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PRJEB1986: zebrafish developmental stages transcriptome
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Results for hlx1
Z-value: 0.23
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Transcription factors associated with hlx1
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
hlx1
|
ENSDARG00000009134 | H2.0-like homeo box 1 (Drosophila) |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| hlx1 | dr11_v1_chr20_-_52199296_52199311 | 0.66 | 2.3e-03 | Click! |
Activity profile of hlx1 motif
Sorted Z-values of hlx1 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr3_-_48716422 | 0.50 |
ENSDART00000164979
|
si:ch211-114m9.1
|
si:ch211-114m9.1 |
| chr2_+_2223837 | 0.47 |
ENSDART00000101038
ENSDART00000129354 |
tmie
|
transmembrane inner ear |
| chr17_+_9310259 | 0.46 |
ENSDART00000186158
ENSDART00000190329 |
NPAS3
|
neuronal PAS domain protein 3 |
| chr3_+_29714775 | 0.38 |
ENSDART00000041388
|
cacng2a
|
calcium channel, voltage-dependent, gamma subunit 2a |
| chr6_-_28980756 | 0.36 |
ENSDART00000014661
|
glmnb
|
glomulin, FKBP associated protein b |
| chr12_-_2522487 | 0.28 |
ENSDART00000022471
ENSDART00000145213 |
mapk8b
|
mitogen-activated protein kinase 8b |
| chr9_-_23118350 | 0.28 |
ENSDART00000020884
|
lypd6
|
LY6/PLAUR domain containing 6 |
| chr24_-_21404367 | 0.25 |
ENSDART00000152093
|
atp8a2
|
ATPase phospholipid transporting 8A2 |
| chr6_+_51773873 | 0.24 |
ENSDART00000156516
|
tmem74b
|
transmembrane protein 74B |
| chr9_+_45227028 | 0.21 |
ENSDART00000185579
|
adarb1b
|
adenosine deaminase, RNA-specific, B1b |
| chr14_-_7207961 | 0.20 |
ENSDART00000167994
ENSDART00000166532 |
stox2b
|
storkhead box 2b |
| chr3_-_20040636 | 0.19 |
ENSDART00000104118
|
atxn7l3
|
ataxin 7-like 3 |
| chr8_-_39952727 | 0.17 |
ENSDART00000181310
|
cabp1a
|
calcium binding protein 1a |
| chr12_-_6880694 | 0.17 |
ENSDART00000171846
|
pcdh15b
|
protocadherin-related 15b |
| chr10_+_26926654 | 0.16 |
ENSDART00000078980
ENSDART00000100289 |
rab1bb
|
RAB1B, member RAS oncogene family b |
| chr10_-_22918214 | 0.15 |
ENSDART00000163908
|
rnasekb
|
ribonuclease, RNase K b |
| chr22_-_20950448 | 0.14 |
ENSDART00000002029
|
fkbp8
|
FK506 binding protein 8 |
| chr2_-_9818640 | 0.10 |
ENSDART00000139499
ENSDART00000165548 ENSDART00000012442 ENSDART00000046587 |
ap2m1b
|
adaptor-related protein complex 2, mu 1 subunit, b |
| chr13_+_22964868 | 0.10 |
ENSDART00000142129
|
tacr2
|
tachykinin receptor 2 |
| chr16_+_7380463 | 0.09 |
ENSDART00000029727
ENSDART00000149086 |
atg5
|
ATG5 autophagy related 5 homolog (S. cerevisiae) |
| chr8_+_7801060 | 0.09 |
ENSDART00000161618
|
tfe3a
|
transcription factor binding to IGHM enhancer 3a |
| chr2_+_47623202 | 0.08 |
ENSDART00000154465
|
si:ch211-165b10.3
|
si:ch211-165b10.3 |
| chr17_+_49281597 | 0.07 |
ENSDART00000155599
|
zgc:113176
|
zgc:113176 |
| chr16_+_46401576 | 0.07 |
ENSDART00000130264
|
rpz
|
rapunzel |
| chr2_+_45511459 | 0.06 |
ENSDART00000132101
|
aknad1
|
AKNA domain containing 1 |
| chr1_-_26294995 | 0.05 |
ENSDART00000168594
|
cxxc4
|
CXXC finger 4 |
| chr2_+_29842878 | 0.03 |
ENSDART00000131376
|
si:ch211-207d6.2
|
si:ch211-207d6.2 |
| chr10_+_43039947 | 0.03 |
ENSDART00000193434
|
atg10
|
ATG10 autophagy related 10 homolog (S. cerevisiae) |
| chr8_-_11834599 | 0.02 |
ENSDART00000190986
|
rapgef1a
|
Rap guanine nucleotide exchange factor (GEF) 1a |
| chr1_+_6172786 | 0.02 |
ENSDART00000126468
|
prkag3a
|
protein kinase, AMP-activated, gamma 3a non-catalytic subunit |
| chr9_+_39026311 | 0.02 |
ENSDART00000188203
|
cps1
|
carbamoyl-phosphate synthase 1, mitochondrial |
| chr8_+_12930216 | 0.00 |
ENSDART00000115405
|
KIF2A
|
zgc:103670 |
| chr4_-_22338906 | 0.00 |
ENSDART00000131402
|
golgb1
|
golgin B1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of hlx1
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.5 | GO:0099563 | modification of synaptic structure(GO:0099563) |
| 0.0 | 0.3 | GO:0060827 | regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation(GO:0060827) |
| 0.0 | 0.1 | GO:0043416 | regulation of skeletal muscle tissue regeneration(GO:0043416) |
| 0.0 | 0.5 | GO:0060088 | auditory receptor cell stereocilium organization(GO:0060088) |
| 0.0 | 0.4 | GO:0098943 | neurotransmitter receptor transport, postsynaptic endosome to lysosome(GO:0098943) |
| 0.0 | 0.2 | GO:0006382 | adenosine to inosine editing(GO:0006382) |
| 0.0 | 0.2 | GO:0050908 | detection of light stimulus involved in visual perception(GO:0050908) detection of light stimulus involved in sensory perception(GO:0050962) |
| 0.0 | 0.1 | GO:1902093 | positive regulation of sperm motility(GO:1902093) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0097225 | sperm midpiece(GO:0097225) |
| 0.0 | 0.3 | GO:0046658 | anchored component of plasma membrane(GO:0046658) |
| 0.0 | 0.1 | GO:0034045 | pre-autophagosomal structure membrane(GO:0034045) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.4 | GO:0055105 | ubiquitin-protein transferase inhibitor activity(GO:0055105) |
| 0.0 | 0.3 | GO:0099602 | acetylcholine receptor regulator activity(GO:0030548) neurotransmitter receptor regulator activity(GO:0099602) |
| 0.0 | 0.3 | GO:0016909 | JUN kinase activity(GO:0004705) SAP kinase activity(GO:0016909) |
| 0.0 | 0.2 | GO:0003726 | double-stranded RNA adenosine deaminase activity(GO:0003726) |
| 0.0 | 0.1 | GO:0004995 | tachykinin receptor activity(GO:0004995) |