results for foxk1_foxj3

Z-value: 0.38

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Transcription factors associated with foxk1_foxj3

Gene Symbol Gene ID Gene Info
foxk1
ENSDARG00000037872 forkhead box K1
foxj3
ENSDARG00000075774 forkhead box J3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
foxk1dr11_v1_chr3_-_40933415_409334150.155.3e-01Click!
foxj3dr11_v1_chr11_-_26362294_26362334-0.077.9e-01Click!

Activity profile of foxk1_foxj3 motif

Sorted Z-values of foxk1_foxj3 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr5_+_24305877 1.29 ENSDART00000144226
ctsll
cathepsin L, like
chr14_-_41478265 1.04 ENSDART00000149886
ENSDART00000016002
tspan7
tetraspanin 7
chr17_+_21295132 1.02 ENSDART00000103845
eno4
enolase family member 4
chr14_-_35462148 1.01 ENSDART00000045809
srpx2
sushi-repeat containing protein, X-linked 2
chr7_-_60831082 0.99 ENSDART00000073654
ENSDART00000136999
pcxb
pyruvate carboxylase b
chr14_+_26439227 0.98 ENSDART00000054183
gpr137
G protein-coupled receptor 137
chr15_+_19990068 0.91 ENSDART00000154033
ENSDART00000054428
zgc:112083
zgc:112083
chr23_-_28025943 0.90 ENSDART00000181146
sp5l
Sp5 transcription factor-like
chr5_-_51998708 0.85 ENSDART00000097194
serinc5
serine incorporator 5
chr18_-_24988645 0.84 ENSDART00000136434
ENSDART00000085735
chd2
chromodomain helicase DNA binding protein 2
chr25_-_13408760 0.80 ENSDART00000154445
gins3
GINS complex subunit 3
chr8_-_16697912 0.79 ENSDART00000076542
rpe65b
retinal pigment epithelium-specific protein 65b
chr20_+_25904199 0.73 ENSDART00000016864
slc35f6
solute carrier family 35, member F6
chr9_+_41459759 0.63 ENSDART00000132501
ENSDART00000100265
nemp2
nuclear envelope integral membrane protein 2
chr5_+_12528693 0.62 ENSDART00000051670
rfc5
replication factor C (activator 1) 5
chr23_+_7692042 0.62 ENSDART00000018512
pofut1
protein O-fucosyltransferase 1
chr15_-_17960228 0.61 ENSDART00000155898
phldb1b
pleckstrin homology-like domain, family B, member 1b
chr15_+_26933196 0.61 ENSDART00000023842
ppm1da
protein phosphatase, Mg2+/Mn2+ dependent, 1Da
chr15_+_34069746 0.60 ENSDART00000163513
arl4aa
ADP-ribosylation factor-like 4aa
chr12_+_45238292 0.59 ENSDART00000057983
mrpl38
mitochondrial ribosomal protein L38
chr18_+_6857071 0.56 ENSDART00000018735
ENSDART00000181969
dnaja2l
DnaJ (Hsp40) homolog, subfamily A, member 2, like
chr7_+_46019780 0.56 ENSDART00000163991
ccne1
cyclin E1
chr5_-_54672763 0.55 ENSDART00000159009
spag8
sperm associated antigen 8
chr6_-_40922971 0.54 ENSDART00000155363
sfi1
SFI1 centrin binding protein
chr13_+_5978809 0.54 ENSDART00000102563
ENSDART00000121598
phf10
PHD finger protein 10
chr19_+_25971000 0.53 ENSDART00000089836
jarid2b
jumonji, AT rich interactive domain 2b
chr9_-_12885201 0.50 ENSDART00000124957
ankzf1
ankyrin repeat and zinc finger domain containing 1
chr10_+_20070178 0.49 ENSDART00000027612
ENSDART00000145264
ENSDART00000172713
xpo7
exportin 7
chr24_-_6678640 0.48 ENSDART00000042478
enkur
enkurin, TRPC channel interacting protein
chr11_+_2710530 0.47 ENSDART00000132768
ENSDART00000030921
ENSDART00000040147
mapk14b
mitogen-activated protein kinase 14b
chr14_-_38843690 0.46 ENSDART00000183629
spdl1
spindle apparatus coiled-coil protein 1
chr15_-_28805493 0.45 ENSDART00000179617
cd3eap
CD3e molecule, epsilon associated protein
chr16_+_9580699 0.45 ENSDART00000165565
taf2
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor
chr5_-_20446082 0.44 ENSDART00000051607
ISCU (1 of many)
si:ch211-191d15.2
chr2_-_42109575 0.43 ENSDART00000075551
adhfe1
alcohol dehydrogenase, iron containing, 1
chr2_+_16696052 0.43 ENSDART00000022356
ENSDART00000164329
ppp1r7
