PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
hnf4g | dr11_v1_chr24_-_23671709_23671709 | 0.58 | 9.4e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr9_+_1138802 Show fit | 2.01 |
ENSDART00000191130
ENSDART00000187308 |
solute carrier family 15 (oligopeptide transporter), member 1a |
|
chr9_+_1138323 Show fit | 1.79 |
ENSDART00000190352
ENSDART00000190387 |
solute carrier family 15 (oligopeptide transporter), member 1a |
|
chr20_-_25522911 Show fit | 1.72 |
ENSDART00000063058
|
cytochrome P450, family 2, subfamily N, polypeptide 13 |
|
chr8_-_20838342 Show fit | 1.55 |
ENSDART00000141345
|
si:ch211-133l5.7 |
|
chr22_-_31517300 Show fit | 1.43 |
ENSDART00000164799
|
solute carrier family 6 (neurotransmitter transporter), member 6b |
|
chr17_+_50701748 Show fit | 1.43 |
ENSDART00000191938
ENSDART00000183220 ENSDART00000049464 |
fermitin family member 2 |
|
chr13_-_303137 Show fit | 1.37 |
ENSDART00000099131
|
chitin synthase 1 |
|
chr9_-_44953664 Show fit | 1.28 |
ENSDART00000188558
ENSDART00000185210 |
villin 1 |
|
chr23_+_19790962 Show fit | 1.27 |
ENSDART00000142228
|
filamin A, alpha (actin binding protein 280) |
|
chr12_+_22607761 Show fit | 1.05 |
ENSDART00000153112
|
si:dkey-219e21.2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 3.8 | GO:0006857 | oligopeptide transport(GO:0006857) |
0.0 | 1.8 | GO:0042738 | drug metabolic process(GO:0017144) drug catabolic process(GO:0042737) exogenous drug catabolic process(GO:0042738) |
0.0 | 1.5 | GO:0048920 | posterior lateral line neuromast primordium migration(GO:0048920) |
0.0 | 1.5 | GO:0070509 | calcium ion import(GO:0070509) |
0.3 | 1.4 | GO:0006031 | chitin biosynthetic process(GO:0006031) glucosamine-containing compound biosynthetic process(GO:1901073) |
0.0 | 1.4 | GO:0055008 | cardiac muscle tissue morphogenesis(GO:0055008) |
0.0 | 1.4 | GO:0072348 | sulfur compound transport(GO:0072348) |
0.3 | 1.3 | GO:2000392 | lamellipodium morphogenesis(GO:0072673) regulation of lamellipodium morphogenesis(GO:2000392) |
0.0 | 1.0 | GO:0060841 | venous blood vessel development(GO:0060841) |
0.0 | 1.0 | GO:0035118 | embryonic pectoral fin morphogenesis(GO:0035118) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.4 | GO:0031258 | lamellipodium membrane(GO:0031258) |
0.2 | 1.4 | GO:0030428 | cell septum(GO:0030428) |
0.3 | 1.3 | GO:0032433 | filopodium tip(GO:0032433) |
0.0 | 1.2 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
0.0 | 0.5 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 0.5 | GO:0002102 | podosome(GO:0002102) |
0.0 | 0.4 | GO:0005779 | integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231) |
0.0 | 0.4 | GO:0000220 | vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220) |
0.1 | 0.3 | GO:0070876 | SOSS complex(GO:0070876) |
0.0 | 0.2 | GO:0033557 | Slx1-Slx4 complex(GO:0033557) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 3.8 | GO:0071916 | dipeptide transporter activity(GO:0042936) dipeptide transmembrane transporter activity(GO:0071916) |
0.0 | 1.8 | GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) |
0.0 | 1.6 | GO:0005343 | organic acid:sodium symporter activity(GO:0005343) |
0.0 | 1.6 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
0.2 | 1.4 | GO:0004100 | chitin synthase activity(GO:0004100) |
0.0 | 1.4 | GO:0005178 | integrin binding(GO:0005178) |
0.0 | 1.1 | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding(GO:0005546) |
0.3 | 1.0 | GO:0004301 | epoxide hydrolase activity(GO:0004301) |
0.0 | 0.8 | GO:0008331 | high voltage-gated calcium channel activity(GO:0008331) |
0.1 | 0.7 | GO:0016803 | ether hydrolase activity(GO:0016803) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.3 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.1 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.1 | 0.6 | REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS | Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors) |
0.0 | 0.6 | REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION | Genes involved in GABA synthesis, release, reuptake and degradation |
0.0 | 0.4 | REACTOME TRANSPORT OF ORGANIC ANIONS | Genes involved in Transport of organic anions |
0.0 | 0.4 | REACTOME HDL MEDIATED LIPID TRANSPORT | Genes involved in HDL-mediated lipid transport |
0.0 | 0.4 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |