PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
grhl1 | dr11_v1_chr17_-_32426392_32426413 | -0.22 | 3.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_-_13541514 Show fit | 4.16 |
ENSDART00000063834
|
zgc:86586 |
|
chr4_-_9780931 Show fit | 4.02 |
ENSDART00000134280
ENSDART00000150664 ENSDART00000150304 ENSDART00000080744 |
SVOP-like |
|
chr1_+_49352900 Show fit | 3.67 |
ENSDART00000008468
|
muscle segment homeobox 1b |
|
chr11_+_6116503 Show fit | 3.29 |
ENSDART00000176170
|
nuclear receptor subfamily 2, group F, member 6b |
|
chr13_+_18533005 Show fit | 3.29 |
ENSDART00000136024
|
finTRIM family, member 14-like |
|
chr14_+_46216703 Show fit | 3.20 |
ENSDART00000136045
ENSDART00000142317 |
microsomal glutathione S-transferase 2 |
|
chr3_-_29977495 Show fit | 3.06 |
ENSDART00000077111
|
hydroxysteroid (17-beta) dehydrogenase 14 |
|
chr1_-_52498146 Show fit | 2.66 |
ENSDART00000122217
|
aspartoacylase (aminocyclase) 3, tandem duplicate 2 |
|
chr16_+_7154753 Show fit | 2.62 |
ENSDART00000163281
ENSDART00000168274 |
BMP binding endothelial regulator |
|
chr15_-_5901514 Show fit | 2.60 |
ENSDART00000155252
|
si:ch73-281n10.2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 6.3 | GO:0043049 | otic placode formation(GO:0043049) |
1.1 | 4.6 | GO:0019532 | oxalate transport(GO:0019532) |
0.6 | 3.2 | GO:0019370 | leukotriene metabolic process(GO:0006691) leukotriene biosynthetic process(GO:0019370) |
0.0 | 3.2 | GO:0000122 | negative regulation of transcription from RNA polymerase II promoter(GO:0000122) |
0.1 | 2.5 | GO:0018230 | peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231) |
0.0 | 2.5 | GO:0009913 | epidermal cell differentiation(GO:0009913) |
0.8 | 2.4 | GO:0006043 | glucosamine metabolic process(GO:0006041) glucosamine catabolic process(GO:0006043) |
0.1 | 2.2 | GO:0030322 | stabilization of membrane potential(GO:0030322) |
0.0 | 2.1 | GO:0046890 | regulation of lipid biosynthetic process(GO:0046890) |
0.2 | 1.8 | GO:0021553 | olfactory nerve development(GO:0021553) olfactory nerve morphogenesis(GO:0021627) olfactory nerve formation(GO:0021628) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.4 | GO:0016324 | apical plasma membrane(GO:0016324) |
0.0 | 3.2 | GO:0005635 | nuclear envelope(GO:0005635) |
0.1 | 2.2 | GO:0043204 | perikaryon(GO:0043204) |
0.2 | 1.8 | GO:0031588 | nucleotide-activated protein kinase complex(GO:0031588) |
0.1 | 1.8 | GO:1990023 | mitotic spindle midzone(GO:1990023) |
0.0 | 1.8 | GO:0048475 | membrane coat(GO:0030117) coated membrane(GO:0048475) |
0.0 | 1.7 | GO:0072686 | mitotic spindle(GO:0072686) |
0.0 | 1.5 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.0 | 1.4 | GO:0005882 | intermediate filament(GO:0005882) |
0.1 | 1.2 | GO:0031680 | G-protein beta/gamma-subunit complex(GO:0031680) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.6 | GO:0019531 | oxalate transmembrane transporter activity(GO:0019531) |
0.4 | 4.4 | GO:0004046 | aminoacylase activity(GO:0004046) |
0.0 | 3.3 | GO:0004879 | RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding(GO:0004879) |
0.8 | 3.2 | GO:0004464 | leukotriene-C4 synthase activity(GO:0004464) |
0.1 | 2.6 | GO:0031492 | nucleosomal DNA binding(GO:0031492) |
0.1 | 2.6 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.1 | 2.5 | GO:0019707 | protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707) |
0.8 | 2.4 | GO:0004342 | glucosamine-6-phosphate deaminase activity(GO:0004342) |
0.1 | 2.2 | GO:0015271 | outward rectifier potassium channel activity(GO:0015271) |
0.1 | 1.8 | GO:0016208 | AMP binding(GO:0016208) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.6 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 1.7 | PID CMYB PATHWAY | C-MYB transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.2 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 1.7 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.0 | 1.0 | REACTOME CYTOSOLIC TRNA AMINOACYLATION | Genes involved in Cytosolic tRNA aminoacylation |
0.0 | 0.6 | REACTOME SYNTHESIS OF GLYCOSYLPHOSPHATIDYLINOSITOL GPI | Genes involved in Synthesis of glycosylphosphatidylinositol (GPI) |