PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
hnf1a | dr11_v1_chr8_+_39802506_39802506 | 0.07 | 7.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_35066457 Show fit | 14.42 |
ENSDART00000058067
|
zgc:112160 |
|
chr4_+_18804317 Show fit | 11.66 |
ENSDART00000101043
|
solute carrier family 26 (anion exchanger), member 3, tandem duplicate 2 |
|
chr5_-_30620625 Show fit | 10.38 |
ENSDART00000098273
|
transcobalamin like |
|
chr24_-_4765740 Show fit | 10.27 |
ENSDART00000121576
|
carboxypeptidase B1 (tissue) |
|
chr5_+_45677781 Show fit | 9.71 |
ENSDART00000163120
ENSDART00000126537 |
group-specific component (vitamin D binding protein) |
|
chr1_-_59348118 Show fit | 9.50 |
ENSDART00000170901
|
cytochrome P450, family 3, subfamily A, polypeptide 65 |
|
chr9_-_9982696 Show fit | 8.77 |
ENSDART00000192548
ENSDART00000125852 |
UDP glucuronosyltransferase 1 family a, b |
|
chr9_-_9977827 Show fit | 8.17 |
ENSDART00000187315
ENSDART00000010246 |
UDP glucuronosyltransferase 1 family a, b |
|
chr6_-_39344259 Show fit | 7.23 |
ENSDART00000104074
|
zgc:158846 |
|
chr20_+_35473288 Show fit | 7.12 |
ENSDART00000047195
|
meprin A, alpha (PABA peptide hydrolase), tandem duplicate 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 29.4 | GO:0010951 | negative regulation of endopeptidase activity(GO:0010951) |
0.2 | 18.6 | GO:0009410 | response to xenobiotic stimulus(GO:0009410) |
0.0 | 18.0 | GO:0006508 | proteolysis(GO:0006508) |
0.5 | 11.7 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.4 | 10.3 | GO:0051180 | vitamin transport(GO:0051180) |
0.6 | 8.0 | GO:0016556 | mRNA modification(GO:0016556) |
1.2 | 6.0 | GO:0030299 | intestinal cholesterol absorption(GO:0030299) |
0.4 | 5.3 | GO:0006123 | mitochondrial electron transport, cytochrome c to oxygen(GO:0006123) |
0.5 | 5.0 | GO:0034312 | diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512) |
0.3 | 4.2 | GO:0015721 | bile acid and bile salt transport(GO:0015721) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 48.3 | GO:0005615 | extracellular space(GO:0005615) |
0.0 | 13.8 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
0.9 | 10.3 | GO:0045095 | keratin filament(GO:0045095) |
0.1 | 7.6 | GO:0016324 | apical plasma membrane(GO:0016324) |
0.0 | 7.5 | GO:0043235 | receptor complex(GO:0043235) |
0.1 | 6.0 | GO:0005604 | basement membrane(GO:0005604) |
0.0 | 5.6 | GO:0000139 | Golgi membrane(GO:0000139) |
0.4 | 5.3 | GO:0005751 | mitochondrial respiratory chain complex IV(GO:0005751) |
0.1 | 5.0 | GO:0005901 | caveola(GO:0005901) plasma membrane raft(GO:0044853) |
0.1 | 3.6 | GO:1902710 | GABA receptor complex(GO:1902710) GABA-A receptor complex(GO:1902711) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 32.4 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.3 | 29.4 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.1 | 16.8 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.7 | 13.6 | GO:0019531 | oxalate transmembrane transporter activity(GO:0019531) |
0.1 | 10.5 | GO:0008395 | steroid hydroxylase activity(GO:0008395) |
0.4 | 10.3 | GO:0004181 | metallocarboxypeptidase activity(GO:0004181) |
3.2 | 9.7 | GO:0005499 | vitamin D binding(GO:0005499) |
0.1 | 8.4 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.1 | 8.0 | GO:0003727 | single-stranded RNA binding(GO:0003727) |
0.2 | 6.1 | GO:0016675 | cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.1 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.2 | 3.5 | PID IL27 PATHWAY | IL27-mediated signaling events |
0.1 | 3.4 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
0.1 | 3.3 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.1 | 2.5 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 2.1 | PID TGFBR PATHWAY | TGF-beta receptor signaling |
0.1 | 1.7 | PID ALK1 PATHWAY | ALK1 signaling events |
0.0 | 1.6 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.0 | 0.8 | PID INSULIN PATHWAY | Insulin Pathway |
0.0 | 0.7 | PID FGF PATHWAY | FGF signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 10.4 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.0 | 5.6 | REACTOME MRNA PROCESSING | Genes involved in mRNA Processing |
0.2 | 5.2 | REACTOME PEROXISOMAL LIPID METABOLISM | Genes involved in Peroxisomal lipid metabolism |
0.1 | 5.0 | REACTOME GLYCOSPHINGOLIPID METABOLISM | Genes involved in Glycosphingolipid metabolism |
0.7 | 4.2 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
0.2 | 3.6 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |
0.1 | 3.6 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.0 | 3.4 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.3 | 3.3 | REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT | Genes involved in Chylomicron-mediated lipid transport |
0.2 | 3.0 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |