PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
pou6f1 | dr11_v1_chr23_-_33702900_33702900 | -0.60 | 7.0e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr9_-_22339582 Show fit | 3.26 |
ENSDART00000134805
|
crystallin, gamma M2d1 |
|
chr16_+_26017360 Show fit | 2.05 |
ENSDART00000149466
|
protease, serine, 59, tandem duplicate 2 |
|
chr16_+_26012569 Show fit | 1.90 |
ENSDART00000148846
|
protease, serine, 59, tandem duplicate 1 |
|
chr14_+_50770537 Show fit | 1.31 |
ENSDART00000158723
|
synuclein, beta |
|
chr15_-_16098531 Show fit | 1.18 |
ENSDART00000080377
|
aldolase C, fructose-bisphosphate, a |
|
chr4_+_22365061 Show fit | 1.00 |
ENSDART00000039277
|
LHFPL tetraspan subfamily member 3 |
|
chr3_-_28250722 Show fit | 0.99 |
ENSDART00000165936
|
RNA binding fox-1 homolog 1 |
|
chr6_+_60055168 Show fit | 0.85 |
ENSDART00000008752
|
phosphoenolpyruvate carboxykinase 1 (soluble) |
|
chr12_+_20352400 Show fit | 0.80 |
ENSDART00000066383
|
hemoglobin, alpha embryonic 5 |
|
chr22_-_15385442 Show fit | 0.79 |
ENSDART00000090975
|
transmembrane protein 264 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.3 | GO:0002088 | lens development in camera-type eye(GO:0002088) |
0.1 | 1.3 | GO:0071542 | dopaminergic neuron differentiation(GO:0071542) |
0.0 | 1.2 | GO:0030388 | fructose 1,6-bisphosphate metabolic process(GO:0030388) |
0.0 | 1.0 | GO:0021854 | limbic system development(GO:0021761) hypothalamus development(GO:0021854) |
0.2 | 0.9 | GO:0072673 | lamellipodium morphogenesis(GO:0072673) regulation of lamellipodium morphogenesis(GO:2000392) |
0.2 | 0.9 | GO:0019626 | glycerol biosynthetic process(GO:0006114) alditol biosynthetic process(GO:0019401) short-chain fatty acid catabolic process(GO:0019626) response to dexamethasone(GO:0071548) |
0.0 | 0.8 | GO:0015671 | oxygen transport(GO:0015671) |
0.1 | 0.7 | GO:0006107 | oxaloacetate metabolic process(GO:0006107) |
0.0 | 0.7 | GO:0007631 | feeding behavior(GO:0007631) |
0.0 | 0.7 | GO:0051085 | chaperone mediated protein folding requiring cofactor(GO:0051085) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.3 | GO:0043679 | axon terminus(GO:0043679) |
0.2 | 0.9 | GO:0032433 | filopodium tip(GO:0032433) |
0.1 | 0.8 | GO:0031838 | haptoglobin-hemoglobin complex(GO:0031838) |
0.0 | 0.7 | GO:0031680 | G-protein beta/gamma-subunit complex(GO:0031680) |
0.0 | 0.6 | GO:0005869 | dynactin complex(GO:0005869) |
0.0 | 0.4 | GO:0000813 | ESCRT I complex(GO:0000813) |
0.0 | 0.2 | GO:0030877 | beta-catenin destruction complex(GO:0030877) |
0.0 | 0.2 | GO:0005605 | basal lamina(GO:0005605) laminin complex(GO:0043256) |
0.0 | 0.2 | GO:0031430 | M band(GO:0031430) |
0.0 | 0.1 | GO:0033010 | paranodal junction(GO:0033010) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.9 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.0 | 3.3 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.4 | 1.3 | GO:1903136 | cuprous ion binding(GO:1903136) |
0.1 | 1.2 | GO:0004332 | fructose-bisphosphate aldolase activity(GO:0004332) |
0.0 | 0.9 | GO:0030145 | manganese ion binding(GO:0030145) |
0.0 | 0.9 | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding(GO:0005546) |
0.1 | 0.8 | GO:0031720 | haptoglobin binding(GO:0031720) |
0.1 | 0.7 | GO:0031843 | neuropeptide Y receptor binding(GO:0031841) type 2 neuropeptide Y receptor binding(GO:0031843) |
0.1 | 0.7 | GO:0030060 | L-malate dehydrogenase activity(GO:0030060) |
0.1 | 0.7 | GO:0004865 | protein serine/threonine phosphatase inhibitor activity(GO:0004865) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.9 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 0.9 | REACTOME ABACAVIR TRANSPORT AND METABOLISM | Genes involved in Abacavir transport and metabolism |
0.0 | 0.7 | REACTOME THROMBOXANE SIGNALLING THROUGH TP RECEPTOR | Genes involved in Thromboxane signalling through TP receptor |
0.0 | 0.6 | REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES | Genes involved in Loss of Nlp from mitotic centrosomes |
0.0 | 0.4 | REACTOME MEMBRANE BINDING AND TARGETTING OF GAG PROTEINS | Genes involved in Membrane binding and targetting of GAG proteins |