protein phosphatase 1, regulatory (inhibitor) subunit 7
chr1_-_12394048 0.43 ENSDART00000146067
ENSDART00000134708
sclt1
sodium channel and clathrin linker 1
chr5_+_26913120 0.42 ENSDART00000126609
tbx3b
T-box 3b
chr23_-_17450746 0.41 ENSDART00000145399
ENSDART00000136457
ENSDART00000133125
ENSDART00000145719
ENSDART00000147524
ENSDART00000005366
ENSDART00000104680
tpd52l2b
tumor protein D52-like 2b
chr5_+_22836364 0.41 ENSDART00000131885
si:ch211-26b3.2
si:ch211-26b3.2
chr11_-_25257045 0.40 ENSDART00000130477
snai1a
snail family zinc finger 1a
chr12_+_8822717 0.39 ENSDART00000021628
reep3b
receptor accessory protein 3b
chr16_+_28578352 0.39 ENSDART00000149306
nmt2
N-myristoyltransferase 2
chr5_-_66749535 0.39 ENSDART00000132183
kat5b
K(lysine) acetyltransferase 5b
chr2_+_27386617 0.39 ENSDART00000134976
si:ch73-382f3.1
si:ch73-382f3.1
chr8_+_10305400 0.38 ENSDART00000172400
pim1
Pim-1 proto-oncogene, serine/threonine kinase
chr15_-_44052927 0.38 ENSDART00000166209
wu:fb44b02
wu:fb44b02
chr13_-_33207367 0.37 ENSDART00000146138
ENSDART00000109667
ENSDART00000182741
trip11
thyroid hormone receptor interactor 11
chr18_+_25225524 0.37 ENSDART00000055563
si:dkeyp-59c12.1
si:dkeyp-59c12.1
chr17_-_2690083 0.37 ENSDART00000135374
ptpn21
protein tyrosine phosphatase, non-receptor type 21
chr3_+_42999844 0.37 ENSDART00000183950
ints1
integrator complex subunit 1
chr8_-_39859688 0.36 ENSDART00000019907
unc119.1
unc-119 homolog 1
chr2_+_55365727 0.35 ENSDART00000162943
FP245456.1

chr7_+_40205394 0.35 ENSDART00000173742
ENSDART00000148390
ncapg2
non-SMC condensin II complex, subunit G2
chr22_+_37631234 0.35 ENSDART00000007346
psmd1
proteasome 26S subunit, non-ATPase 1
chr22_-_34979139 0.35 ENSDART00000116455
ENSDART00000133537
arhgap19
Rho GTPase activating protein 19
chr20_-_9428021 0.35 ENSDART00000025330
rdh14b
retinol dehydrogenase 14b
chr1_-_23370395 0.35 ENSDART00000143014
ENSDART00000126785
ENSDART00000159138
pds5a
PDS5 cohesin associated factor A
chr11_-_25257595 0.35 ENSDART00000123567
snai1a
snail family zinc finger 1a
chr9_+_24088062 0.34 ENSDART00000126198
lrrfip1a
leucine rich repeat (in FLII) interacting protein 1a
chr5_+_49744713 0.34 ENSDART00000133384
nr2f1a
nuclear receptor subfamily 2, group F, member 1a
chr17_-_14966384 0.34 ENSDART00000105064
txndc16
thioredoxin domain containing 16
chr17_+_37215820 0.34 ENSDART00000104009
slc30a1b
solute carrier family 30 (zinc transporter), member 1b
chr13_+_35635672 0.34 ENSDART00000148481
thbs2a
thrombospondin 2a
chr1_+_17593392 0.33 ENSDART00000078889
helt
helt bHLH transcription factor
chr10_+_39084354 0.33 ENSDART00000158245
si:ch73-1a9.3
si:ch73-1a9.3
chr3_+_42999277 0.33 ENSDART00000163595
ints1
integrator complex subunit 1
chr16_-_26820634 0.33 ENSDART00000111156
pdp1
pyruvate dehyrogenase phosphatase catalytic subunit 1
chr11_+_18612421 0.33 ENSDART00000110621
ncoa3
nuclear receptor coactivator 3
chr5_+_13549603 0.32 ENSDART00000171270
ckap2l
cytoskeleton associated protein 2-like
chr23_-_3758637 0.31 ENSDART00000131536
ENSDART00000139408
ENSDART00000137826
hmga1a
high mobility group AT-hook 1a
chr4_-_4256300 0.31 ENSDART00000103319
ENSDART00000150279
cd9b
CD9 molecule b
chr6_-_8466717 0.31 ENSDART00000151577
ENSDART00000151800
ENSDART00000151227
si:dkey-217d24.6
si:dkey-217d24.6
chr7_+_5530154 0.31 ENSDART00000181610
si:dkeyp-67a8.4
si:dkeyp-67a8.4
chr21_-_13661631 0.31 ENSDART00000184408
pnpla7a
patatin-like phospholipase domain containing 7a
chr24_+_19542323 0.30 ENSDART00000140379
ENSDART00000142830
sulf1
sulfatase 1
chr7_-_13906409 0.30 ENSDART00000062257
slc39a1
solute carrier family 39 (zinc transporter), member 1
