PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
meox2a | dr11_v1_chr15_-_34458495_34458495 | 0.36 | 1.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_+_35075847 Show fit | 2.20 |
ENSDART00000193469
ENSDART00000037346 |
chymotrypsinogen B1 |
|
chr5_-_26118855 Show fit | 1.99 |
ENSDART00000009028
|
elastase 3 like |
|
chr2_+_50862527 Show fit | 1.66 |
ENSDART00000169800
ENSDART00000158847 ENSDART00000160900 |
adenylate cyclase activating polypeptide 1a (pituitary) receptor type I |
|
chr5_+_2815021 Show fit | 1.31 |
ENSDART00000020472
|
4-hydroxyphenylpyruvate dioxygenase a |
|
chr1_-_43905252 Show fit | 1.22 |
ENSDART00000135477
ENSDART00000132089 |
si:dkey-22i16.3 |
|
chr11_+_43043171 Show fit | 1.18 |
ENSDART00000180344
|
|
|
chr18_+_7286788 Show fit | 1.05 |
ENSDART00000022998
|
si:ch73-86n2.1 |
|
chr6_-_55585423 Show fit | 1.04 |
ENSDART00000157129
|
solute carrier family 12 (potassium/chloride transporter), member 5a |
|
chr23_-_306796 Show fit | 0.97 |
ENSDART00000143125
|
ankyrin repeat and sterile alpha motif domain containing 1Aa |
|
chr16_+_20161805 Show fit | 0.93 |
ENSDART00000192146
|
chromosome 16 C2orf66 homolog |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.8 | GO:0035622 | intrahepatic bile duct development(GO:0035622) |
0.0 | 1.8 | GO:0007200 | phospholipase C-activating G-protein coupled receptor signaling pathway(GO:0007200) |
0.1 | 1.6 | GO:0055064 | chloride ion homeostasis(GO:0055064) |
0.4 | 1.3 | GO:1901187 | regulation of ephrin receptor signaling pathway(GO:1901187) |
0.2 | 1.3 | GO:0006572 | tyrosine catabolic process(GO:0006572) |
0.0 | 1.0 | GO:0016601 | Rac protein signal transduction(GO:0016601) |
0.0 | 0.9 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.1 | 0.8 | GO:0006607 | NLS-bearing protein import into nucleus(GO:0006607) |
0.1 | 0.8 | GO:0032309 | icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) arachidonate transport(GO:1903963) |
0.0 | 0.8 | GO:0032456 | endocytic recycling(GO:0032456) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | GO:0043296 | apical junction complex(GO:0043296) |
0.0 | 1.5 | GO:0000421 | autophagosome membrane(GO:0000421) |
0.0 | 1.4 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.0 | 1.3 | GO:0030964 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.0 | 0.8 | GO:0005861 | troponin complex(GO:0005861) |
0.0 | 0.7 | GO:0031430 | M band(GO:0031430) |
0.0 | 0.7 | GO:0005901 | caveola(GO:0005901) plasma membrane raft(GO:0044853) |
0.0 | 0.5 | GO:0098982 | GABA-ergic synapse(GO:0098982) |
0.1 | 0.4 | GO:1990604 | IRE1-TRAF2-ASK1 complex(GO:1990604) |
0.1 | 0.4 | GO:0071986 | Ragulator complex(GO:0071986) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.8 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.3 | 1.7 | GO:0004999 | vasoactive intestinal polypeptide receptor activity(GO:0004999) |
0.4 | 1.3 | GO:0003868 | 4-hydroxyphenylpyruvate dioxygenase activity(GO:0003868) |
0.0 | 1.0 | GO:0015377 | cation:chloride symporter activity(GO:0015377) potassium:chloride symporter activity(GO:0015379) |
0.0 | 0.9 | GO:0005452 | inorganic anion exchanger activity(GO:0005452) |
0.0 | 0.8 | GO:0061608 | nuclear import signal receptor activity(GO:0061608) |
0.0 | 0.8 | GO:0046875 | ephrin receptor binding(GO:0046875) |
0.0 | 0.8 | GO:0004623 | phospholipase A2 activity(GO:0004623) |
0.0 | 0.7 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
0.0 | 0.7 | GO:0032266 | phosphatidylinositol-3-phosphate binding(GO:0032266) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | PID FCER1 PATHWAY | Fc-epsilon receptor I signaling in mast cells |
0.1 | 0.4 | ST IL 13 PATHWAY | Interleukin 13 (IL-13) Pathway |
0.0 | 0.4 | PID RET PATHWAY | Signaling events regulated by Ret tyrosine kinase |
0.0 | 0.3 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.1 | 0.2 | ST JAK STAT PATHWAY | Jak-STAT Pathway |
0.0 | 0.2 | PID CERAMIDE PATHWAY | Ceramide signaling pathway |
0.0 | 0.2 | PID SYNDECAN 2 PATHWAY | Syndecan-2-mediated signaling events |
0.0 | 0.2 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.0 | 0.1 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 2.2 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.0 | 1.6 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.0 | 1.2 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.2 | 0.8 | REACTOME ACYL CHAIN REMODELLING OF PI | Genes involved in Acyl chain remodelling of PI |
0.1 | 0.6 | REACTOME HDL MEDIATED LIPID TRANSPORT | Genes involved in HDL-mediated lipid transport |
0.0 | 0.6 | REACTOME NA CL DEPENDENT NEUROTRANSMITTER TRANSPORTERS | Genes involved in Na+/Cl- dependent neurotransmitter transporters |
0.1 | 0.5 | REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS | Genes involved in Presynaptic nicotinic acetylcholine receptors |
0.0 | 0.5 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
0.0 | 0.4 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.0 | 0.4 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |