PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
hoxa11a | dr11_v1_chr19_+_19737214_19737300 | 0.69 | 1.2e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr21_+_13128180 Show fit | 0.92 |
ENSDART00000081426
|
outer dense fiber of sperm tails 2a |
|
chr13_-_25196758 Show fit | 0.69 |
ENSDART00000184722
|
adenosine kinase a |
|
chr11_+_2198831 Show fit | 0.59 |
ENSDART00000160515
|
homeobox C6b |
|
chr12_-_26851726 Show fit | 0.47 |
ENSDART00000047724
|
zinc finger E-box binding homeobox 1b |
|
chr24_-_21090447 Show fit | 0.46 |
ENSDART00000136507
ENSDART00000140786 ENSDART00000184841 |
queuine tRNA-ribosyltransferase accessory subunit 2 |
|
chr23_+_36087219 Show fit | 0.45 |
ENSDART00000154825
|
homeobox C3a |
|
chr21_+_13127742 Show fit | 0.43 |
ENSDART00000179221
|
outer dense fiber of sperm tails 2a |
|
chr7_+_20524064 Show fit | 0.42 |
ENSDART00000052917
|
solute carrier family 3 (amino acid transporter heavy chain), member 2a |
|
chr3_-_40254634 Show fit | 0.41 |
ENSDART00000154562
|
DNA topoisomerase III alpha |
|
chr1_-_462165 Show fit | 0.39 |
ENSDART00000152799
|
si:ch73-244f7.3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.0 | GO:0070587 | regulation of cell-cell adhesion involved in gastrulation(GO:0070587) |
0.1 | 0.7 | GO:0044209 | AMP salvage(GO:0044209) |
0.0 | 0.4 | GO:0060142 | regulation of syncytium formation by plasma membrane fusion(GO:0060142) |
0.0 | 0.4 | GO:0006265 | DNA topological change(GO:0006265) |
0.0 | 0.4 | GO:0048026 | positive regulation of mRNA splicing, via spliceosome(GO:0048026) |
0.0 | 0.4 | GO:0018023 | peptidyl-lysine trimethylation(GO:0018023) |
0.0 | 0.3 | GO:0044211 | CTP salvage(GO:0044211) |
0.0 | 0.3 | GO:0046958 | nonassociative learning(GO:0046958) habituation(GO:0046959) |
0.0 | 0.3 | GO:0031581 | hemidesmosome assembly(GO:0031581) |
0.0 | 0.3 | GO:0021654 | rhombomere boundary formation(GO:0021654) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.6 | GO:0097610 | cleavage furrow(GO:0032154) cell surface furrow(GO:0097610) |
0.0 | 0.4 | GO:0005689 | U12-type spliceosomal complex(GO:0005689) |
0.0 | 0.4 | GO:0035371 | microtubule plus-end(GO:0035371) |
0.1 | 0.3 | GO:0000444 | MIS12/MIND type complex(GO:0000444) |
0.0 | 0.3 | GO:0030122 | AP-2 adaptor complex(GO:0030122) |
0.0 | 0.3 | GO:0030056 | hemidesmosome(GO:0030056) |
0.0 | 0.2 | GO:0005913 | cell-cell adherens junction(GO:0005913) zonula adherens(GO:0005915) |
0.0 | 0.2 | GO:1902636 | kinociliary basal body(GO:1902636) |
0.0 | 0.2 | GO:0034045 | pre-autophagosomal structure membrane(GO:0034045) |
0.0 | 0.2 | GO:0005782 | peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.7 | GO:0004001 | adenosine kinase activity(GO:0004001) |
0.0 | 0.6 | GO:0004697 | protein kinase C activity(GO:0004697) calcium-dependent protein kinase C activity(GO:0004698) |
0.0 | 0.4 | GO:0003917 | DNA topoisomerase type I activity(GO:0003917) |
0.0 | 0.4 | GO:0051010 | microtubule plus-end binding(GO:0051010) |
0.0 | 0.3 | GO:0004849 | uridine kinase activity(GO:0004849) |
0.0 | 0.3 | GO:0030506 | ankyrin binding(GO:0030506) |
0.0 | 0.3 | GO:0035615 | clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748) |
0.0 | 0.3 | GO:0046875 | ephrin receptor binding(GO:0046875) |
0.0 | 0.2 | GO:0045294 | alpha-catenin binding(GO:0045294) |
0.0 | 0.2 | GO:0071933 | Arp2/3 complex binding(GO:0071933) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.4 | PID ATM PATHWAY | ATM pathway |
0.0 | 0.3 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | REACTOME RETROGRADE NEUROTROPHIN SIGNALLING | Genes involved in Retrograde neurotrophin signalling |
0.1 | 0.2 | REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS | Genes involved in Apoptotic cleavage of cell adhesion proteins |
0.0 | 0.2 | REACTOME VITAMIN B5 PANTOTHENATE METABOLISM | Genes involved in Vitamin B5 (pantothenate) metabolism |
0.0 | 0.1 | REACTOME ACYL CHAIN REMODELLING OF PG | Genes involved in Acyl chain remodelling of PG |