chr9_-_1990323 0.30 ENSDART00000082332
hoxd13a
homeobox D13a
chr13_-_23665580 0.30 ENSDART00000144282
map3k21
mitogen-activated protein kinase kinase kinase 21
chr20_-_23171430 0.30 ENSDART00000109234
spata18
spermatogenesis associated 18
chr23_-_32304650 0.30 ENSDART00000143772
ENSDART00000085642
ENSDART00000188989
dgkaa
diacylglycerol kinase, alpha a
chr9_+_52411530 0.30 ENSDART00000163684
nme8
NME/NM23 family member 8
chr17_+_4325693 0.30 ENSDART00000154264
mcm8
minichromosome maintenance 8 homologous recombination repair factor
chr19_+_20177887 0.30 ENSDART00000008595
tra2a
transformer 2 alpha homolog
chr9_+_21306902 0.30 ENSDART00000138554
ENSDART00000004108
xpo4
exportin 4
chr13_-_5257303 0.29 ENSDART00000110610
si:dkey-78p8.1
si:dkey-78p8.1
chr11_+_16153207 0.29 ENSDART00000192356
tada3l
transcriptional adaptor 3 (NGG1 homolog, yeast)-like
chr23_+_32029304 0.28 ENSDART00000185217
tpx2
TPX2, microtubule-associated, homolog (Xenopus laevis)
chr15_-_18232712 0.28 ENSDART00000081199
wu:fj20b03
wu:fj20b03
chr12_+_19188542 0.28 ENSDART00000134726
ENSDART00000148011
ENSDART00000109541
cby1
chibby homolog 1 (Drosophila)
chr19_-_22843480 0.28 ENSDART00000052503
nudcd1
NudC domain containing 1
chr11_+_16152316 0.28 ENSDART00000081054
tada3l
transcriptional adaptor 3 (NGG1 homolog, yeast)-like
chr16_+_26732086 0.27 ENSDART00000138496
rad54b
RAD54 homolog B (S. cerevisiae)
chr24_+_37640626 0.27 ENSDART00000008047
wdr24
WD repeat domain 24
chr6_-_39700965 0.27 ENSDART00000156645
espl1
extra spindle pole bodies like 1, separase
chr8_-_1267247 0.27 ENSDART00000150064
cdc14b
cell division cycle 14B
chr8_+_26034623 0.27 ENSDART00000004521
ENSDART00000142555
arih2
ariadne homolog 2 (Drosophila)
chr17_+_24718272 0.27 ENSDART00000007271
mtfr1l
mitochondrial fission regulator 1-like
chr13_+_29925397 0.27 ENSDART00000123482
cuedc2
CUE domain containing 2
chr7_-_46019756 0.27 ENSDART00000162583
zgc:162297
zgc:162297
chr23_-_10722664 0.27 ENSDART00000146526
ENSDART00000129022
ENSDART00000104985
foxp1a
forkhead box P1a
chr8_-_16712111 0.27 ENSDART00000184147
ENSDART00000180419
ENSDART00000076600
rpe65c
retinal pigment epithelium-specific protein 65c
chr11_+_25257022 0.26 ENSDART00000156052
tp53inp2
tumor protein p53 inducible nuclear protein 2
chr14_+_94946 0.26 ENSDART00000165766
ENSDART00000163778
mcm7
minichromosome maintenance complex component 7
chr21_+_25071805 0.26 ENSDART00000078651
dixdc1b
DIX domain containing 1b
chr13_+_42602406 0.26 ENSDART00000133388
ENSDART00000147996
mlh1
mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)
chr16_+_25011994 0.25 ENSDART00000157312
znf1035
zinc finger protein 1035
chr25_+_13662606 0.25 ENSDART00000008989
ccdc113
coiled-coil domain containing 113
chr1_+_53945934 0.25 ENSDART00000052838
acta1a
actin, alpha 1a, skeletal muscle
chr20_-_16849306 0.25 ENSDART00000131395
ENSDART00000027582
brms1lb
breast cancer metastasis-suppressor 1-like b
chr21_-_27272657 0.25 ENSDART00000040754
ENSDART00000175009
mark2a
MAP/microtubule affinity-regulating kinase 2a
chr2_-_30200206 0.25 ENSDART00000130142
ube2w
ubiquitin-conjugating enzyme E2W (putative)
chr4_-_20135919 0.25 ENSDART00000172230
cep83
centrosomal protein 83
chr14_+_6962271 0.24 ENSDART00000148447
ENSDART00000149114
ENSDART00000149492
ENSDART00000148394
hnrnpaba
heterogeneous nuclear ribonucleoprotein A/Ba
chr21_+_17051478 0.24 ENSDART00000047201
ENSDART00000161650
ENSDART00000167298
atp2a2a
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a
chr6_-_35309661 0.24 ENSDART00000114960
nos1apa
nitric oxide synthase 1 (neuronal) adaptor protein a
chr11_-_16152400 0.24 ENSDART00000123665
arpc4l
actin related protein 2/3 complex, subunit 4, like
chr4_-_20135406 0.24 ENSDART00000161343
cep83
centrosomal protein 83
chr17_+_24036791 0.24 ENSDART00000140767
b3gnt2b
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b
chr12_+_30726425 0.24 ENSDART00000153275
slc35f3a
solute carrier family 35, member F3a
chr17_-_27266053 0.23 ENSDART00000110903
E2F2
si:ch211-160f23.5
chr25_+_18953575 0.23 ENSDART00000155610
tdg.2
thymine DNA glycosylase, tandem duplicate 2
chr15_+_37589698 0.23 ENSDART00000076066
ENSDART00000153894
ENSDART00000156298
lin37
lin-37 DREAM MuvB core complex component
chr4_+_27100531 0.23 ENSDART00000115200
alg12
ALG12, alpha-1,6-mannosyltransferase
chr17_+_16755287 0.23 ENSDART00000080129
ston2
stonin 2
chr5_-_24008997 0.23 ENSDART00000066645
eif1axa
eukaryotic translation initiation factor 1A, X-linked, a
chr16_-_41131578 0.23 ENSDART00000102649
ENSDART00000145956
ptpn23a
protein tyrosine phosphatase, non-receptor type 23, a
chr22_-_16154771 0.22 ENSDART00000009464
slc30a7
solute carrier family 30 (zinc transporter), member 7
chr23_+_32028574 0.22 ENSDART00000145501
ENSDART00000143121
ENSDART00000111877
tpx2
TPX2, microtubule-associated, homolog (Xenopus laevis)
chr5_+_44846434 0.22 ENSDART00000145299
ENSDART00000136521
kank1a
KN motif and ankyrin repeat domains 1a
chr6_-_14038804 0.22 ENSDART00000184606
ENSDART00000184609
etv5b
ets variant 5b
chr13_-_25842074 0.22 ENSDART00000015154
papolg
poly(A) polymerase gamma
chr23_+_31596441 0.22 ENSDART00000053534
tbpl1
TBP-like 1
chr4_-_6373735 0.21 ENSDART00000140100
MDFIC
si:ch73-156e19.1
chr10_-_36633882 0.21 ENSDART00000077161
ENSDART00000137688
rsf1b.1
rsf1b.1
remodeling and spacing factor 1b, tandem duplicate 1
remodeling and spacing factor 1b, tandem duplicate 1
chr25_+_2263857 0.20 ENSDART00000076439
yars2
tyrosyl-tRNA synthetase 2, mitochondrial
chr23_-_10723009 0.20 ENSDART00000189721
foxp1a
forkhead box P1a
chr19_-_47997424 0.20 ENSDART00000081675
ctnnb2
catenin, beta 2
chr5_-_19014589 0.20 ENSDART00000002624
ranbp1
RAN binding protein 1
chr9_-_30555725 0.19 ENSDART00000079222
chaf1b
chromatin assembly factor 1, subunit B
chr8_-_7567815 0.19 ENSDART00000132536
hcfc1b
host cell factor C1b
chr19_-_10881141 0.19 ENSDART00000162793
psmd4a
proteasome 26S subunit, non-ATPase 4a
chr24_-_19718077 0.19 ENSDART00000109107
ENSDART00000056082
csrnp1b
cysteine-serine-rich nuclear protein 1b
chr21_-_27273147 0.19 ENSDART00000143239
mark2a
MAP/microtubule affinity-regulating kinase 2a
chr18_-_5875433 0.19 ENSDART00000151727
nob1
NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
chr2_+_26179096 0.19 ENSDART00000024662
plppr3a
phospholipid phosphatase related 3a
chr23_+_21978816 0.19 ENSDART00000087110
eif4g3b
eukaryotic translation initiation factor 4 gamma, 3b
chr23_+_28077953 0.19 ENSDART00000186122
ENSDART00000111570
slc26a10
solute carrier family 26, member 10
chr23_+_21978584 0.18 ENSDART00000145172
eif4g3b
eukaryotic translation initiation factor 4 gamma, 3b
chr21_+_20386865 0.18 ENSDART00000144366
si:dkey-30k6.5
si:dkey-30k6.5
chr9_+_38163876 0.18 ENSDART00000137955
clasp1a
cytoplasmic linker associated protein 1a
chr21_+_19547806 0.18 ENSDART00000159707
ENSDART00000184869
ENSDART00000181321
ENSDART00000058487
ENSDART00000058485
rai14
retinoic acid induced 14
chr25_+_18954189 0.18 ENSDART00000123207
tdg.2
thymine DNA glycosylase, tandem duplicate 2
chr7_+_19851422 0.18 ENSDART00000142970
ENSDART00000190027
mus81
MUS81 structure-specific endonuclease subunit
chr16_-_41714988 0.18 ENSDART00000138798
cep85
centrosomal protein 85
chr17_+_44030692 0.18 ENSDART00000049503
peli2
pellino E3 ubiquitin protein ligase family member 2
