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PRJEB1986: zebrafish developmental stages transcriptome

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Results for phox2bb

Z-value: 0.23

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Transcription factors associated with phox2bb

Gene Symbol Gene ID Gene Info
phox2bb
ENSDARG00000091029 paired like homeobox 2Bb

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
phox2bbdr11_v1_chr14_-_17068712_170687120.787.8e-05Click!

Activity profile of phox2bb motif

Sorted Z-values of phox2bb motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr2_+_50608099 0.59 ENSDART00000185805
ENSDART00000111135
neurod6b
neuronal differentiation 6b
chr2_+_2223837 0.56 ENSDART00000101038
ENSDART00000129354
tmie
transmembrane inner ear
chr12_-_35054354 0.44 ENSDART00000075351
zgc:112285
zgc:112285
chr16_-_12173554 0.40 ENSDART00000110567
ENSDART00000155935
clstn3
calsyntenin 3
chr17_+_15433671 0.39 ENSDART00000149568
fabp7a
fatty acid binding protein 7, brain, a
chr17_+_15433518 0.35 ENSDART00000026180
fabp7a
fatty acid binding protein 7, brain, a
chr6_-_11768198 0.29 ENSDART00000183463
march7
membrane-associated ring finger (C3HC4) 7
chr2_-_16216568 0.25 ENSDART00000173758
arhgef4
Rho guanine nucleotide exchange factor (GEF) 4
chr16_+_46111849 0.23 ENSDART00000172232
sv2a
synaptic vesicle glycoprotein 2A
chr21_-_22635245 0.22 ENSDART00000115224
ENSDART00000101782
nectin1a
nectin cell adhesion molecule 1a
chr10_-_27049170 0.22 ENSDART00000143451
cnih2
cornichon family AMPA receptor auxiliary protein 2
chr22_+_23359369 0.18 ENSDART00000170886
dennd1b
DENN/MADD domain containing 1B
chr17_+_20589553 0.16 ENSDART00000154447
si:ch73-288o11.4
si:ch73-288o11.4
chr14_-_413273 0.15 ENSDART00000163976
ENSDART00000179907
FAT4
FAT atypical cadherin 4
chr14_-_4556896 0.15 ENSDART00000044678
ENSDART00000192863
GABRA2
gamma-aminobutyric acid type A receptor alpha2 subunit
chr19_+_43297546 0.14 ENSDART00000168002
laptm5
lysosomal protein transmembrane 5
chr4_-_9891874 0.12 ENSDART00000067193
adm2a
adrenomedullin 2a
chr9_-_43538328 0.11 ENSDART00000140526
znf385b
zinc finger protein 385B
chr3_+_23029484 0.10 ENSDART00000187900
nags
N-acetylglutamate synthase
chr16_-_12173399 0.10 ENSDART00000142574
clstn3
calsyntenin 3
chr6_+_11249706 0.10 ENSDART00000186547
ENSDART00000193287
atg9a
ATG9 autophagy related 9 homolog A (S. cerevisiae)
chr11_-_2838699 0.09 ENSDART00000066189
lhfpl5a
LHFPL tetraspan subfamily member 5a
chr8_-_33381913 0.08 ENSDART00000076420
lmx1bb
LIM homeobox transcription factor 1, beta b
chr25_-_13490744 0.08 ENSDART00000056721
ldhd
lactate dehydrogenase D
chr6_+_11250033 0.07 ENSDART00000065411
ENSDART00000132677
atg9a
ATG9 autophagy related 9 homolog A (S. cerevisiae)
chr5_-_30620625 0.07 ENSDART00000098273
tcnl
transcobalamin like
chr5_-_63302944 0.07 ENSDART00000047110
gsnb
gelsolin b
chr7_+_38811800 0.07 ENSDART00000052322
zgc:110699
zgc:110699
chr22_+_508290 0.06 ENSDART00000135403
nuak2
NUAK family, SNF1-like kinase, 2
chr17_+_22577472 0.05 ENSDART00000045099
yipf4
Yip1 domain family, member 4
chr15_-_39955785 0.05 ENSDART00000154556
msh5
mutS homolog 5
chr3_-_26787430 0.05 ENSDART00000087047
rab40c
RAB40c, member RAS oncogene family
chr9_+_54039006 0.05 ENSDART00000112441
tlr7
toll-like receptor 7
chr7_+_21272833 0.04 ENSDART00000052942
serpinh2
serine (or cysteine) peptidase inhibitor, clade H, member 2
chr17_-_21418340 0.04 ENSDART00000007021
atp6v1ba
ATPase, H+ transporting, lysosomal, V1 subunit B, member a
chr1_-_31534089 0.04 ENSDART00000007770
lbx1b
ladybird homeobox 1b
chr5_+_71802014 0.04 ENSDART00000124939
ENSDART00000097164
LHX3
LIM homeobox 3
chr14_-_470505 0.04 ENSDART00000067147
ANKRD50
ankyrin repeat domain 50
chr13_+_33268657 0.03 ENSDART00000002095
tmem39b
transmembrane protein 39B
chr25_-_4525081 0.03 ENSDART00000184347
pidd1
p53-induced death domain protein 1
chr6_+_11250316 0.03 ENSDART00000137122
atg9a
ATG9 autophagy related 9 homolog A (S. cerevisiae)
chr17_+_50524573 0.03 ENSDART00000187974
CR382385.1

chr20_-_9095105 0.03 ENSDART00000140792
oma1
OMA1 zinc metallopeptidase
chr15_-_14552101 0.03 ENSDART00000171169
numbl
numb homolog (Drosophila)-like
chr22_+_19366866 0.03 ENSDART00000137301
si:dkey-21e2.12
si:dkey-21e2.12
chr9_-_9415000 0.02 ENSDART00000146210
si:ch211-214p13.9
si:ch211-214p13.9
chr9_-_32177117 0.02 ENSDART00000078568
sf3b1
splicing factor 3b, subunit 1
chr23_+_16638639 0.01 ENSDART00000143545
snphb
syntaphilin b
chr15_-_22074315 0.01 ENSDART00000149830
drd2a
dopamine receptor D2a
chr8_-_53044300 0.01 ENSDART00000191653
nr6a1a
nuclear receptor subfamily 6, group A, member 1a
chr21_+_25236297 0.01 ENSDART00000112783
tmem45b
transmembrane protein 45B
chr21_+_27513859 0.01 ENSDART00000065420
pacs1a
phosphofurin acidic cluster sorting protein 1a
chr22_+_2751887 0.00 ENSDART00000133652
si:dkey-20i20.11
si:dkey-20i20.11
chr8_-_49728590 0.00 ENSDART00000135714
ENSDART00000138810
ENSDART00000098319
gkap1
G kinase anchoring protein 1

Network of associatons between targets according to the STRING database.

First level regulatory network of phox2bb

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0044650 virion attachment to host cell(GO:0019062) adhesion of symbiont to host(GO:0044406) adhesion of symbiont to host cell(GO:0044650)
0.1 0.5 GO:0051965 positive regulation of synapse assembly(GO:0051965)
0.0 0.6 GO:0060088 auditory receptor cell stereocilium organization(GO:0060088)
0.0 0.1 GO:0006089 lactate metabolic process(GO:0006089)
0.0 0.1 GO:0006526 arginine biosynthetic process(GO:0006526)
0.0 0.2 GO:0044805 late nucleophagy(GO:0044805)
0.0 0.0 GO:0034154 toll-like receptor 7 signaling pathway(GO:0034154)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.7 GO:0005504 fatty acid binding(GO:0005504)
0.0 0.1 GO:0034618 arginine binding(GO:0034618)