PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
hdx | dr11_v1_chr14_-_6225336_6225336 | -0.15 | 5.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_34696503 Show fit | 0.53 |
ENSDART00000186106
|
|
|
chr5_-_30620625 Show fit | 0.52 |
ENSDART00000098273
|
transcobalamin like |
|
chr22_-_278328 Show fit | 0.50 |
ENSDART00000098072
|
myosin, heavy polypeptide 1.1, skeletal muscle |
|
chr22_-_4778018 Show fit | 0.46 |
ENSDART00000143968
|
si:ch73-256j6.5 |
|
chr25_+_29160102 Show fit | 0.44 |
ENSDART00000162854
|
pyruvate kinase M1/2b |
|
chr3_+_25154078 Show fit | 0.40 |
ENSDART00000156973
|
si:ch211-256m1.8 |
|
chr19_-_12324514 Show fit | 0.39 |
ENSDART00000122192
|
neurocalcin delta b |
|
chr19_-_20270178 Show fit | 0.38 |
ENSDART00000144891
ENSDART00000090883 |
glycoprotein (transmembrane) nmb |
|
chr11_-_29737088 Show fit | 0.36 |
ENSDART00000159828
|
si:ch211-218g23.6 |
|
chr23_-_4915118 Show fit | 0.35 |
ENSDART00000060714
|
ATPase H+ transporting accessory protein 1a |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | GO:0001757 | somite specification(GO:0001757) |
0.0 | 0.4 | GO:0016540 | protein autoprocessing(GO:0016540) |
0.1 | 0.3 | GO:0006565 | L-serine catabolic process(GO:0006565) |
0.1 | 0.3 | GO:0015867 | intracellular nucleoside transport(GO:0015859) purine nucleoside transmembrane transport(GO:0015860) purine nucleotide transport(GO:0015865) ATP transport(GO:0015867) purine ribonucleotide transport(GO:0015868) adenine nucleotide transport(GO:0051503) mitochondrial ATP transmembrane transport(GO:1990544) |
0.0 | 0.3 | GO:0036444 | calcium ion transmembrane import into mitochondrion(GO:0036444) |
0.0 | 0.3 | GO:0098943 | neurotransmitter receptor transport, postsynaptic endosome to lysosome(GO:0098943) |
0.1 | 0.2 | GO:0071634 | regulation of natural killer cell activation(GO:0032814) positive regulation of natural killer cell activation(GO:0032816) regulation of transforming growth factor beta production(GO:0071634) negative regulation of transforming growth factor beta production(GO:0071635) |
0.0 | 0.2 | GO:1903232 | melanosome assembly(GO:1903232) |
0.0 | 0.2 | GO:1902547 | regulation of vascular endothelial growth factor signaling pathway(GO:1900746) regulation of cellular response to vascular endothelial growth factor stimulus(GO:1902547) |
0.0 | 0.2 | GO:0046323 | glucose import(GO:0046323) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.4 | GO:0033181 | plasma membrane proton-transporting V-type ATPase complex(GO:0033181) |
0.0 | 0.3 | GO:1990246 | uniplex complex(GO:1990246) |
0.0 | 0.2 | GO:0031085 | BLOC-3 complex(GO:0031085) |
0.0 | 0.2 | GO:0005751 | mitochondrial respiratory chain complex IV(GO:0005751) |
0.0 | 0.2 | GO:0017146 | NMDA selective glutamate receptor complex(GO:0017146) |
0.0 | 0.1 | GO:0044316 | cone cell pedicle(GO:0044316) |
0.0 | 0.1 | GO:0009331 | glycerol-3-phosphate dehydrogenase complex(GO:0009331) |
0.0 | 0.1 | GO:0005742 | mitochondrial outer membrane translocase complex(GO:0005742) |
0.0 | 0.0 | GO:0005592 | collagen type XI trimer(GO:0005592) |
0.0 | 0.0 | GO:1904423 | dehydrodolichyl diphosphate synthase complex(GO:1904423) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.4 | GO:0008798 | beta-aspartyl-peptidase activity(GO:0008798) |
0.1 | 0.4 | GO:0004743 | pyruvate kinase activity(GO:0004743) |
0.1 | 0.3 | GO:0005471 | ATP:ADP antiporter activity(GO:0005471) |
0.1 | 0.3 | GO:0016841 | ammonia-lyase activity(GO:0016841) |
0.1 | 0.2 | GO:0008169 | C-methyltransferase activity(GO:0008169) |
0.0 | 0.2 | GO:0031013 | troponin C binding(GO:0030172) troponin I binding(GO:0031013) |
0.0 | 0.2 | GO:0052650 | NADP-retinol dehydrogenase activity(GO:0052650) |
0.0 | 0.2 | GO:0042813 | Wnt-activated receptor activity(GO:0042813) |
0.0 | 0.2 | GO:0005504 | fatty acid binding(GO:0005504) |
0.0 | 0.1 | GO:0016206 | catechol O-methyltransferase activity(GO:0016206) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.2 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.2 | REACTOME UNBLOCKING OF NMDA RECEPTOR GLUTAMATE BINDING AND ACTIVATION | Genes involved in Unblocking of NMDA receptor, glutamate binding and activation |
0.0 | 0.2 | REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS | Genes involved in Facilitative Na+-independent glucose transporters |
0.0 | 0.2 | REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS | Genes involved in Signal regulatory protein (SIRP) family interactions |
0.0 | 0.2 | REACTOME RNA POL I PROMOTER OPENING | Genes involved in RNA Polymerase I Promoter Opening |
0.0 | 0.1 | REACTOME RAP1 SIGNALLING | Genes involved in Rap1 signalling |