chr16_-_30847192 0.17 ENSDART00000191106
ENSDART00000128158
ptk2ab
protein tyrosine kinase 2ab
chr10_+_31809226 0.17 ENSDART00000087898
foxo1b
forkhead box O1 b
chr2_+_19195841 0.17 ENSDART00000163137
ENSDART00000161095
elovl1a
ELOVL fatty acid elongase 1a
chr20_+_53368611 0.17 ENSDART00000060432
cdc40
cell division cycle 40 homolog (S. cerevisiae)
chr13_+_9368621 0.16 ENSDART00000109126
alms1
Alstrom syndrome protein 1
chr15_-_7337537 0.16 ENSDART00000161613
SLC7A1 (1 of many)
high affinity cationic amino acid transporter 1
chr23_+_25354856 0.16 ENSDART00000109023
ENSDART00000147440
fmnl3
formin-like 3
chr5_-_16351306 0.16 ENSDART00000168643
CABZ01088700.1

chr6_-_43792179 0.16 ENSDART00000160849
foxp1b
forkhead box P1b
chr23_-_45398622 0.16 ENSDART00000053571
ENSDART00000149464
zgc:100911
zgc:100911
chr1_+_35494837 0.16 ENSDART00000140724
gab1
GRB2-associated binding protein 1
chr5_+_53009083 0.16 ENSDART00000157836
hint2
histidine triad nucleotide binding protein 2
chr2_+_21000334 0.16 ENSDART00000062563
ENSDART00000147809
rreb1b
ras responsive element binding protein 1b
chr14_+_35424539 0.16 ENSDART00000171809
ENSDART00000162185
sytl4
synaptotagmin-like 4
chr15_-_4011013 0.16 ENSDART00000158029
CR626884.3

chr12_-_5998898 0.16 ENSDART00000142659
ENSDART00000004896
kat7b
K(lysine) acetyltransferase 7b
chr18_+_5875268 0.15 ENSDART00000177784
ENSDART00000122009
wdr59
WD repeat domain 59
chr9_+_9502610 0.15 ENSDART00000061525
ENSDART00000125174
nr1i2
nuclear receptor subfamily 1, group I, member 2
chr10_-_17222083 0.15 ENSDART00000134059
depdc5
DEP domain containing 5
chr16_+_28578648 0.15 ENSDART00000149566
nmt2
N-myristoyltransferase 2
chr24_-_31306724 0.15 ENSDART00000165399
acp5b
acid phosphatase 5b, tartrate resistant
chr16_+_38350704 0.15 ENSDART00000140761
elp6
elongator acetyltransferase complex subunit 6
chr1_+_51191049 0.15 ENSDART00000132244
ENSDART00000014970
ENSDART00000132141
btbd3a
BTB (POZ) domain containing 3a
chr2_-_26720854 0.15 ENSDART00000148110
si:dkey-181m9.8
si:dkey-181m9.8
chr11_-_21586157 0.15 ENSDART00000190095
srgap2
SLIT-ROBO Rho GTPase activating protein 2
chr22_+_24446964 0.15 ENSDART00000166812
p3h2
prolyl 3-hydroxylase 2
chr2_-_23677422 0.15 ENSDART00000079131
cdyl
chromodomain protein, Y-like
chr7_-_51102479 0.15 ENSDART00000174023
col4a6
collagen, type IV, alpha 6
chr2_+_38373272 0.15 ENSDART00000113111
psmb5
proteasome subunit beta 5
chr10_-_17221725 0.14 ENSDART00000111088
depdc5
DEP domain containing 5
chr16_-_49646625 0.14 ENSDART00000101629
efhb
EF-hand domain family, member B
chr24_-_37640705 0.14 ENSDART00000066583
zgc:112496
zgc:112496
chr21_-_26028205 0.14 ENSDART00000034875
sdf2
stromal cell-derived factor 2
chr23_-_27608257 0.14 ENSDART00000026314
phf8
PHD finger protein 8
chr23_+_31596194 0.14 ENSDART00000160748
tbpl1
TBP-like 1
chr17_-_27273296 0.14 ENSDART00000077087
id3
inhibitor of DNA binding 3
chr23_-_43424510 0.13 ENSDART00000055564
rprd1b
regulation of nuclear pre-mRNA domain containing 1B
chr25_-_25142387 0.13 ENSDART00000031814
tsg101a
tumor susceptibility 101a
chr15_-_37589600 0.13 ENSDART00000154641
proser3
proline and serine rich 3
chr2_+_49572059 0.13 ENSDART00000108861
sema4e
semaphorin 4e
chr5_+_28271412 0.13 ENSDART00000031727
vamp8
vesicle-associated membrane protein 8 (endobrevin)
chr9_+_50600355 0.13 ENSDART00000187567
fign
fidgetin
chr13_+_29926094 0.12 ENSDART00000057528
cuedc2
CUE domain containing 2
chr10_-_14929630 0.12 ENSDART00000121892
ENSDART00000044756
ENSDART00000128579
ENSDART00000147653
smad2
SMAD family member 2

Network of associatons between targets according to the STRING database.

First level regulatory network of foxk1_foxj3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.1 GO:0016123 tetraterpenoid metabolic process(GO:0016108) tetraterpenoid biosynthetic process(GO:0016109) carotenoid metabolic process(GO:0016116) carotenoid biosynthetic process(GO:0016117) xanthophyll metabolic process(GO:0016122) xanthophyll biosynthetic process(GO:0016123) zeaxanthin metabolic process(GO:1901825) zeaxanthin biosynthetic process(GO:1901827)
0.2 0.5 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.1 0.5 GO:0018377 N-terminal protein myristoylation(GO:0006499) N-terminal peptidyl-glycine N-myristoylation(GO:0018008) protein myristoylation(GO:0018377)
0.1 1.0 GO:0032889 regulation of vacuole fusion, non-autophagic(GO:0032889)
0.1 0.8 GO:1902292 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.1 0.3 GO:0010312 detoxification of zinc ion(GO:0010312) stress response to zinc ion(GO:1990359)
0.1 0.6 GO:0006004 fucose metabolic process(GO:0006004)
0.1 0.8 GO:0097345 mitochondrial outer membrane permeabilization(GO:0097345)
0.1 1.1 GO:1904263 positive regulation of TORC1 signaling(GO:1904263)
0.1 0.3 GO:0051026 chiasma assembly(GO:0051026)
0.1 0.2 GO:0090131 mesenchyme migration(GO:0090131)
0.1 0.3 GO:1904182 regulation of pyruvate dehydrogenase activity(GO:1904182) positive regulation of pyruvate dehydrogenase activity(GO:1904184)
0.1 0.3 GO:0098908 regulation of neuronal action potential(GO:0098908)
0.1 0.8 GO:0006611 protein export from nucleus(GO:0006611)
0.1 0.5 GO:1901741 positive regulation of myoblast fusion(GO:1901741)
0.1 0.3 GO:2000001 regulation of DNA damage checkpoint(GO:2000001)
0.1 1.0 GO:0046686 response to cadmium ion(GO:0046686)
0.1 0.5 GO:0007080 mitotic metaphase plate congression(GO:0007080)
0.0 0.1 GO:0061187 regulation of chromatin silencing at rDNA(GO:0061187) negative regulation of chromatin silencing at rDNA(GO:0061188)
0.0 0.9 GO:0006658 phosphatidylserine metabolic process(GO:0006658)
0.0 0.4 GO:0007084 mitotic nuclear envelope reassembly(GO:0007084)
0.0 0.2 GO:0046607 positive regulation of centrosome cycle(GO:0046607)
0.0 0.5 GO:0006285 base-excision repair, AP site formation(GO:0006285)
0.0 0.3 GO:0055011 atrial cardiac muscle cell differentiation(GO:0055011)
0.0 0.3 GO:0021910 smoothened signaling pathway involved in ventral spinal cord patterning(GO:0021910) regulation of myotome development(GO:2000290)
0.0 0.3 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.0 0.1 GO:0034773 histone H4-K20 methylation(GO:0034770) histone H4-K20 trimethylation(GO:0034773) regulation of isotype switching(GO:0045191) positive regulation of isotype switching(GO:0045830)
0.0 0.5 GO:0060236 regulation of mitotic spindle organization(GO:0060236)
0.0 0.4 GO:0032196 transposition(GO:0032196)
0.0 0.7 GO:0008078 mesodermal cell migration(GO:0008078)
0.0 0.2 GO:0008592 regulation of Toll signaling pathway(GO:0008592)
0.0 0.1 GO:0071896 protein localization to adherens junction(GO:0071896)
0.0 0.2 GO:0044342 type B pancreatic cell proliferation(GO:0044342)
0.0 0.4 GO:0045162 clustering of voltage-gated sodium channels(GO:0045162)
0.0 0.1 GO:2001223 negative regulation of neuron migration(GO:2001223)
0.0 0.3 GO:0071850 mitotic cell cycle arrest(GO:0071850)
0.0 0.9 GO:0036342 post-anal tail morphogenesis(GO:0036342)
0.0 0.7 GO:0034472 snRNA 3'-end processing(GO:0034472)
0.0 0.1 GO:1901407 regulation of phosphorylation of RNA polymerase II C-terminal domain(GO:1901407)
0.0 0.2 GO:0000727 double-strand break repair via break-induced replication(GO:0000727)
0.0 0.1 GO:0010692 regulation of alkaline phosphatase activity(GO:0010692) negative regulation of alkaline phosphatase activity(GO:0010693)
0.0 0.1 GO:0038063 collagen-activated tyrosine kinase receptor signaling pathway(GO:0038063) collagen-activated signaling pathway(GO:0038065)
0.0 0.2 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0 0.1 GO:2000583 regulation of platelet-derived growth factor receptor signaling pathway(GO:0010640) platelet-derived growth factor receptor-alpha signaling pathway(GO:0035790) regulation of platelet-derived growth factor receptor-alpha signaling pathway(GO:2000583)
0.0 0.3 GO:0035269 protein O-linked mannosylation(GO:0035269)
0.0 0.1 GO:0036314 response to sterol(GO:0036314) cellular response to sterol(GO:0036315) SREBP-SCAP complex retention in endoplasmic reticulum(GO:0036316) regulation of SREBP signaling pathway(GO:2000638) negative regulation of SREBP signaling pathway(GO:2000639)
0.0 0.1 GO:0070254 mucus secretion(GO:0070254)
0.0 0.5 GO:0006829 zinc II ion transport(GO:0006829)
0.0 0.2 GO:0070309 lens fiber cell development(GO:0070307) lens fiber cell morphogenesis(GO:0070309)
