PRJEB1986: zebrafish developmental stages transcriptome
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr22_+_724639 Show fit | 2.92 |
ENSDART00000105323
|
zgc:162255 |
|
chr19_-_35155722 Show fit | 2.10 |
ENSDART00000151924
|
microtubule-actin crosslinking factor 1a |
|
chr2_+_55916911 Show fit | 1.62 |
ENSDART00000189483
ENSDART00000183647 ENSDART00000083470 |
ataxia, cerebellar, Cayman type b |
|
chr24_-_33308045 Show fit | 1.57 |
ENSDART00000149711
|
solute carrier family 4 (anion exchanger), member 2b |
|
chr16_-_13612650 Show fit | 1.55 |
ENSDART00000080372
|
D site albumin promoter binding protein b |
|
chr23_+_36601984 Show fit | 1.50 |
ENSDART00000128598
|
insulin-like growth factor binding protein 6b |
|
chr25_+_28282274 Show fit | 1.49 |
ENSDART00000164502
|
aminoadipate-semialdehyde synthase |
|
chr2_+_39618951 Show fit | 1.48 |
ENSDART00000077108
|
zgc:136870 |
|
chr7_-_23777445 Show fit | 1.48 |
ENSDART00000173527
|
si:ch211-200p22.4 |
|
chr22_+_7480465 Show fit | 1.45 |
ENSDART00000034545
|
zgc:92745 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 2.9 | GO:0031063 | regulation of histone deacetylation(GO:0031063) |
0.2 | 2.6 | GO:0006798 | polyphosphate metabolic process(GO:0006797) polyphosphate catabolic process(GO:0006798) |
0.3 | 2.1 | GO:0060832 | oocyte animal/vegetal axis specification(GO:0060832) |
0.1 | 2.1 | GO:0015701 | bicarbonate transport(GO:0015701) |
0.0 | 1.6 | GO:0003351 | epithelial cilium movement(GO:0003351) |
0.5 | 1.5 | GO:0033512 | lysine biosynthetic process(GO:0009085) lysine biosynthetic process via aminoadipic acid(GO:0019878) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) |
0.1 | 1.5 | GO:0043567 | regulation of insulin-like growth factor receptor signaling pathway(GO:0043567) |
0.0 | 1.5 | GO:0016185 | synaptic vesicle budding from presynaptic endocytic zone membrane(GO:0016185) |
0.1 | 1.4 | GO:0048769 | sarcomerogenesis(GO:0048769) |
0.2 | 1.3 | GO:0006572 | tyrosine catabolic process(GO:0006572) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 2.1 | GO:0032019 | mitochondrial cloud(GO:0032019) |
0.0 | 2.1 | GO:0030496 | midbody(GO:0030496) |
0.0 | 2.1 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.0 | 1.6 | GO:0031902 | late endosome membrane(GO:0031902) |
0.1 | 1.5 | GO:0098894 | presynaptic endocytic zone(GO:0098833) presynaptic endocytic zone membrane(GO:0098835) extrinsic component of presynaptic membrane(GO:0098888) extrinsic component of presynaptic endocytic zone(GO:0098894) |
0.0 | 1.4 | GO:0005814 | centriole(GO:0005814) |
0.1 | 1.1 | GO:0000176 | nuclear exosome (RNase complex)(GO:0000176) |
0.1 | 1.0 | GO:0030285 | integral component of synaptic vesicle membrane(GO:0030285) intrinsic component of synaptic vesicle membrane(GO:0098563) |
0.0 | 0.8 | GO:0016010 | dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665) |
0.0 | 0.8 | GO:0000421 | autophagosome membrane(GO:0000421) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.6 | GO:0004309 | exopolyphosphatase activity(GO:0004309) |
0.1 | 2.1 | GO:0005452 | inorganic anion exchanger activity(GO:0005452) |
0.1 | 1.5 | GO:0031994 | insulin-like growth factor I binding(GO:0031994) insulin-like growth factor II binding(GO:0031995) |
0.1 | 1.5 | GO:0005545 | 1-phosphatidylinositol binding(GO:0005545) |
0.1 | 1.5 | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646) |
0.3 | 1.4 | GO:2001070 | starch binding(GO:2001070) |
0.0 | 1.4 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.4 | 1.3 | GO:0003868 | 4-hydroxyphenylpyruvate dioxygenase activity(GO:0003868) |
0.0 | 1.1 | GO:0032266 | phosphatidylinositol-3-phosphate binding(GO:0032266) |
0.1 | 1.0 | GO:0001965 | G-protein alpha-subunit binding(GO:0001965) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | ST PHOSPHOINOSITIDE 3 KINASE PATHWAY | PI3K Pathway |
0.0 | 1.0 | ST GA13 PATHWAY | G alpha 13 Pathway |
0.1 | 0.9 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
0.0 | 0.8 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.0 | 0.6 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.0 | 0.6 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
0.0 | 0.4 | PID LPA4 PATHWAY | LPA4-mediated signaling events |
0.0 | 0.3 | PID GLYPICAN 1PATHWAY | Glypican 1 network |
0.1 | 0.2 | SA TRKA RECEPTOR | The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth. |
0.0 | 0.2 | PID SYNDECAN 3 PATHWAY | Syndecan-3-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.3 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.1 | 1.1 | REACTOME MRNA DECAY BY 3 TO 5 EXORIBONUCLEASE | Genes involved in mRNA Decay by 3' to 5' Exoribonuclease |
0.0 | 1.1 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.1 | 1.0 | REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE | Genes involved in Sema4D induced cell migration and growth-cone collapse |
0.0 | 0.9 | REACTOME ERK MAPK TARGETS | Genes involved in ERK/MAPK targets |
0.0 | 0.8 | REACTOME N GLYCAN ANTENNAE ELONGATION IN THE MEDIAL TRANS GOLGI | Genes involved in N-glycan antennae elongation in the medial/trans-Golgi |
0.0 | 0.8 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.0 | 0.6 | REACTOME G1 PHASE | Genes involved in G1 Phase |
0.0 | 0.5 | REACTOME THE ACTIVATION OF ARYLSULFATASES | Genes involved in The activation of arylsulfatases |
0.0 | 0.4 | REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY | Genes involved in Adenylate cyclase activating pathway |