PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
pax8 | dr11_v1_chr5_-_72415578_72415578 | 0.39 | 9.6e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_+_25630555 Show fit | 1.58 |
ENSDART00000133425
|
acyl-CoA thioesterase 15 |
|
chr20_-_9436521 Show fit | 0.99 |
ENSDART00000133000
|
zgc:101840 |
|
chr16_+_23487051 Show fit | 0.92 |
ENSDART00000145496
|
ictacalcin 2 |
|
chr7_+_10610791 Show fit | 0.65 |
ENSDART00000166064
|
fumarylacetoacetate hydrolase (fumarylacetoacetase) |
|
chr25_-_7520937 Show fit | 0.64 |
ENSDART00000170050
|
cyclin-dependent kinase inhibitor 1Cb |
|
chr16_+_49601838 Show fit | 0.57 |
ENSDART00000168570
ENSDART00000159236 |
si:dkey-82o10.4 |
|
chr10_+_36037977 Show fit | 0.48 |
ENSDART00000164678
|
katanin p60 subunit A-like 1 |
|
chr22_-_25033105 Show fit | 0.47 |
ENSDART00000124220
|
neuronal pentraxin receptor b |
|
chr2_-_985417 Show fit | 0.47 |
ENSDART00000140540
|
si:ch211-241e1.3 |
|
chr24_-_25442342 Show fit | 0.47 |
ENSDART00000177140
ENSDART00000138215 |
phosphate regulating endopeptidase homolog, X-linked |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.9 | GO:0006637 | acyl-CoA metabolic process(GO:0006637) thioester metabolic process(GO:0035383) |
0.1 | 0.7 | GO:0097272 | ammonia homeostasis(GO:0097272) |
0.1 | 0.7 | GO:0006572 | tyrosine catabolic process(GO:0006572) |
0.1 | 0.6 | GO:0032979 | protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204) |
0.1 | 0.6 | GO:1904030 | negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030) |
0.1 | 0.5 | GO:0051013 | microtubule severing(GO:0051013) |
0.1 | 0.4 | GO:0035994 | response to muscle stretch(GO:0035994) |
0.0 | 0.4 | GO:0045661 | regulation of myoblast differentiation(GO:0045661) |
0.0 | 0.3 | GO:0070979 | protein K11-linked ubiquitination(GO:0070979) |
0.0 | 0.3 | GO:0045454 | cell redox homeostasis(GO:0045454) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.4 | GO:0016600 | flotillin complex(GO:0016600) |
0.0 | 0.3 | GO:0048179 | activin receptor complex(GO:0048179) |
0.1 | 0.2 | GO:0033391 | chromatoid body(GO:0033391) |
0.0 | 0.2 | GO:0000814 | ESCRT II complex(GO:0000814) |
0.0 | 0.2 | GO:0005672 | transcription factor TFIIA complex(GO:0005672) |
0.0 | 0.2 | GO:0032039 | integrator complex(GO:0032039) |
0.0 | 0.1 | GO:0034663 | endoplasmic reticulum chaperone complex(GO:0034663) |
0.0 | 0.1 | GO:0061700 | GATOR2 complex(GO:0061700) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.9 | GO:0016790 | thiolester hydrolase activity(GO:0016790) |
0.0 | 0.9 | GO:0048306 | calcium-dependent protein binding(GO:0048306) |
0.2 | 0.7 | GO:0004087 | carbamoyl-phosphate synthase (ammonia) activity(GO:0004087) |
0.1 | 0.7 | GO:0016823 | hydrolase activity, acting on acid carbon-carbon bonds(GO:0016822) hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances(GO:0016823) |
0.1 | 0.6 | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) |
0.1 | 0.6 | GO:0051920 | peroxiredoxin activity(GO:0051920) |
0.0 | 0.6 | GO:0043022 | ribosome binding(GO:0043022) |
0.0 | 0.5 | GO:0008568 | microtubule-severing ATPase activity(GO:0008568) |
0.1 | 0.4 | GO:0070004 | cysteine-type exopeptidase activity(GO:0070004) |
0.0 | 0.4 | GO:0008307 | structural constituent of muscle(GO:0008307) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | REACTOME PYRUVATE METABOLISM | Genes involved in Pyruvate metabolism |
0.0 | 0.2 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.0 | 0.1 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |