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PRJEB1986: zebrafish developmental stages transcriptome

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Results for ptf1a+si:dkey-34f9.3

Z-value: 0.83

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Transcription factors associated with ptf1a+si:dkey-34f9.3

Gene Symbol Gene ID Gene Info
ptf1a
ENSDARG00000014479 pancreas associated transcription factor 1a
si_dkey-34f9.3
ENSDARG00000077813 si_dkey-34f9.3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
si:dkey-34f9.3dr11_v1_chr9_+_45789887_45789887-0.371.2e-01Click!
ptf1adr11_v1_chr2_+_29710857_297108570.038.9e-01Click!

Activity profile of ptf1a+si:dkey-34f9.3 motif

Sorted Z-values of ptf1a+si:dkey-34f9.3 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr21_-_25601648 1.94 ENSDART00000042578
efemp2b
EGF containing fibulin extracellular matrix protein 2b
chr3_+_41917499 1.76 ENSDART00000028673
lfng
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
chr22_+_22438783 1.71 ENSDART00000147825
kif14
kinesin family member 14
chr7_+_41812636 1.59 ENSDART00000174333
orc6
origin recognition complex, subunit 6
chr2_-_59345920 1.56 ENSDART00000134662
ftr37
finTRIM family, member 37
chr16_-_46572834 1.48 ENSDART00000115248
zgc:174938
zgc:174938
chr3_+_301479 1.40 ENSDART00000165169
CABZ01075611.1

chr2_-_14793343 1.31 ENSDART00000132264
si:ch73-366i20.1
si:ch73-366i20.1
chr18_+_17537975 1.22 ENSDART00000179783
nup93
nucleoporin 93
chr24_-_6029314 1.22 ENSDART00000136155
ftr60
finTRIM family, member 60
chr7_+_41812817 1.21 ENSDART00000174165
orc6
origin recognition complex, subunit 6
chr4_-_76488581 1.21 ENSDART00000174291
ftr51
finTRIM family, member 51
chr11_-_27827442 1.17 ENSDART00000121847
ENSDART00000132018
ENSDART00000145744
ENSDART00000134677
ENSDART00000130800
cstf1
cleavage stimulation factor, 3' pre-RNA, subunit 1
chr13_-_25196758 1.17 ENSDART00000184722
adka
adenosine kinase a
chr16_-_46573211 1.16 ENSDART00000193392
zgc:174938
zgc:174938
chr18_+_17537344 1.15 ENSDART00000025782
nup93
nucleoporin 93
chr4_-_76488854 1.12 ENSDART00000132323
ftr51
finTRIM family, member 51
chr14_-_30390145 1.11 ENSDART00000045423
slc7a2
solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
chr7_+_41812190 1.07 ENSDART00000113732
ENSDART00000174137
orc6
origin recognition complex, subunit 6
chr2_-_59231017 1.06 ENSDART00000143980
ENSDART00000184190
ftr29
finTRIM family, member 29
chr11_+_45347961 1.02 ENSDART00000172962
si:ch73-100l22.3
si:ch73-100l22.3
chr3_+_37649436 0.98 ENSDART00000075039
gosr2
golgi SNAP receptor complex member 2
chr7_+_5904020 0.96 ENSDART00000172847
hist1h2a11
histone cluster 1 H2A family member 11
chr2_+_42294944 0.95 ENSDART00000140599
ENSDART00000178811
ftr06
finTRIM family, member 6
chr8_-_36554675 0.95 ENSDART00000132804
