PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
hbp1 | dr11_v1_chr25_-_3469576_3469576 | 0.41 | 7.8e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr18_+_13792490 Show fit | 2.59 |
ENSDART00000136754
|
cadherin 13, H-cadherin (heart) |
|
chr24_-_6898302 Show fit | 1.99 |
ENSDART00000158646
|
dipeptidyl-peptidase 6a |
|
chr15_+_45643787 Show fit | 1.60 |
ENSDART00000055995
ENSDART00000157750 |
S-antigen; retina and pineal gland (arrestin) b |
|
chr12_-_11457625 Show fit | 1.47 |
ENSDART00000012318
|
HtrA serine peptidase 1b |
|
chr23_+_10352921 Show fit | 1.21 |
ENSDART00000081193
|
si:ch211-133j6.3 |
|
chr1_-_59252973 Show fit | 1.13 |
ENSDART00000167061
|
si:ch1073-286c18.5 |
|
chr1_-_14258409 Show fit | 1.00 |
ENSDART00000079359
|
phosphodiesterase 5A, cGMP-specific, a |
|
chr7_-_66868543 Show fit | 0.94 |
ENSDART00000149680
|
adenosine monophosphate deaminase 3a |
|
chr14_+_6159162 Show fit | 0.93 |
ENSDART00000128638
|
Bernardinelli-Seip congenital lipodystrophy 2, like |
|
chr25_+_7229046 Show fit | 0.92 |
ENSDART00000149965
ENSDART00000041820 |
leucine rich repeat and Ig domain containing 1a |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 2.6 | GO:1902262 | apoptotic process involved in patterning of blood vessels(GO:1902262) |
0.1 | 2.0 | GO:1901379 | regulation of potassium ion transmembrane transport(GO:1901379) |
0.2 | 1.6 | GO:0034389 | lipid particle organization(GO:0034389) |
0.1 | 1.6 | GO:0002031 | G-protein coupled receptor internalization(GO:0002031) |
0.1 | 0.9 | GO:0032264 | IMP salvage(GO:0032264) |
0.0 | 0.9 | GO:0031103 | axon regeneration(GO:0031103) |
0.0 | 0.8 | GO:0007173 | epidermal growth factor receptor signaling pathway(GO:0007173) |
0.0 | 0.8 | GO:0071277 | cellular response to calcium ion(GO:0071277) |
0.2 | 0.7 | GO:1905072 | cardiac jelly development(GO:1905072) |
0.1 | 0.7 | GO:0050688 | regulation of defense response to virus(GO:0050688) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.6 | GO:0016342 | catenin complex(GO:0016342) |
0.0 | 2.0 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) potassium channel complex(GO:0034705) |
0.1 | 1.6 | GO:0001917 | photoreceptor inner segment(GO:0001917) |
0.0 | 0.7 | GO:0032281 | AMPA glutamate receptor complex(GO:0032281) |
0.0 | 0.5 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.1 | 0.4 | GO:1902560 | GMP reductase complex(GO:1902560) |
0.1 | 0.4 | GO:0038039 | G-protein coupled receptor dimeric complex(GO:0038037) G-protein coupled receptor heterodimeric complex(GO:0038039) G-protein coupled receptor complex(GO:0097648) |
0.0 | 0.4 | GO:0005605 | basal lamina(GO:0005605) laminin complex(GO:0043256) |
0.1 | 0.3 | GO:0072380 | TRC complex(GO:0072380) |
0.1 | 0.3 | GO:0034663 | endoplasmic reticulum chaperone complex(GO:0034663) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.6 | GO:0045296 | cadherin binding(GO:0045296) |
0.1 | 2.0 | GO:0008239 | dipeptidyl-peptidase activity(GO:0008239) |
0.1 | 1.5 | GO:0005520 | insulin-like growth factor binding(GO:0005520) |
0.0 | 1.5 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.0 | 1.1 | GO:0005154 | epidermal growth factor receptor binding(GO:0005154) |
0.1 | 1.0 | GO:0047555 | 3',5'-cyclic-GMP phosphodiesterase activity(GO:0047555) |
0.1 | 0.9 | GO:0003876 | AMP deaminase activity(GO:0003876) adenosine-phosphate deaminase activity(GO:0047623) |
0.3 | 0.8 | GO:0005006 | epidermal growth factor-activated receptor activity(GO:0005006) |
0.1 | 0.6 | GO:0004392 | heme oxygenase (decyclizing) activity(GO:0004392) |
0.1 | 0.5 | GO:0042030 | ATPase inhibitor activity(GO:0042030) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.7 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.0 | 0.5 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.6 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 0.7 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |
0.0 | 0.5 | REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS | Genes involved in Association of TriC/CCT with target proteins during biosynthesis |
0.0 | 0.4 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.0 | 0.3 | REACTOME ACTIVATION OF CHAPERONE GENES BY ATF6 ALPHA | Genes involved in Activation of Chaperone Genes by ATF6-alpha |
0.0 | 0.3 | REACTOME CHONDROITIN SULFATE BIOSYNTHESIS | Genes involved in Chondroitin sulfate biosynthesis |
0.0 | 0.3 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.0 | 0.1 | REACTOME HDL MEDIATED LIPID TRANSPORT | Genes involved in HDL-mediated lipid transport |