0.0 0.4 GO:0044872 lipoprotein transport(GO:0042953) lipoprotein localization(GO:0044872)
0.0 0.3 GO:0032008 positive regulation of TOR signaling(GO:0032008)
0.0 0.2 GO:0030311 poly-N-acetyllactosamine metabolic process(GO:0030309) poly-N-acetyllactosamine biosynthetic process(GO:0030311)
0.0 0.1 GO:0045453 bone resorption(GO:0045453)
0.0 0.3 GO:0048026 positive regulation of mRNA splicing, via spliceosome(GO:0048026)
0.0 0.3 GO:0008156 negative regulation of DNA replication(GO:0008156)
0.0 0.6 GO:0043966 histone H3 acetylation(GO:0043966)
0.0 0.4 GO:0007634 optokinetic behavior(GO:0007634)
0.0 0.1 GO:0021534 cell proliferation in hindbrain(GO:0021534)
0.0 0.2 GO:0035108 limb morphogenesis(GO:0035108)
0.0 0.1 GO:1990108 protein linear deubiquitination(GO:1990108)
0.0 0.3 GO:0043507 activation of JUN kinase activity(GO:0007257) positive regulation of JUN kinase activity(GO:0043507)
0.0 0.1 GO:0060251 regulation of glial cell proliferation(GO:0060251)
0.0 0.3 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.0 0.1 GO:0061056 sclerotome development(GO:0061056)
0.0 0.2 GO:0045824 negative regulation of toll-like receptor signaling pathway(GO:0034122) negative regulation of innate immune response(GO:0045824)
0.0 0.1 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.0 0.1 GO:0016074 snoRNA metabolic process(GO:0016074)
0.0 0.3 GO:0032392 DNA geometric change(GO:0032392) DNA duplex unwinding(GO:0032508)
0.0 0.1 GO:0006621 protein retention in ER lumen(GO:0006621)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 GO:0000811 GINS complex(GO:0000811)
0.1 0.6 GO:0097134 cyclin E1-CDK2 complex(GO:0097134)
0.1 1.0 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.1 0.5 GO:0005880 nuclear microtubule(GO:0005880)
0.1 0.4 GO:0034515 proteasome storage granule(GO:0034515)
0.1 0.6 GO:0005663 DNA replication factor C complex(GO:0005663)
0.1 0.2 GO:0031213 RSF complex(GO:0031213)
0.1 0.6 GO:0005671 Ada2/Gcn5/Ada3 transcription activator complex(GO:0005671)
0.1 0.2 GO:0005828 kinetochore microtubule(GO:0005828)
0.0 0.5 GO:0001669 acrosomal vesicle(GO:0001669)
0.0 0.2 GO:0033186 CAF-1 complex(GO:0033186)
0.0 0.4 GO:0000796 condensin complex(GO:0000796)
0.0 0.3 GO:1990130 Iml1 complex(GO:1990130)
0.0 0.5 GO:0035098 ESC/E(Z) complex(GO:0035098)
0.0 0.5 GO:0071564 npBAF complex(GO:0071564)
0.0 0.7 GO:0032039 integrator complex(GO:0032039)
0.0 0.5 GO:0000940 condensed chromosome outer kinetochore(GO:0000940)
0.0 0.6 GO:0042555 MCM complex(GO:0042555)
0.0 0.4 GO:0071782 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.0 0.2 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 0.6 GO:0045180 basal cortex(GO:0045180)
0.0 0.1 GO:0010369 chromocenter(GO:0010369)
0.0 0.3 GO:0034451 centriolar satellite(GO:0034451)
0.0 0.2 GO:0042612 MHC class I protein complex(GO:0042612)
0.0 0.1 GO:0070209 ASTRA complex(GO:0070209)
0.0 0.3 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.1 GO:0098645 collagen type IV trimer(GO:0005587) network-forming collagen trimer(GO:0098642) collagen network(GO:0098645) basement membrane collagen trimer(GO:0098651)
0.0 0.4 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.1 GO:0032937 SREBP-SCAP-Insig complex(GO:0032937)
0.0 0.4 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.1 GO:0048269 methionine adenosyltransferase complex(GO:0048269)
0.0 0.4 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.2 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 0.1 GO:0071797 LUBAC complex(GO:0071797)
0.0 0.3 GO:0070822 Sin3-type complex(GO:0070822)
0.0 0.2 GO:0005869 dynactin complex(GO:0005869)
0.0 0.1 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 0.9 GO:0072686 mitotic spindle(GO:0072686)
0.0 0.9 GO:0005643 nuclear pore(GO:0005643)
0.0 0.6 GO:0005637 nuclear inner membrane(GO:0005637)
0.0 0.6 GO:0005762 organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.0 GO:0043218 compact myelin(GO:0043218) Schmidt-Lanterman incisure(GO:0043220)
0.0 0.0 GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
0.0 0.1 GO:0031526 brush border membrane(GO:0031526)
0.0 0.8 GO:0005814 centriole(GO:0005814)
0.0 0.2 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.0 1.3 GO:0005765 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0004736 pyruvate carboxylase activity(GO:0004736)
0.3 1.1 GO:0052885 retinol isomerase activity(GO:0050251) all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity(GO:0052885)
0.2 0.7 GO:0051059 NF-kappaB binding(GO:0051059)
0.1 0.5 GO:0004379 glycylpeptide N-tetradecanoyltransferase activity(GO:0004379)
0.1 1.0 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.1 0.3 GO:0004741 [pyruvate dehydrogenase (lipoamide)] phosphatase activity(GO:0004741)
