PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
mafaa | dr11_v1_chr6_-_32703317_32703317 | 0.01 | 9.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr24_-_41312459 Show fit | 0.99 |
ENSDART00000041349
|
crystallin, gamma N2 |
|
chr16_+_1353894 Show fit | 0.80 |
ENSDART00000148426
|
cugbp, Elav-like family member 3b |
|
chr22_-_15280638 Show fit | 0.70 |
ENSDART00000063008
|
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase |
|
chr23_-_21453614 Show fit | 0.68 |
ENSDART00000079274
|
hairy-related 4, tandem duplicate 1 |
|
chr1_+_59090972 Show fit | 0.67 |
ENSDART00000171497
|
microfibril associated protein 4 |
|
chr1_+_59090743 Show fit | 0.66 |
ENSDART00000100199
|
microfibril associated protein 4 |
|
chr23_+_3538463 Show fit | 0.64 |
ENSDART00000172758
|
si:dkey-9l20.3 |
|
chr12_-_47558276 Show fit | 0.63 |
ENSDART00000160260
|
gremlin 2, DAN family BMP antagonist b |
|
chr23_+_21459263 Show fit | 0.59 |
ENSDART00000104209
|
hairy-related 4, tandem duplicate 3 |
|
chr11_+_12719944 Show fit | 0.58 |
ENSDART00000054837
ENSDART00000144954 |
adaptor-related protein complex 1, sigma 2 subunit |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.9 | GO:0001867 | complement activation, lectin pathway(GO:0001867) |
0.1 | 1.3 | GO:0048936 | peripheral nervous system neuron axonogenesis(GO:0048936) |
0.0 | 0.8 | GO:0006376 | mRNA splice site selection(GO:0006376) |
0.1 | 0.6 | GO:0038098 | sequestering of BMP from receptor via BMP binding(GO:0038098) |
0.0 | 0.5 | GO:0045879 | negative regulation of smoothened signaling pathway(GO:0045879) |
0.1 | 0.3 | GO:0006335 | DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723) |
0.0 | 0.3 | GO:0044528 | regulation of mitochondrial mRNA stability(GO:0044528) |
0.0 | 0.3 | GO:0036444 | calcium ion transmembrane import into mitochondrion(GO:0036444) |
0.0 | 0.3 | GO:0045454 | cell redox homeostasis(GO:0045454) |
0.0 | 0.2 | GO:0048014 | Tie signaling pathway(GO:0048014) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | GO:0016602 | CCAAT-binding factor complex(GO:0016602) |
0.0 | 0.4 | GO:0048188 | Set1C/COMPASS complex(GO:0048188) |
0.0 | 0.3 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 0.3 | GO:1990246 | uniplex complex(GO:1990246) |
0.0 | 0.2 | GO:0000439 | core TFIIH complex(GO:0000439) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.9 | GO:0003823 | antigen binding(GO:0003823) |
0.0 | 1.0 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.2 | 0.7 | GO:0033829 | O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity(GO:0033829) |
0.1 | 0.6 | GO:0036122 | BMP binding(GO:0036122) |
0.0 | 0.3 | GO:0004791 | thioredoxin-disulfide reductase activity(GO:0004791) |
0.0 | 0.2 | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor(GO:0016774) |
0.0 | 0.2 | GO:0008508 | bile acid:sodium symporter activity(GO:0008508) |
0.0 | 0.2 | GO:0047238 | glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity(GO:0047238) |
0.0 | 0.1 | GO:0003994 | aconitate hydratase activity(GO:0003994) |
0.0 | 0.1 | GO:0001042 | RNA polymerase I core binding(GO:0001042) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.9 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.7 | REACTOME PRE NOTCH PROCESSING IN GOLGI | Genes involved in Pre-NOTCH Processing in Golgi |
0.0 | 0.6 | REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION | Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression |
0.1 | 0.5 | REACTOME ACTIVATION OF CHAPERONE GENES BY ATF6 ALPHA | Genes involved in Activation of Chaperone Genes by ATF6-alpha |
0.0 | 0.2 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
0.0 | 0.2 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
0.0 | 0.1 | REACTOME CHONDROITIN SULFATE BIOSYNTHESIS | Genes involved in Chondroitin sulfate biosynthesis |