PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
meox1 | dr11_v1_chr12_+_27462225_27462225 | -0.70 | 7.5e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_17676745 Show fit | 2.81 |
ENSDART00000030665
|
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 |
|
chr11_+_30244356 Show fit | 2.58 |
ENSDART00000036050
ENSDART00000150080 |
retinoschisin 1a |
|
chr3_-_50443607 Show fit | 2.44 |
ENSDART00000074036
|
recoverin a |
|
chr25_+_29160102 Show fit | 2.38 |
ENSDART00000162854
|
pyruvate kinase M1/2b |
|
chr16_+_5774977 Show fit | 2.31 |
ENSDART00000134202
|
cholecystokinin a |
|
chr19_+_40856534 Show fit | 2.28 |
ENSDART00000051950
|
guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 |
|
chr19_+_40856807 Show fit | 2.09 |
ENSDART00000139083
|
guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 |
|
chr1_-_23308225 Show fit | 1.77 |
ENSDART00000137567
ENSDART00000008201 |
small integral membrane protein 14 |
|
chr17_-_37395460 Show fit | 1.68 |
ENSDART00000148160
ENSDART00000075975 |
cysteine-rich protein 1 |
|
chr1_-_50859053 Show fit | 1.63 |
ENSDART00000132779
ENSDART00000137648 |
si:dkeyp-123h10.2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 2.8 | GO:0015860 | intracellular nucleoside transport(GO:0015859) purine nucleoside transmembrane transport(GO:0015860) purine nucleotide transport(GO:0015865) ATP transport(GO:0015867) purine ribonucleotide transport(GO:0015868) adenine nucleotide transport(GO:0051503) mitochondrial ATP transmembrane transport(GO:1990544) |
0.0 | 2.8 | GO:0032869 | cellular response to insulin stimulus(GO:0032869) |
0.2 | 2.4 | GO:0036368 | cone photoresponse recovery(GO:0036368) |
0.2 | 1.9 | GO:1904071 | presynaptic active zone assembly(GO:1904071) |
0.6 | 1.7 | GO:0097237 | cellular response to antibiotic(GO:0071236) cellular response to toxic substance(GO:0097237) |
0.4 | 1.6 | GO:0046166 | methylglyoxal biosynthetic process(GO:0019242) glyceraldehyde-3-phosphate biosynthetic process(GO:0046166) |
0.1 | 1.6 | GO:0055064 | chloride ion homeostasis(GO:0055064) |
0.0 | 1.5 | GO:0042761 | very long-chain fatty acid biosynthetic process(GO:0042761) |
0.0 | 1.5 | GO:0006368 | transcription elongation from RNA polymerase II promoter(GO:0006368) |
0.0 | 1.2 | GO:0045839 | negative regulation of mitotic nuclear division(GO:0045839) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 4.4 | GO:0031680 | G-protein beta/gamma-subunit complex(GO:0031680) |
0.0 | 3.9 | GO:0030424 | axon(GO:0030424) |
0.2 | 1.9 | GO:0098982 | GABA-ergic synapse(GO:0098982) |
0.3 | 1.5 | GO:0030891 | VCB complex(GO:0030891) |
0.0 | 1.5 | GO:0008021 | synaptic vesicle(GO:0008021) |
0.0 | 1.2 | GO:0043204 | perikaryon(GO:0043204) |
0.0 | 1.2 | GO:0099501 | synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501) |
0.1 | 1.1 | GO:0032809 | neuronal cell body membrane(GO:0032809) cell body membrane(GO:0044298) |
0.0 | 1.1 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.1 | 1.0 | GO:0098844 | postsynaptic endocytic zone membrane(GO:0098844) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.4 | GO:0031681 | G-protein beta-subunit binding(GO:0031681) |
0.7 | 2.8 | GO:0005471 | ATP:ADP antiporter activity(GO:0005471) |
0.1 | 2.7 | GO:0005184 | neuropeptide hormone activity(GO:0005184) |
0.4 | 2.4 | GO:0004743 | pyruvate kinase activity(GO:0004743) |
0.0 | 2.2 | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors(GO:0016627) |
0.1 | 1.9 | GO:0098882 | structural constituent of presynaptic active zone(GO:0098882) |
0.4 | 1.6 | GO:0004807 | triose-phosphate isomerase activity(GO:0004807) methylglyoxal synthase activity(GO:0008929) |
0.2 | 1.6 | GO:0004459 | L-lactate dehydrogenase activity(GO:0004459) |
0.3 | 1.3 | GO:0031841 | neuropeptide Y receptor binding(GO:0031841) type 2 neuropeptide Y receptor binding(GO:0031843) |
0.1 | 1.1 | GO:0004383 | guanylate cyclase activity(GO:0004383) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 6.0 | PID RHODOPSIN PATHWAY | Visual signal transduction: Rods |
0.0 | 1.8 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 1.0 | PID MTOR 4PATHWAY | mTOR signaling pathway |
0.0 | 0.8 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 0.6 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 0.6 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 0.3 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.1 | 4.4 | REACTOME OLFACTORY SIGNALING PATHWAY | Genes involved in Olfactory Signaling Pathway |
0.1 | 2.5 | REACTOME INTERACTIONS OF VPR WITH HOST CELLULAR PROTEINS | Genes involved in Interactions of Vpr with host cellular proteins |
0.0 | 1.5 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.0 | 1.3 | REACTOME KERATAN SULFATE BIOSYNTHESIS | Genes involved in Keratan sulfate biosynthesis |
0.2 | 1.1 | REACTOME SEROTONIN RECEPTORS | Genes involved in Serotonin receptors |
0.2 | 1.0 | REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK | Genes involved in Regulation of Rheb GTPase activity by AMPK |
0.1 | 1.0 | REACTOME INHIBITION OF INSULIN SECRETION BY ADRENALINE NORADRENALINE | Genes involved in Inhibition of Insulin Secretion by Adrenaline/Noradrenaline |
0.0 | 1.0 | REACTOME AMYLOIDS | Genes involved in Amyloids |
0.0 | 0.8 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 0.8 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |