PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
hoxd4a | dr11_v1_chr9_-_1951144_1951144 | -0.31 | 1.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr16_+_26017360 Show fit | 0.92 |
ENSDART00000149466
|
protease, serine, 59, tandem duplicate 2 |
|
chr3_+_21225750 Show fit | 0.64 |
ENSDART00000139213
|
zgc:153968 |
|
chr22_+_7439186 Show fit | 0.56 |
ENSDART00000190667
|
zgc:92041 |
|
chr10_+_25726694 Show fit | 0.55 |
ENSDART00000140308
|
UDP glucuronosyltransferase 5 family, polypeptide D1 |
|
chr7_-_38698583 Show fit | 0.51 |
ENSDART00000173900
ENSDART00000126737 |
CD59 molecule (CD59 blood group) |
|
chr10_+_17776981 Show fit | 0.40 |
ENSDART00000141693
|
chemokine (C-C motif) ligand 19b |
|
chr15_+_45640906 Show fit | 0.37 |
ENSDART00000149361
ENSDART00000149079 |
S-antigen; retina and pineal gland (arrestin) b |
|
chr4_+_7841627 Show fit | 0.36 |
ENSDART00000037997
|
upper zone of growth plate and cartilage matrix associated a |
|
chr3_+_19460991 Show fit | 0.36 |
ENSDART00000169124
|
phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a |
|
chr21_-_22689805 Show fit | 0.32 |
ENSDART00000157560
ENSDART00000110792 |
grass carp reovirus (GCRV)-induced gene 2e |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | GO:0050829 | defense response to Gram-negative bacterium(GO:0050829) |
0.1 | 0.4 | GO:0045745 | positive regulation of G-protein coupled receptor protein signaling pathway(GO:0045745) |
0.0 | 0.4 | GO:0002031 | G-protein coupled receptor internalization(GO:0002031) |
0.0 | 0.4 | GO:0098943 | neurotransmitter receptor transport, postsynaptic endosome to lysosome(GO:0098943) |
0.0 | 0.4 | GO:0045667 | regulation of osteoblast differentiation(GO:0045667) |
0.1 | 0.3 | GO:1904983 | transmembrane glycine transport from cytosol to mitochondrion(GO:1904983) |
0.1 | 0.3 | GO:0046485 | ether lipid metabolic process(GO:0046485) |
0.0 | 0.3 | GO:0072488 | ammonium transmembrane transport(GO:0072488) |
0.0 | 0.3 | GO:0018057 | peptidyl-lysine oxidation(GO:0018057) |
0.0 | 0.3 | GO:0032291 | central nervous system myelination(GO:0022010) axon ensheathment in central nervous system(GO:0032291) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.4 | GO:0042622 | photoreceptor outer segment membrane(GO:0042622) |
0.0 | 0.4 | GO:0001917 | photoreceptor inner segment(GO:0001917) |
0.0 | 0.3 | GO:0045277 | respiratory chain complex IV(GO:0045277) |
0.0 | 0.3 | GO:0090665 | dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665) |
0.0 | 0.2 | GO:0000126 | transcription factor TFIIIB complex(GO:0000126) |
0.0 | 0.2 | GO:0005614 | interstitial matrix(GO:0005614) |
0.0 | 0.2 | GO:0031838 | haptoglobin-hemoglobin complex(GO:0031838) |
0.0 | 0.2 | GO:0042627 | chylomicron(GO:0042627) |
0.0 | 0.1 | GO:0034457 | Mpp10 complex(GO:0034457) |
0.0 | 0.1 | GO:0005775 | vacuolar lumen(GO:0005775) lysosomal lumen(GO:0043202) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.5 | GO:0070891 | lipoteichoic acid binding(GO:0070891) |
0.0 | 0.4 | GO:0047555 | 3',5'-cyclic-GMP phosphodiesterase activity(GO:0047555) |
0.0 | 0.3 | GO:0016714 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen(GO:0016714) |
0.0 | 0.3 | GO:0015187 | glycine transmembrane transporter activity(GO:0015187) |
0.0 | 0.3 | GO:0005223 | intracellular cyclic nucleotide activated cation channel activity(GO:0005221) intracellular cAMP activated cation channel activity(GO:0005222) intracellular cGMP activated cation channel activity(GO:0005223) cyclic nucleotide-gated ion channel activity(GO:0043855) |
0.0 | 0.3 | GO:0004720 | protein-lysine 6-oxidase activity(GO:0004720) |
0.0 | 0.3 | GO:0008519 | ammonium transmembrane transporter activity(GO:0008519) |
0.0 | 0.3 | GO:0015002 | cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676) |
0.1 | 0.2 | GO:0033961 | cis-stilbene-oxide hydrolase activity(GO:0033961) |
0.0 | 0.2 | GO:0060228 | phosphatidylcholine-sterol O-acyltransferase activator activity(GO:0060228) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.2 | REACTOME KERATAN SULFATE DEGRADATION | Genes involved in Keratan sulfate degradation |
0.0 | 0.1 | REACTOME VITAMIN B5 PANTOTHENATE METABOLISM | Genes involved in Vitamin B5 (pantothenate) metabolism |