0.1 0.8 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.1 0.4 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.1 0.6 GO:0043515 kinetochore binding(GO:0043515)
0.1 0.6 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 0.2 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 0.5 GO:0034647 histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 0.3 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.1 0.5 GO:0008263 mismatch base pair DNA N-glycosylase activity(GO:0000700) pyrimidine-specific mismatch base pair DNA N-glycosylase activity(GO:0008263)
0.0 0.4 GO:0016922 ligand-dependent nuclear receptor binding(GO:0016922)
0.0 0.3 GO:0015616 DNA translocase activity(GO:0015616)
0.0 0.2 GO:0050998 nitric-oxide synthase binding(GO:0050998)
0.0 0.1 GO:0042799 histone methyltransferase activity (H4-K20 specific)(GO:0042799)
0.0 0.1 GO:0031544 procollagen-proline 3-dioxygenase activity(GO:0019797) peptidyl-proline 3-dioxygenase activity(GO:0031544)
0.0 0.6 GO:0008417 fucosyltransferase activity(GO:0008417)
0.0 0.1 GO:0035575 histone demethylase activity (H4-K20 specific)(GO:0035575)
0.0 0.3 GO:0004706 JUN kinase kinase kinase activity(GO:0004706)
0.0 0.6 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.0 0.9 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.1 GO:0050253 retinyl-palmitate esterase activity(GO:0050253)
0.0 0.1 GO:0033857 inositol heptakisphosphate kinase activity(GO:0000829) diphosphoinositol-pentakisphosphate kinase activity(GO:0033857)
0.0 0.2 GO:0048156 tau protein binding(GO:0048156)
0.0 0.1 GO:1990174 phosphodiesterase decapping endonuclease activity(GO:1990174)
0.0 0.4 GO:0008449 N-acetylglucosamine-6-sulfatase activity(GO:0008449)
0.0 0.4 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.0 0.2 GO:0045294 alpha-catenin binding(GO:0045294)
0.0 0.5 GO:0031267 small GTPase binding(GO:0031267)
0.0 0.3 GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity(GO:0004169)
0.0 0.1 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 0.1 GO:0008349 MAP kinase kinase kinase kinase activity(GO:0008349)
0.0 0.1 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.0 0.4 GO:0050321 tau-protein kinase activity(GO:0050321)
0.0 0.1 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 0.2 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 0.2 GO:0008532 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity(GO:0008532)
0.0 0.3 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.0 0.3 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.8 GO:0004402 histone acetyltransferase activity(GO:0004402)
0.0 0.2 GO:0000030 mannosyltransferase activity(GO:0000030)
0.0 0.3 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.2 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.0 GO:0045545 syndecan binding(GO:0045545)
0.0 0.3 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 0.8 GO:0003678 DNA helicase activity(GO:0003678)
0.0 0.1 GO:0016941 natriuretic peptide receptor activity(GO:0016941)
0.0 0.0 GO:0003839 gamma-glutamylcyclotransferase activity(GO:0003839)
0.0 0.3 GO:0000339 RNA cap binding(GO:0000339)
0.0 0.1 GO:0008142 oxysterol binding(GO:0008142)
0.0 1.6 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.2 GO:0035615 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.8 SA REG CASCADE OF CYCLIN EXPR Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases.
0.0 0.4 PID ERB GENOMIC PATHWAY Validated nuclear estrogen receptor beta network
0.0 0.4 PID IL5 PATHWAY IL5-mediated signaling events
0.0 0.5 PID AURORA A PATHWAY Aurora A signaling
0.0 0.9 PID ATR PATHWAY ATR signaling pathway
0.0 0.2 PID RET PATHWAY Signaling events regulated by Ret tyrosine kinase

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.5 REACTOME ZINC TRANSPORTERS Genes involved in Zinc transporters
0.0 0.4 REACTOME MEMBRANE BINDING AND TARGETTING OF GAG PROTEINS Genes involved in Membrane binding and targetting of GAG proteins
0.0 0.6 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.0 0.2 REACTOME ENDOSOMAL VACUOLAR PATHWAY Genes involved in Endosomal/Vacuolar pathway
0.0 0.8 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.0 0.3 REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX Genes involved in Regulation of pyruvate dehydrogenase (PDH) complex
0.0 0.2 REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX Genes involved in CDC6 association with the ORC:origin complex
0.0 0.4 REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA Genes involved in Circadian Repression of Expression by REV-ERBA
0.0 0.2 REACTOME IRAK1 RECRUITS IKK COMPLEX Genes involved in IRAK1 recruits IKK complex
0.0 0.4 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.0 0.5 REACTOME CDK MEDIATED PHOSPHORYLATION AND REMOVAL OF CDC6 Genes involved in CDK-mediated phosphorylation and removal of Cdc6