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PRJEB1986: zebrafish developmental stages transcriptome

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Results for lmx1ba+lmx1bb_lmx1al

Z-value: 0.46

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Transcription factors associated with lmx1ba+lmx1bb_lmx1al

Gene Symbol Gene ID Gene Info
ENSDARG00000068365 LIM homeobox transcription factor 1, beta b
ENSDARG00000104815 LIM homeobox transcription factor 1, beta a
ENSDARG00000077915 LIM homeobox transcription factor 1, alpha-like

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
lmx1aldr11_v1_chr3_+_52806347_52806441-0.812.4e-05Click!
lmx1badr11_v1_chr5_-_5147220_5147336-0.381.1e-01Click!
lmx1bbdr11_v1_chr8_-_33381913_333819130.292.3e-01Click!

Activity profile of lmx1ba+lmx1bb_lmx1al motif

1dpf-1 1dpf-2 1dpf-3 1dpf-4 1dpf-5 2dpf-1 2dpf-2 2dpf-3 2dpf-4 3dpf-1 3dpf-2 3dpf-3 3dpf-4 5dpf-1 5dpf-2 5dpf-3 5dpf-4 5dpf-5 14dpf-1 −0.08−0.06−0.04−0.0200.020.040.060.08
activity (log2(tpm) per TFBS)

Sorted Z-values of lmx1ba+lmx1bb_lmx1al motif

−0.8−0.6−0.4−0.200.20.40.60.85dpf-2 5dpf-3 5dpf-4 5dpf-5 5dpf-1 14dpf-1 2dpf-4 2dpf-2 2dpf-1 3dpf-2 2dpf-3 3dpf-3 3dpf-4 1dpf-5 1dpf-3 1dpf-1 3dpf-1 1dpf-2 1dpf-4 
Z-value

Network of associatons between targets according to the STRING database.

First level regulatory network of lmx1ba+lmx1bb_lmx1al

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: