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PRJEB1986: zebrafish developmental stages transcriptome

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Results for nfixa+nfixb

Z-value: 0.85

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Transcription factors associated with nfixa+nfixb

Gene Symbol Gene ID Gene Info
nfixa
ENSDARG00000043226 nuclear factor I/Xa
nfixb
ENSDARG00000061836 nuclear factor I/Xb

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
nfixadr11_v1_chr1_+_51896147_51896147-0.321.9e-01Click!
nfixbdr11_v1_chr3_+_14768364_14768364-0.292.4e-01Click!

Activity profile of nfixa+nfixb motif

Sorted Z-values of nfixa+nfixb motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr1_-_33645967 1.93 ENSDART00000192758
cldng
claudin g
chr18_+_618005 1.88 ENSDART00000189667
prtga
protogenin homolog a (Gallus gallus)
chr11_-_11575070 1.58 ENSDART00000142208
zgc:110712
zgc:110712
chr8_-_22965214 1.28 ENSDART00000148178
emilin3a
elastin microfibril interfacer 3a
chr3_+_49021079 1.27 ENSDART00000162012
zgc:163083
zgc:163083
chr12_-_16595177 1.16 ENSDART00000133962
si:dkey-239j18.2
si:dkey-239j18.2
chr19_+_25465025 1.03 ENSDART00000018553
rpa3
replication protein A3
chr4_+_25680480 1.03 ENSDART00000100737
acot17
acyl-CoA thioesterase 17
chr3_-_24681404 1.02 ENSDART00000161612
BX569789.1

chr6_-_27108844 1.00 ENSDART00000073883
dtymk
deoxythymidylate kinase (thymidylate kinase)
chr22_+_9918872 0.94 ENSDART00000177953
blf
bloody fingers
chr2_-_14798295 0.93 ENSDART00000143430
ENSDART00000145869
si:ch73-366i20.1
si:ch73-366i20.1
chr5_+_26121393 0.92 ENSDART00000002221
bco2l
beta-carotene 15, 15-dioxygenase 2, like
chr2_-_14793343 0.91 ENSDART00000132264
si:ch73-366i20.1
si:ch73-366i20.1
chr4_+_72235562 0.89 ENSDART00000168547
si:cabz01071912.2
si:cabz01071912.2
chr13_-_33683889 0.89 ENSDART00000136820
ENSDART00000065435
cst3
cystatin C (amyloid angiopathy and cerebral hemorrhage)
chr15_-_18361475 0.87 ENSDART00000155866
zbtb16b
zinc finger and BTB domain containing 16b
chr11_+_14333441 0.85 ENSDART00000171969
ptbp1b
polypyrimidine tract binding protein 1b
chr23_+_19790962 0.82 ENSDART00000142228
flna
filamin A, alpha (actin binding protein 280)
chr14_-_9277152 0.82 ENSDART00000189048
asb12b
ankyrin repeat and SOCS box-containing 12b
chr9_+_15890558 0.81 ENSDART00000144032
si:dkey-14o1.20
si:dkey-14o1.20
chr18_+_20468157 0.79 ENSDART00000100665
ENSDART00000147867
ENSDART00000060302
ENSDART00000180370
ddb2
damage-specific DNA binding protein 2
chr3_-_22228602 0.78 ENSDART00000017750
myl4
myosin, light chain 4, alkali; atrial, embryonic
chr22_-_15602760 0.78 ENSDART00000009054
tpm4a
tropomyosin 4a
chr13_+_18321140 0.76 ENSDART00000180947
eif4e1c
eukaryotic translation initiation factor 4E family member 1c
chr21_-_36619599 0.76 ENSDART00000065208
nop16
NOP16 nucleolar protein homolog (yeast)
chr1_-_999556 0.75 ENSDART00000170884
ENSDART00000172235
gart
phosphoribosylglycinamide formyltransferase
chr16_+_23960933 0.74 ENSDART00000146077
apoeb
apolipoprotein Eb
chr20_-_47188966 0.72 ENSDART00000152965
si:dkeyp-104f11.9
si:dkeyp-104f11.9
chr22_-_15602593 0.68 ENSDART00000036075
tpm4a
tropomyosin 4a
chr7_+_12835048 0.67 ENSDART00000016465
cx36.7
connexin 36.7
chr7_-_30174882 0.67 ENSDART00000110409
frmd5
FERM domain containing 5
chr19_+_17642356 0.67 ENSDART00000176431
CR382334.1

chr11_-_20956309 0.67 ENSDART00000188659
CABZ01008739.1

chr21_+_19858627 0.64 ENSDART00000147010
fybb
FYN binding protein b
chr21_-_2958422 0.64 ENSDART00000174091
zgc:194215
zgc:194215
chr5_+_53482597 0.62 ENSDART00000180333
BX323994.1

chr4_+_51347000 0.61 ENSDART00000161859
si:dkeyp-82b4.3
si:dkeyp-82b4.3
chr16_-_39131666 0.61 ENSDART00000075517
gdf6a
growth differentiation factor 6a
chr12_+_27068525 0.61 ENSDART00000188634
srcap
Snf2-related CREBBP activator protein
chr13_+_15682803 0.60 ENSDART00000188063
CR931980.1

chr6_+_32834760 0.59 ENSDART00000121562
cyldl
cylindromatosis (turban tumor syndrome), like
chr14_+_6954579 0.57 ENSDART00000060998
nme5
NME/NM23 family member 5
chr1_+_47178529 0.56 ENSDART00000158432
ENSDART00000074450
ENSDART00000137448
morc3b
MORC family CW-type zinc finger 3b
chr3_-_58644920 0.55 ENSDART00000155953
dhrs7ca
dehydrogenase/reductase (SDR family) member 7Ca
chr16_+_23961276 0.55 ENSDART00000192754
apoeb
apolipoprotein Eb
chr7_+_21917857 0.53 ENSDART00000088041
ufsp1
UFM1-specific peptidase 1 (non-functional)
chr16_-_13595027 0.52 ENSDART00000060004
ntd5
ntl-dependent gene 5
chr3_-_32541033 0.52 ENSDART00000151476
ENSDART00000055324
rcn3
reticulocalbin 3, EF-hand calcium binding domain
chr16_+_27444098 0.51 ENSDART00000157690
invs
inversin
chr7_+_23943597 0.51 ENSDART00000157408
si:dkey-183c6.7
si:dkey-183c6.7
chr14_+_11458044 0.51 ENSDART00000186425
si:ch211-153b23.5
si:ch211-153b23.5
chr4_-_8030583 0.50 ENSDART00000113628
si:ch211-240l19.8
si:ch211-240l19.8
chr3_-_32603191 0.50 ENSDART00000150997
si:ch73-248e21.7
si:ch73-248e21.7
chr19_-_25464291 0.50 ENSDART00000112915
umad1
UBAP1-MVB12-associated (UMA) domain containing 1
chr14_+_11457500 0.49 ENSDART00000169202
si:ch211-153b23.5
si:ch211-153b23.5
chr13_+_21676235 0.49 ENSDART00000137804
ENSDART00000134950
ENSDART00000129653
mtg1
mitochondrial ribosome-associated GTPase 1
chr6_-_49078263 0.49 ENSDART00000032982
slc5a8l
solute carrier family 5 (iodide transporter), member 8-like
chr15_-_29388012 0.49 ENSDART00000115032
serpinh1b
serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b
chr21_-_31207522 0.49 ENSDART00000191637
zgc:152891
zgc:152891
chr4_+_70556298 0.48 ENSDART00000170985
si:dkey-11d20.1
si:dkey-11d20.1
chr8_+_21159122 0.47 ENSDART00000033491
spryd4
SPRY domain containing 4
chr16_-_26727032 0.46 ENSDART00000177668
rnf41l
ring finger protein 41, like
chr3_+_31600593 0.46 ENSDART00000076640
ENSDART00000148189
ccdc43
coiled-coil domain containing 43
chr6_-_24301324 0.45 ENSDART00000171401
BX927081.1

chr9_+_21993092 0.45 ENSDART00000059693
crygm7
crystallin, gamma M7
chr23_+_36616717 0.45 ENSDART00000042701
ENSDART00000192980
pip4k2ca
phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a
chr22_+_5478353 0.45 ENSDART00000160596
tppp
tubulin polymerization promoting protein
chr13_+_21677767 0.44 ENSDART00000165166
mtg1
mitochondrial ribosome-associated GTPase 1
chr5_+_57328535 0.44 ENSDART00000149646
slc31a1
solute carrier family 31 (copper transporter), member 1
chr15_-_29387446 0.43 ENSDART00000145976
ENSDART00000035096
serpinh1b
serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b
chr9_-_28937880 0.43 ENSDART00000132878
epb41l5
erythrocyte membrane protein band 4.1 like 5
chr6_-_35052145 0.43 ENSDART00000073970
ENSDART00000185790
uap1
UDP-N-acetylglucosamine pyrophosphorylase 1
chr3_+_34988670 0.43 ENSDART00000011319
smarce1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
chr20_+_25581627 0.43 ENSDART00000030229
cyp2p9
cytochrome P450, family 2, subfamily P, polypeptide 9
chr5_-_24517768 0.42 ENSDART00000003957
tia1l
cytotoxic granule-associated RNA binding protein 1, like
chr14_+_28438947 0.42 ENSDART00000006489
acsl4a
acyl-CoA synthetase long chain family member 4a
chr24_+_15655233 0.42 ENSDART00000143160
fbxo15
F-box protein 15
chr12_-_37941733 0.42 ENSDART00000130167
CABZ01046949.1

chr23_-_26880623 0.41 ENSDART00000038491
adcy6b
adenylate cyclase 6b
chr8_-_20138054 0.41 ENSDART00000133141
ENSDART00000147634
ENSDART00000029939
rfx2
regulatory factor X, 2 (influences HLA class II expression)
chr24_+_14527935 0.41 ENSDART00000134846
si:dkeyp-73g8.5
si:dkeyp-73g8.5
chr8_+_46536893 0.40 ENSDART00000124023
pimr187
Pim proto-oncogene, serine/threonine kinase, related 187
chr1_-_22851481 0.40 ENSDART00000054386
qdprb1
quinoid dihydropteridine reductase b1
chr2_+_15069011 0.40 ENSDART00000145893
cnn3b
calponin 3, acidic b
chr23_-_20361971 0.39 ENSDART00000133373
si:rp71-17i16.5
si:rp71-17i16.5
chr14_-_21064199 0.39 ENSDART00000172099
si:dkey-74k8.3
si:dkey-74k8.3
chr9_+_16449398 0.39 ENSDART00000006787
epha3
eph receptor A3
chr17_-_25563847 0.39 ENSDART00000040032
rtn4ip1
reticulon 4 interacting protein 1
chr16_+_48682309 0.38 ENSDART00000183957
tap1
transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
chr22_+_10163901 0.38 ENSDART00000190468
rpp14
ribonuclease P/MRP 14 subunit
chr16_+_38394371 0.38 ENSDART00000137954
cd83
CD83 molecule
chr14_+_18785727 0.37 ENSDART00000184452
si:ch211-111e20.1
si:ch211-111e20.1
chr17_-_27223965 0.37 ENSDART00000192577
asap3
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
chr21_-_21465111 0.36 ENSDART00000141487
nectin3b
nectin cell adhesion molecule 3b
chr19_-_42556086 0.35 ENSDART00000051731
si:dkey-267n13.1
si:dkey-267n13.1
chr25_+_16079913 0.35 ENSDART00000146350
far1
fatty acyl CoA reductase 1
chr23_+_5524247 0.35 ENSDART00000189679
ENSDART00000083622
tead3a
TEA domain family member 3 a
chr9_-_39968820 0.34 ENSDART00000100311
IKZF2
si:zfos-1425h8.1
chr14_-_24101897 0.34 ENSDART00000143695
cpeb4a
cytoplasmic polyadenylation element binding protein 4a
chr9_+_6587364 0.34 ENSDART00000122279
fhl2a
four and a half LIM domains 2a
chr7_+_57108823 0.33 ENSDART00000184943
ENSDART00000055956
enosf1
enolase superfamily member 1
chr2_-_37477654 0.33 ENSDART00000193921
dapk3
death-associated protein kinase 3
chr8_-_52715911 0.33 ENSDART00000168241
tubb2b
tubulin, beta 2b
chr9_+_24126223 0.33 ENSDART00000132045
pgap1
post-GPI attachment to proteins 1
chr13_+_30804367 0.32 ENSDART00000053946
cxcl12a
chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
chr2_-_37889111 0.32 ENSDART00000168939
ENSDART00000098529
mbl2
mannose binding lectin 2
chr18_+_26750516 0.32 ENSDART00000110843
alpk3a
alpha-kinase 3a
chr11_-_24016761 0.32 ENSDART00000153601
ENSDART00000067817
ENSDART00000170531
chia.3
chitinase, acidic.3
chr3_-_61375496 0.32 ENSDART00000165188
si:dkey-111k8.2
si:dkey-111k8.2
chr9_+_9927516 0.31 ENSDART00000161089
ENSDART00000168559
ttf2
transcription termination factor, RNA polymerase II
chr15_-_28082310 0.31 ENSDART00000152620
dhrs13a.3
dehydrogenase/reductase (SDR family) member 13a, duplicate 3
chr2_+_394166 0.31 ENSDART00000155733
mylk4a
myosin light chain kinase family, member 4a
chr8_+_27555314 0.31 ENSDART00000135568
ENSDART00000016696
rhocb
ras homolog family member Cb
chr1_+_51191049 0.30 ENSDART00000132244
ENSDART00000014970
ENSDART00000132141
btbd3a
BTB (POZ) domain containing 3a
chr7_-_39751540 0.30 ENSDART00000016803
grpel1
GrpE-like 1, mitochondrial
chr5_+_37087583 0.30 ENSDART00000049900
tagln2
transgelin 2
chr7_+_59649399 0.29 ENSDART00000123520
ENSDART00000040771
rpl34
ribosomal protein L34
chr7_-_72382122 0.29 ENSDART00000191418
CU459012.3

chr18_-_40481028 0.29 ENSDART00000134177
zgc:101040
zgc:101040
chr2_+_19195841 0.29 ENSDART00000163137
ENSDART00000161095
elovl1a
ELOVL fatty acid elongase 1a
chr4_+_31456734 0.29 ENSDART00000140176
znf996
zinc finger protein 996
chr13_+_39297802 0.28 ENSDART00000133636
si:dkey-85a20.4
si:dkey-85a20.4
chr17_+_7595356 0.28 ENSDART00000130625
si:dkeyp-110a12.4
si:dkeyp-110a12.4
chr22_+_9522971 0.28 ENSDART00000110048
strip1
striatin interacting protein 1
chr19_-_24443867 0.28 ENSDART00000163763
ENSDART00000043133
thbs3b
thrombospondin 3b
chr13_+_18545819 0.28 ENSDART00000101859
ENSDART00000110197
ENSDART00000136064
zgc:154058
zgc:154058
chr25_-_27729046 0.28 ENSDART00000131437
zgc:153935
zgc:153935
chr17_-_14451405 0.27 ENSDART00000146786
jkamp
jnk1/mapk8 associated membrane protein
chr8_-_31416403 0.26 ENSDART00000098912
znf131
zinc finger protein 131
chr12_-_36260532 0.26 ENSDART00000022533
kcnj2a
potassium inwardly-rectifying channel, subfamily J, member 2a
chr17_+_25563979 0.26 ENSDART00000045615
ENSDART00000183162
qrsl1
glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
chr17_+_6382275 0.26 ENSDART00000056324
CR628323.2

chr8_+_28469054 0.26 ENSDART00000062716
slc52a3
solute carrier family 52 (riboflavin transporter), member 3
chr2_-_11648731 0.25 ENSDART00000080925
impad1
inositol monophosphatase domain containing 1
chr2_+_9536021 0.25 ENSDART00000187357
CU929379.1

chr3_+_43955864 0.25 ENSDART00000168267
BX571715.1

chr23_-_25135046 0.25 ENSDART00000184844
ENSDART00000103989
idh3g
isocitrate dehydrogenase 3 (NAD+) gamma
chr13_-_27384697 0.25 ENSDART00000146230
kcnq5a
potassium voltage-gated channel, KQT-like subfamily, member 5a
chr10_+_39263827 0.25 ENSDART00000172509
foxred1
FAD-dependent oxidoreductase domain containing 1
chr11_-_22372072 0.25 ENSDART00000065996
tmem183a
transmembrane protein 183A
chr5_+_53009083 0.25 ENSDART00000157836
hint2
histidine triad nucleotide binding protein 2
chr23_+_21414005 0.25 ENSDART00000144686
iffo2a
intermediate filament family orphan 2a
chr5_-_15264007 0.24 ENSDART00000180641
gnb1l
guanine nucleotide binding protein (G protein), beta polypeptide 1-like
chr19_+_30990815 0.24 ENSDART00000134645
sync
syncoilin, intermediate filament protein
chr2_+_40294313 0.23 ENSDART00000037292
epha4b
eph receptor A4b
chr3_-_8130926 0.23 ENSDART00000189495
si:ch211-51i16.1
si:ch211-51i16.1
chr6_+_40437987 0.23 ENSDART00000136487
ghrl
ghrelin/obestatin prepropeptide
chr23_+_28381260 0.23 ENSDART00000162722
zgc:153867
zgc:153867
chr3_-_40976288 0.23 ENSDART00000193553
cyp3c1
cytochrome P450, family 3, subfamily c, polypeptide 1
chr22_+_25184459 0.23 ENSDART00000105308
si:ch211-226h8.4
si:ch211-226h8.4
chr19_+_10603405 0.22 ENSDART00000151135
si:dkey-211g8.8
si:dkey-211g8.8
chr2_-_2642476 0.22 ENSDART00000124032
serbp1b
SERPINE1 mRNA binding protein 1b
chr24_+_21174851 0.22 ENSDART00000154940
ENSDART00000155977
ENSDART00000122762
naa50
N(alpha)-acetyltransferase 50, NatE catalytic subunit
chr23_+_12852655 0.22 ENSDART00000183015
smc1al
structural maintenance of chromosomes 1A, like
chr1_-_54706039 0.22 ENSDART00000083633
exosc1
exosome component 1
chr5_-_10239079 0.22 ENSDART00000132739
si:ch73-42k18.1
si:ch73-42k18.1
chr19_+_10831362 0.22 ENSDART00000053325
tomm40l
translocase of outer mitochondrial membrane 40 homolog, like
chr12_+_26632448 0.22 ENSDART00000185762
arhgap12b
Rho GTPase activating protein 12b
chr2_+_16191852 0.21 ENSDART00000152046
sh3glb1b
SH3-domain GRB2-like endophilin B1b
chr7_+_59212666 0.21 ENSDART00000172046
dok1b
docking protein 1b
chr23_+_22293682 0.21 ENSDART00000187304
CR354612.1

chr11_-_3629201 0.20 ENSDART00000136577
ENSDART00000132121
itih3a
inter-alpha-trypsin inhibitor heavy chain 3a
chr15_+_38308421 0.19 ENSDART00000129941
si:dkey-24p1.6
si:dkey-24p1.6
chr17_+_50701748 0.19 ENSDART00000191938
ENSDART00000183220
ENSDART00000049464
fermt2
fermitin family member 2
chr14_+_22076596 0.19 ENSDART00000106147
ENSDART00000100278
ENSDART00000131489
slc43a1a
solute carrier family 43 (amino acid system L transporter), member 1a
chr3_-_29891456 0.18 ENSDART00000151677
ENSDART00000014021
slc25a39
solute carrier family 25, member 39
chr17_-_48743076 0.18 ENSDART00000173117
kcnk17
potassium channel, subfamily K, member 17
chr16_-_55028740 0.18 ENSDART00000156368
ENSDART00000161704
zgc:114181
zgc:114181
chr9_+_32428679 0.18 ENSDART00000187650
ENSDART00000190472
plcl1
phospholipase C like 1
chr17_+_14784275 0.18 ENSDART00000005355
rtraf
RNA transcription, translation and transport factor
chr6_-_1587291 0.18 ENSDART00000067592
ENSDART00000178877
zgc:123305
zgc:123305
chr16_-_28876479 0.18 ENSDART00000047862
si:dkey-239n17.4
si:dkey-239n17.4
chr10_-_17745345 0.18 ENSDART00000132690
ENSDART00000135376
si:dkey-200l5.4
si:dkey-200l5.4
chr23_+_24989387 0.18 ENSDART00000172299
ENSDART00000145307
arhgap4a
Rho GTPase activating protein 4a
chr16_-_49846359 0.18 ENSDART00000184246
znf385d
zinc finger protein 385D
chr9_-_2572790 0.18 ENSDART00000135076
ENSDART00000016710
scrn3
secernin 3
chr21_-_11632403 0.18 ENSDART00000171708
ENSDART00000138619
ENSDART00000136308
ENSDART00000144770
cast
calpastatin
chr14_-_25444774 0.17 ENSDART00000183448
slc26a2
solute carrier family 26 (anion exchanger), member 2
chr3_-_16010968 0.17 ENSDART00000080672
mrps34
mitochondrial ribosomal protein S34
chr5_+_57641554 0.17 ENSDART00000171309
ENSDART00000157992
ENSDART00000164742
cryabb
crystallin, alpha B, b
chr1_+_22851261 0.17 ENSDART00000193925
gtf2e2
general transcription factor IIE, polypeptide 2, beta
chr6_+_8630355 0.17 ENSDART00000161749
ENSDART00000193976
tspeara
thrombospondin-type laminin G domain and EAR repeats a
chr7_-_21928826 0.16 ENSDART00000088043
si:dkey-85k7.11
si:dkey-85k7.11
chr12_+_30723778 0.16 ENSDART00000153291
slc35f3a
solute carrier family 35, member F3a
chr20_+_48543492 0.16 ENSDART00000175480
LO018254.1

chr18_-_33093705 0.16 ENSDART00000059500
olfcd3
olfactory receptor C family, d3
chr6_-_12135741 0.16 ENSDART00000155090
tanc1a
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1a
chr22_+_5176255 0.16 ENSDART00000092647
cers1
ceramide synthase 1
chr4_-_35900331 0.16 ENSDART00000164413
zgc:174653
zgc:174653
chr24_+_26432541 0.16 ENSDART00000105784
ENSDART00000122554
cldn11b
claudin 11b
chr13_-_9024004 0.16 ENSDART00000169564
si:dkey-112g5.11
si:dkey-112g5.11
chr3_-_39198113 0.15 ENSDART00000102690
RETSAT
zgc:154169
chr22_+_12477996 0.15 ENSDART00000177704
CR847870.3

chr22_+_34663328 0.15 ENSDART00000183912
si:ch73-304f21.1
si:ch73-304f21.1
chr13_-_9895564 0.15 ENSDART00000169831
ENSDART00000142629
si:ch211-117n7.6
si:ch211-117n7.6
chr22_-_11729350 0.15 ENSDART00000105813
krt222
keratin 222
chr20_+_23960525 0.15 ENSDART00000042123
cx52.6
connexin 52.6
chr3_-_26921475 0.14 ENSDART00000130281
ciita
class II, major histocompatibility complex, transactivator
chr19_-_12404590 0.14 ENSDART00000103703
ftr56
finTRIM family, member 56

Network of associatons between targets according to the STRING database.

First level regulatory network of nfixa+nfixb

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.5 GO:1902176 regulation of oxidative stress-induced intrinsic apoptotic signaling pathway(GO:1902175) negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway(GO:1902176)
0.4 1.3 GO:0071830 chylomicron remnant clearance(GO:0034382) triglyceride-rich lipoprotein particle clearance(GO:0071830) intermediate-density lipoprotein particle clearance(GO:0071831)
0.4 1.9 GO:0016338 calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules(GO:0016338)
0.3 1.0 GO:0009211 pyrimidine deoxyribonucleoside triphosphate metabolic process(GO:0009211)
0.2 0.5 GO:0071918 urea transmembrane transport(GO:0071918)
0.2 0.6 GO:0042671 retinal cone cell fate determination(GO:0042671) eye photoreceptor cell fate commitment(GO:0042706) photoreceptor cell fate determination(GO:0043703) retinal cone cell fate commitment(GO:0046551) photoreceptor cell fate commitment(GO:0046552) camera-type eye photoreceptor cell fate commitment(GO:0060220)
0.1 0.7 GO:0046083 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.1 0.4 GO:0007509 mesoderm migration involved in gastrulation(GO:0007509)
0.1 0.5 GO:0072116 kidney rudiment formation(GO:0072003) pronephros formation(GO:0072116)
0.1 0.4 GO:0002468 dendritic cell antigen processing and presentation(GO:0002468)
0.1 0.3 GO:0006505 GPI anchor metabolic process(GO:0006505)
0.1 0.3 GO:2000471 regulation of hematopoietic stem cell migration(GO:2000471)
0.1 0.4 GO:0019884 antigen processing and presentation of exogenous peptide antigen(GO:0002478) antigen processing and presentation of exogenous antigen(GO:0019884) antigen processing and presentation of exogenous peptide antigen via MHC class I(GO:0042590)
0.1 0.4 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.1 0.4 GO:0071480 response to gamma radiation(GO:0010332) cellular response to gamma radiation(GO:0071480)
0.1 0.4 GO:1900744 regulation of p38MAPK cascade(GO:1900744)
0.1 0.8 GO:0032481 positive regulation of type I interferon production(GO:0032481)
0.1 0.4 GO:0003160 endocardium morphogenesis(GO:0003160)
0.1 0.2 GO:0071962 establishment of mitotic sister chromatid cohesion(GO:0034087) mitotic sister chromatid cohesion, centromeric(GO:0071962)
0.1 0.4 GO:0021550 medulla oblongata development(GO:0021550) dorsal motor nucleus of vagus nerve development(GO:0021744)
0.0 1.5 GO:0055003 cardiac myofibril assembly(GO:0055003)
0.0 0.3 GO:0002931 response to ischemia(GO:0002931)
0.0 0.1 GO:0031293 membrane protein intracellular domain proteolysis(GO:0031293)
0.0 1.3 GO:0048570 notochord morphogenesis(GO:0048570)
0.0 0.3 GO:1902766 skeletal muscle satellite cell migration(GO:1902766)
0.0 0.3 GO:0032218 riboflavin transport(GO:0032218)
0.0 0.1 GO:0010430 fatty acid omega-oxidation(GO:0010430)
0.0 0.9 GO:0006298 mismatch repair(GO:0006298)
0.0 0.4 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.0 0.2 GO:0006102 isocitrate metabolic process(GO:0006102)
0.0 0.1 GO:0018343 protein farnesylation(GO:0018343)
0.0 0.2 GO:0070571 negative regulation of axon regeneration(GO:0048681) negative regulation of neuron projection regeneration(GO:0070571)
0.0 0.5 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 0.3 GO:0006032 chitin catabolic process(GO:0006032)
0.0 0.8 GO:0009411 response to UV(GO:0009411)
0.0 0.3 GO:0019372 lipoxygenase pathway(GO:0019372) linoleic acid metabolic process(GO:0043651) hepoxilin metabolic process(GO:0051121) hepoxilin biosynthetic process(GO:0051122)
0.0 0.1 GO:0030205 dermatan sulfate metabolic process(GO:0030205)
0.0 0.6 GO:0043486 histone exchange(GO:0043486)
0.0 0.2 GO:0097341 inhibition of cysteine-type endopeptidase activity(GO:0097340) zymogen inhibition(GO:0097341)
0.0 0.1 GO:0034551 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.0 0.1 GO:0051876 pigment granule dispersal(GO:0051876)
0.0 0.2 GO:0018120 peptidyl-arginine ADP-ribosylation(GO:0018120)
0.0 0.2 GO:0032095 regulation of response to food(GO:0032095)
0.0 0.4 GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process(GO:0036092)
0.0 0.2 GO:0032228 regulation of synaptic transmission, GABAergic(GO:0032228)
0.0 0.6 GO:0070536 protein K63-linked deubiquitination(GO:0070536)
0.0 0.1 GO:1902093 positive regulation of sperm motility(GO:1902093)
0.0 0.1 GO:0046462 phosphatidylserine catabolic process(GO:0006660) monoacylglycerol metabolic process(GO:0046462) monoacylglycerol catabolic process(GO:0052651)
0.0 0.1 GO:0019284 L-methionine biosynthetic process from S-adenosylmethionine(GO:0019284)
0.0 0.2 GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.0 0.7 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.0 0.3 GO:0042574 retinal metabolic process(GO:0042574)
0.0 1.1 GO:0006637 acyl-CoA metabolic process(GO:0006637) thioester metabolic process(GO:0035383)
0.0 0.4 GO:0022011 myelination in peripheral nervous system(GO:0022011)
0.0 0.1 GO:0000706 meiotic DNA double-strand break processing(GO:0000706)
0.0 0.3 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.0 0.4 GO:0048515 spermatid development(GO:0007286) spermatid differentiation(GO:0048515)
0.0 0.1 GO:0010735 positive regulation of transcription via serum response element binding(GO:0010735)
0.0 0.1 GO:0001958 endochondral ossification(GO:0001958) replacement ossification(GO:0036075)
0.0 0.1 GO:0071379 cellular response to prostaglandin stimulus(GO:0071379)
0.0 0.7 GO:0050852 T cell receptor signaling pathway(GO:0050852)
0.0 0.4 GO:0032543 mitochondrial translation(GO:0032543)
0.0 0.2 GO:0010257 NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.7 GO:0010842 retina layer formation(GO:0010842)
0.0 0.4 GO:0035329 hippo signaling(GO:0035329)
0.0 0.5 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.3 GO:0034363 intermediate-density lipoprotein particle(GO:0034363)
0.1 1.0 GO:0005662 DNA replication factor A complex(GO:0005662)
0.1 0.4 GO:0042824 MHC class I peptide loading complex(GO:0042824)
0.1 0.3 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.1 0.6 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.2 GO:0031415 NatA complex(GO:0031415)
0.0 0.4 GO:0005943 phosphatidylinositol 3-kinase complex, class IA(GO:0005943)
0.0 0.8 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.2 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.0 0.2 GO:0031258 lamellipodium membrane(GO:0031258)
0.0 0.1 GO:0005965 protein farnesyltransferase complex(GO:0005965)
0.0 0.8 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.3 GO:0030893 meiotic cohesin complex(GO:0030893)
0.0 0.1 GO:0098576 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.0 0.1 GO:0016234 inclusion body(GO:0016234)
0.0 0.3 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.0 0.2 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 2.9 GO:0043296 apical junction complex(GO:0043296)
0.0 0.1 GO:0071012 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.0 0.1 GO:0097225 sperm midpiece(GO:0097225)
0.0 0.1 GO:0072669 tRNA-splicing ligase complex(GO:0072669)
0.0 0.4 GO:0019814 immunoglobulin complex(GO:0019814)
0.0 1.5 GO:0005884 actin filament(GO:0005884)
0.0 0.4 GO:0016514 SWI/SNF complex(GO:0016514)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.3 GO:0043395 heparan sulfate proteoglycan binding(GO:0043395)
0.3 1.0 GO:0009041 uridylate kinase activity(GO:0009041)
0.2 0.5 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 0.5 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 0.9 GO:0003834 beta-carotene 15,15'-monooxygenase activity(GO:0003834) carotenoid dioxygenase activity(GO:0010436)
0.1 0.4 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.1 0.4 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.1 0.7 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.1 0.4 GO:0015440 peptide antigen-transporting ATPase activity(GO:0015433) peptide-transporting ATPase activity(GO:0015440) TAP binding(GO:0046977)
0.1 0.6 GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.1 0.2 GO:0005252 open rectifier potassium channel activity(GO:0005252)
0.1 0.4 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.2 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.0 0.3 GO:0004060 arylamine N-acetyltransferase activity(GO:0004060)
0.0 0.4 GO:0016922 ligand-dependent nuclear receptor binding(GO:0016922)
0.0 0.8 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 1.1 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.5 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.0 1.8 GO:0003684 damaged DNA binding(GO:0003684)
0.0 0.2 GO:0015355 secondary active monocarboxylate transmembrane transporter activity(GO:0015355)
0.0 0.3 GO:0032217 riboflavin transporter activity(GO:0032217)
0.0 0.4 GO:0047676 arachidonate-CoA ligase activity(GO:0047676)
0.0 0.6 GO:0061578 Lys63-specific deubiquitinase activity(GO:0061578)
0.0 0.6 GO:0005005 transmembrane-ephrin receptor activity(GO:0005005)
0.0 0.4 GO:0016805 dipeptidase activity(GO:0016805)
0.0 0.4 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.3 GO:0052650 NADP-retinol dehydrogenase activity(GO:0052650)
0.0 0.3 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.1 GO:0004660 protein farnesyltransferase activity(GO:0004660)
0.0 0.3 GO:0004568 chitinase activity(GO:0004568)
0.0 0.1 GO:0047757 chondroitin-glucuronate 5-epimerase activity(GO:0047757)
0.0 0.2 GO:0010859 calcium-dependent cysteine-type endopeptidase inhibitor activity(GO:0010859)
0.0 0.9 GO:0005518 collagen binding(GO:0005518)
0.0 0.3 GO:0000900 translation repressor activity, nucleic acid binding(GO:0000900)
0.0 0.3 GO:0004687 myosin light chain kinase activity(GO:0004687)
0.0 0.2 GO:0016530 metallochaperone activity(GO:0016530)
0.0 0.2 GO:0010485 H4 histone acetyltransferase activity(GO:0010485)
0.0 0.6 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 0.4 GO:0035005 1-phosphatidylinositol-4-phosphate 3-kinase activity(GO:0035005)
0.0 0.2 GO:0003956 NAD(P)+-protein-arginine ADP-ribosyltransferase activity(GO:0003956)
0.0 0.1 GO:0004995 tachykinin receptor activity(GO:0004995)
0.0 0.3 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.3 GO:0042056 chemoattractant activity(GO:0042056)
0.0 0.3 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.0 0.1 GO:0030169 low-density lipoprotein particle binding(GO:0030169)
0.0 0.4 GO:0004016 adenylate cyclase activity(GO:0004016)
0.0 0.3 GO:0102336 fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.2 GO:0008320 protein transmembrane transporter activity(GO:0008320)
0.0 0.1 GO:0043914 NADPH:sulfur oxidoreductase activity(GO:0043914)
0.0 0.1 GO:0017070 U6 snRNA binding(GO:0017070)
0.0 0.1 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.1 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 0.7 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712)
0.0 2.3 GO:0042802 identical protein binding(GO:0042802)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.8 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton
0.0 0.4 PID ERB GENOMIC PATHWAY Validated nuclear estrogen receptor beta network
0.0 1.0 ST T CELL SIGNAL TRANSDUCTION T Cell Signal Transduction
0.0 0.4 PID EPHA FWDPATHWAY EPHA forward signaling
0.0 0.1 SA FAS SIGNALING The TNF-type receptor Fas induces apoptosis on ligand binding.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.0 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.1 0.7 REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS Genes involved in Purine ribonucleoside monophosphate biosynthesis
0.0 1.0 REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates
0.0 0.9 REACTOME AMYLOIDS Genes involved in Amyloids
0.0 0.8 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.0 0.3 REACTOME ROLE OF DCC IN REGULATING APOPTOSIS Genes involved in Role of DCC in regulating apoptosis
0.0 0.3 REACTOME CREATION OF C4 AND C2 ACTIVATORS Genes involved in Creation of C4 and C2 activators
0.0 0.8 REACTOME STRIATED MUSCLE CONTRACTION Genes involved in Striated Muscle Contraction
0.0 0.4 REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC
0.0 0.2 REACTOME SYNTHESIS SECRETION AND DEACYLATION OF GHRELIN Genes involved in Synthesis, Secretion, and Deacylation of Ghrelin
0.0 0.3 REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY Genes involved in Post-chaperonin tubulin folding pathway
0.0 0.4 REACTOME METAL ION SLC TRANSPORTERS Genes involved in Metal ion SLC transporters
0.0 0.2 REACTOME MRNA DECAY BY 3 TO 5 EXORIBONUCLEASE Genes involved in mRNA Decay by 3' to 5' Exoribonuclease
0.0 0.4 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.0 0.2 REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS Genes involved in Cell-extracellular matrix interactions
0.0 0.2 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.0 0.3 REACTOME POST TRANSLATIONAL MODIFICATION SYNTHESIS OF GPI ANCHORED PROTEINS Genes involved in Post-translational modification: synthesis of GPI-anchored proteins