PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
hic1l | dr11_v1_chr25_-_25575241_25575241 | -0.74 | 3.2e-04 | Click! |
hic2 | dr11_v1_chr10_+_3145707_3145707 | -0.71 | 7.3e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_+_6159162 Show fit | 1.49 |
ENSDART00000128638
|
Bernardinelli-Seip congenital lipodystrophy 2, like |
|
chr1_-_55810730 Show fit | 1.27 |
ENSDART00000100551
|
zgc:136908 |
|
chr5_+_32815745 Show fit | 1.03 |
ENSDART00000181535
|
carnitine O-acetyltransferase a |
|
chr25_+_31222069 Show fit | 1.02 |
ENSDART00000159373
|
troponin I type 2a (skeletal, fast), tandem duplicate 1 |
|
chr12_+_28367557 Show fit | 1.02 |
ENSDART00000066294
|
cyclin-dependent kinase 5, regulatory subunit 1b (p35) |
|
chr18_-_16123222 Show fit | 1.02 |
ENSDART00000061189
|
sarcospan (Kras oncogene-associated gene) |
|
chr17_-_19344999 Show fit | 1.01 |
ENSDART00000138315
|
goosecoid |
|
chr5_-_57641257 Show fit | 0.99 |
ENSDART00000149282
|
heat shock protein, alpha-crystallin-related, b2 |
|
chr5_+_15992655 Show fit | 0.92 |
ENSDART00000182148
|
zinc and ring finger 3 |
|
chr21_+_5169154 Show fit | 0.88 |
ENSDART00000102559
|
zgc:122979 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.5 | GO:0034389 | lipid particle organization(GO:0034389) |
0.0 | 1.5 | GO:0061515 | myeloid cell development(GO:0061515) |
0.4 | 1.3 | GO:0051230 | mitotic spindle disassembly(GO:0051228) spindle disassembly(GO:0051230) |
0.2 | 1.0 | GO:0019254 | carnitine metabolic process, CoA-linked(GO:0019254) |
0.2 | 1.0 | GO:0035881 | amacrine cell differentiation(GO:0035881) |
0.0 | 1.0 | GO:0003009 | skeletal muscle contraction(GO:0003009) |
0.2 | 0.9 | GO:0032801 | receptor catabolic process(GO:0032801) |
0.0 | 0.9 | GO:0051085 | chaperone mediated protein folding requiring cofactor(GO:0051085) |
0.2 | 0.8 | GO:0035630 | bone mineralization involved in bone maturation(GO:0035630) |
0.0 | 0.8 | GO:1902476 | chloride transmembrane transport(GO:1902476) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.3 | 1.7 | GO:0016533 | cyclin-dependent protein kinase 5 holoenzyme complex(GO:0016533) |
0.0 | 1.7 | GO:0005861 | troponin complex(GO:0005861) |
0.0 | 1.5 | GO:0005884 | actin filament(GO:0005884) |
0.3 | 1.3 | GO:0034098 | VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098) |
0.0 | 1.3 | GO:0034707 | chloride channel complex(GO:0034707) |
0.1 | 1.0 | GO:0016010 | dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665) |
0.1 | 0.9 | GO:0016012 | sarcoglycan complex(GO:0016012) |
0.0 | 0.7 | GO:0005801 | cis-Golgi network(GO:0005801) |
0.0 | 0.7 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.7 | GO:0061575 | cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575) |
0.0 | 1.5 | GO:0042803 | protein homodimerization activity(GO:0042803) |
0.0 | 1.3 | GO:0031593 | polyubiquitin binding(GO:0031593) |
0.3 | 1.0 | GO:0004092 | carnitine O-acetyltransferase activity(GO:0004092) |
0.0 | 1.0 | GO:0042562 | hormone binding(GO:0042562) |
0.0 | 0.8 | GO:0044325 | ion channel binding(GO:0044325) |
0.1 | 0.7 | GO:0015250 | water channel activity(GO:0015250) |
0.0 | 0.7 | GO:0005523 | tropomyosin binding(GO:0005523) |
0.0 | 0.7 | GO:0051087 | chaperone binding(GO:0051087) |
0.1 | 0.6 | GO:0016933 | extracellular-glycine-gated ion channel activity(GO:0016933) extracellular-glycine-gated chloride channel activity(GO:0016934) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.7 | PID AR NONGENOMIC PATHWAY | Nongenotropic Androgen signaling |
0.0 | 0.3 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 0.2 | PID ALK2 PATHWAY | ALK2 signaling events |
0.0 | 0.2 | PID IL27 PATHWAY | IL27-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.7 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 0.6 | REACTOME LIGAND GATED ION CHANNEL TRANSPORT | Genes involved in Ligand-gated ion channel transport |
0.0 | 0.3 | REACTOME SIGNALING BY ACTIVATED POINT MUTANTS OF FGFR1 | Genes involved in Signaling by activated point mutants of FGFR1 |
0.0 | 0.3 | REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX | Genes involved in Regulation of pyruvate dehydrogenase (PDH) complex |
0.0 | 0.2 | REACTOME CREATION OF C4 AND C2 ACTIVATORS | Genes involved in Creation of C4 and C2 activators |
0.0 | 0.2 | REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF RAS | Genes involved in CREB phosphorylation through the activation of Ras |
0.0 | 0.1 | REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS | Genes involved in Tandem pore domain potassium channels |