ENSDART00000078746
ccdc157
coiled-coil domain containing 157
chr18_-_45736 0.93 ENSDART00000148373
ENSDART00000148950
gatm
glycine amidinotransferase (L-arginine:glycine amidinotransferase)
chr10_-_45029041 0.93 ENSDART00000167878
polm
polymerase (DNA directed), mu
chr2_-_59265521 0.92 ENSDART00000146341
ENSDART00000097799
ftr33
finTRIM family, member 33
chr8_+_16758304 0.91 ENSDART00000133514
elovl7a
ELOVL fatty acid elongase 7a
chr15_-_2519640 0.89 ENSDART00000047013
srprb
signal recognition particle receptor, B subunit
chr4_-_41772315 0.87 ENSDART00000193109
znf976
zinc finger protein 976
chr7_+_44608224 0.87 ENSDART00000005033
cmtm3
CKLF-like MARVEL transmembrane domain containing 3
chr11_-_16021424 0.86 ENSDART00000193291
ENSDART00000170731
ENSDART00000104107
zgc:173544
zgc:173544
chr1_-_59567685 0.85 ENSDART00000159144
ENSDART00000182913
zmp:0000001082
zmp:0000001082
chr16_-_27676123 0.82 ENSDART00000180804
tbrg4
transforming growth factor beta regulator 4
chr2_+_42260021 0.81 ENSDART00000124702
ENSDART00000140203
ENSDART00000184079
ENSDART00000193349
ftr04
finTRIM family, member 4
chr2_-_59376399 0.80 ENSDART00000137134
ftr38
finTRIM family, member 38
chr13_+_9100 0.79 ENSDART00000165772
ppp4r3b
protein phosphatase 4, regulatory subunit 3B
chr9_+_343062 0.77 ENSDART00000164012
ENSDART00000164365
bpifcl
BPI fold containing family C, like
chr2_-_59205393 0.76 ENSDART00000056417
ENSDART00000182452
ENSDART00000141876
ftr30
finTRIM family, member 30
chr2_-_43130812 0.75 ENSDART00000039079
ENSDART00000056162
ftr13
finTRIM family, member 13
chr11_-_22372072 0.75 ENSDART00000065996
tmem183a
transmembrane protein 183A
chr17_-_14451405 0.73 ENSDART00000146786
jkamp
jnk1/mapk8 associated membrane protein
chr7_+_44608478 0.73 ENSDART00000149981
cmtm3
CKLF-like MARVEL transmembrane domain containing 3
chr4_+_77681389 0.72 ENSDART00000099727
gbp4
guanylate binding protein 4
chr22_-_26251563 0.72 ENSDART00000060888
ENSDART00000142821
ccdc130
coiled-coil domain containing 130
chr5_-_30704390 0.71 ENSDART00000016709
ift22
intraflagellar transport 22 homolog (Chlamydomonas)
chr2_-_59327299 0.70 ENSDART00000133734
ftr36
finTRIM family, member 36
chr23_+_4890693 0.70 ENSDART00000023537
tnnc1a
troponin C type 1a (slow)
chr8_-_18879905 0.69 ENSDART00000100491
sh3gl1b
SH3-domain GRB2-like 1b
chr11_-_36046458 0.67 ENSDART00000061520
brk1
BRICK1, SCAR/WAVE actin-nucleating complex subunit
chr16_+_9762261 0.67 ENSDART00000020654
psmd4b
proteasome 26S subunit, non-ATPase 4b
chr18_-_5875433 0.66 ENSDART00000151727
nob1
NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
chr8_-_1267247 0.65 ENSDART00000150064
cdc14b
cell division cycle 14B
chr15_+_31911989 0.65 ENSDART00000111472
brca2
breast cancer 2, early onset
chr23_+_9353552 0.64 ENSDART00000163298
BX511246.1

chr3_+_17878466 0.61 ENSDART00000180218
dnajc7
DnaJ (Hsp40) homolog, subfamily C, member 7
chr24_+_35911300 0.60 ENSDART00000129679
abcd4
ATP-binding cassette, sub-family D (ALD), member 4
chr2_+_47927026 0.60 ENSDART00000143023
ftr25
finTRIM family, member 25
chr15_+_2475894 0.58 ENSDART00000035939
panx1a
pannexin 1a
chr12_+_18663154 0.58 ENSDART00000057918
si:ch211-147h1.4
si:ch211-147h1.4
chr15_-_35098345 0.57 ENSDART00000181824
CR387932.1

chr2_-_42628028 0.56 ENSDART00000179866
myo10
myosin X
chr3_-_20721064 0.55 ENSDART00000193532
spop
speckle-type POZ protein
chr15_-_41523225 0.53 ENSDART00000141202
ENSDART00000099290
ENSDART00000170395
ENSDART00000099437
si:dkey-230i18.2
si:dkey-121n8.7
nlrc9
si:dkey-230i18.2
si:dkey-121n8.7
NLR family CARD domain containing 9
chr6_-_58975010 0.51 ENSDART00000144911
ENSDART00000144514
mars
methionyl-tRNA synthetase
chr18_+_3140682 0.51 ENSDART00000166382
clns1a
chloride channel, nucleotide-sensitive, 1A
chr18_+_5490668 0.50 ENSDART00000167035
mibp2
muscle-specific beta 1 integrin binding protein 2
chr4_-_33371634 0.49 ENSDART00000150712
si:dkeyp-4f2.3
si:dkeyp-4f2.3
chr5_-_48070779 0.48 ENSDART00000078401
tmem161b
transmembrane protein 161B
chr1_+_26467071 0.47 ENSDART00000112329
ENSDART00000159318
ENSDART00000193833
ENSDART00000011809
uso1
USO1 vesicle transport factor
chr5_+_62723233 0.46 ENSDART00000183718
nanos2
nanos homolog 2
chr17_-_51818659 0.46 ENSDART00000111389
ENSDART00000157244
exd2
exonuclease 3'-5' domain containing 2
chr3_-_4591643 0.45 ENSDART00000138144
ftr50
finTRIM family, member 50
chr4_-_16883051 0.44 ENSDART00000124627
strap
serine/threonine kinase receptor associated protein
chr7_+_29177191 0.44 ENSDART00000008096
aph1b
APH1B gamma secretase subunit
chr2_-_47904043 0.43 ENSDART00000185328
ENSDART00000126740
ftr22
finTRIM family, member 22
chr4_-_71983381 0.42 ENSDART00000169130
ftr64
finTRIM family, member 64
chr12_-_6172154 0.42 ENSDART00000185434
a1cf
apobec1 complementation factor
chr2_-_43151358 0.41 ENSDART00000061170
ENSDART00000056161
ftr15
finTRIM family, member 15
chr25_-_34670413 0.41 ENSDART00000073440
DNAJA4
DnaJ heat shock protein family (Hsp40) member A4
chr3_+_62196672 0.40 ENSDART00000097312
sco1
SCO1 cytochrome c oxidase assembly protein
chr3_+_61522759 0.39 ENSDART00000106266
znf1004
zinc finger protein 1004
chr7_-_48368593 0.38 ENSDART00000174221
sin3ab
SIN3 transcription regulator family member Ab
chr2_-_1514001 0.38 ENSDART00000057736
c8b
complement component 8, beta polypeptide
chr11_-_36046741 0.38 ENSDART00000184229
brk1
BRICK1, SCAR/WAVE actin-nucleating complex subunit
chr4_-_65323874 0.38 ENSDART00000175271
ENSDART00000187913
BX571813.1

chr24_-_33756003 0.37 ENSDART00000079283
tmeff1b
transmembrane protein with EGF-like and two follistatin-like domains 1b
chr18_-_19491162 0.36 ENSDART00000090413
snapc5
small nuclear RNA activating complex, polypeptide 5
chr13_+_33452096 0.36 ENSDART00000057370
ftr80
finTRIM family, member 80
chr2_-_59178742 0.36 ENSDART00000170594
ENSDART00000109246
ftr95
finTRIM family, member 95
chr18_-_50921002 0.35 ENSDART00000017053
ENSDART00000008696
cttn
cortactin
chr16_-_30932533 0.35 ENSDART00000085761
slc45a4
solute carrier family 45, member 4
chr21_-_32467099 0.34 ENSDART00000186354
zgc:123105
zgc:123105
chr22_-_36690742 0.34 ENSDART00000017188
ENSDART00000124698
ncl
nucleolin
chr21_-_1642739 0.33 ENSDART00000151118
zgc:152948
zgc:152948
chr16_-_46567344 0.33 ENSDART00000127721
si:dkey-152b24.7
si:dkey-152b24.7
chr15_+_12435975 0.33 ENSDART00000168011
tmprss4a
transmembrane protease, serine 4a
chr16_+_35905031 0.32 ENSDART00000162411
sh3d21
SH3 domain containing 21
chr4_-_38281909 0.32 ENSDART00000162448
si:ch211-229l10.9
si:ch211-229l10.9
chr3_-_4557653 0.32 ENSDART00000111305
ftr50
finTRIM family, member 50
chr4_+_38981587 0.31 ENSDART00000142713
si:dkey-66k12.3
si:dkey-66k12.3
chr18_-_502722 0.31 ENSDART00000185757
sdr42e1
short chain dehydrogenase/reductase family 42E, member 1
chr5_+_28858345 0.31 ENSDART00000111180
si:ch211-186e20.2
si:ch211-186e20.2
chr10_+_10386435 0.30 ENSDART00000179214
ENSDART00000189799
ENSDART00000193875
sardh
sarcosine dehydrogenase
chr7_+_49664174 0.29 ENSDART00000137059
ENSDART00000131210
rassf7b
Ras association (RalGDS/AF-6) domain family (N-terminal) member 7b
chr18_-_1414760 0.28 ENSDART00000171881
PEPD
peptidase D
chr24_+_6353394 0.28 ENSDART00000165118
CR352329.1

chr18_-_48530221 0.27 ENSDART00000188134
ENSDART00000142107
kcnj1a.2
potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2
chr10_-_15048781 0.27 ENSDART00000038401
ENSDART00000155674
si:ch211-95j8.2
si:ch211-95j8.2
chr3_-_48980319 0.26 ENSDART00000165319
ftr42
finTRIM family, member 42
chr15_-_37620167 0.24 ENSDART00000059582
si:ch211-137j23.8
si:ch211-137j23.8
chr15_-_37610434 0.24 ENSDART00000156856
CR848763.1

chr8_+_14959587 0.24 ENSDART00000138548
ENSDART00000041697
abl2
c-abl oncogene 2, non-receptor tyrosine kinase
chr22_+_1541083 0.23 ENSDART00000169338
si:ch211-255f4.7
si:ch211-255f4.7
chr1_-_40123943 0.23 ENSDART00000146917
si:ch211-113e8.10
si:ch211-113e8.10
chr3_+_5504990 0.22 ENSDART00000143626
si:ch73-264i18.2
si:ch73-264i18.2
chr4_-_7231480 0.22 ENSDART00000159436
si:ch211-170p16.1
si:ch211-170p16.1
chr22_-_9677264 0.22 ENSDART00000181737
si:dkey-286j17.4
si:dkey-286j17.4
chr15_-_46828958 0.22 ENSDART00000045110
chrd
chordin
chr16_-_30826712 0.21 ENSDART00000122474
ptk2ab
protein tyrosine kinase 2ab
chr15_-_5198191 0.21 ENSDART00000174064
or128-9
odorant receptor, family E, subfamily 128, member 9
chr4_-_58964138 0.21 ENSDART00000150259
si:ch211-64i20.3
si:ch211-64i20.3
chr15_-_5222597 0.19 ENSDART00000123819
or128-4
odorant receptor, family E, subfamily 128, member 4
chr17_+_21477892 0.18 ENSDART00000155309
pla2g4f.2
phospholipase A2, group IVF, tandem duplicate 2
chr18_-_18543358 0.17 ENSDART00000126460
il34
interleukin 34
chr17_-_11015878 0.17 ENSDART00000162249
dact1
dishevelled-binding antagonist of beta-catenin 1
chr12_+_47122104 0.17 ENSDART00000184248
CABZ01088982.1

chr15_-_34933560 0.17 ENSDART00000006288
dhx16
DEAH (Asp-Glu-Ala-His) box polypeptide 16
chr3_-_17871846 0.17 ENSDART00000074478
ENSDART00000187941
nkiras2
NFKB inhibitor interacting Ras-like 2
chr15_-_5262942 0.16 ENSDART00000138003
or127-1
odorant receptor, family E, subfamily 127, member 1
chr5_+_38096729 0.16 ENSDART00000135428
si:ch211-284e13.5
si:ch211-284e13.5
chr6_-_29105727 0.16 ENSDART00000184355
fam69ab
family with sequence similarity 69, member Ab
chr8_-_22274222 0.16 ENSDART00000131805
nphp4
nephronophthisis 4
chr4_+_69801372 0.16 ENSDART00000154125
si:dkey-238o14.7
si:dkey-238o14.7
chr5_+_28857969 0.16 ENSDART00000149850
si:ch211-186e20.2
si:ch211-186e20.2
chr4_+_40018440 0.15 ENSDART00000110827
si:dkey-199k11.6
si:dkey-199k11.6
chr7_+_24523017 0.15 ENSDART00000077047
btr09
bloodthirsty-related gene family, member 9
chr25_+_37297659 0.12 ENSDART00000086733
si:dkey-234i14.13
si:dkey-234i14.13
chr1_+_54835131 0.12 ENSDART00000145070
si:ch211-196h16.4
si:ch211-196h16.4
chr2_+_47935476 0.11 ENSDART00000140555
ftr26
finTRIM family, member 26
chr5_+_28849155 0.11 ENSDART00000079090
zgc:174259
zgc:174259
chr18_+_5875268 0.11 ENSDART00000177784
ENSDART00000122009
wdr59
WD repeat domain 59
chr15_-_1534232 0.11 ENSDART00000056763
ENSDART00000133943
ift80
intraflagellar transport 80 homolog (Chlamydomonas)
chr21_-_19906388 0.11 ENSDART00000114969
mfhas1
malignant fibrous histiocytoma amplified sequence 1
chr10_+_506538 0.10 ENSDART00000141713
si:ch211-242f23.3
si:ch211-242f23.3
chr2_-_44368824 0.09 ENSDART00000155662
si:ch211-265g22.4
si:ch211-265g22.4
chr15_+_33851280 0.08 ENSDART00000162308
inpp5ka
inositol polyphosphate-5-phosphatase Ka
chr3_+_3545825 0.07 ENSDART00000109060
CR589947.1

chr22_+_5123479 0.07 ENSDART00000111822
ENSDART00000081910
loxl5a
lysyl oxidase-like 5a
chr15_-_5212930 0.07 ENSDART00000136845
or128-6
odorant receptor, family E, subfamily 128, member 6
chr20_+_38725662 0.06 ENSDART00000181873
uts1
urotensin 1
chr3_-_4579214 0.06 ENSDART00000164456
ftr50
finTRIM family, member 50
chr22_-_17489040 0.05 ENSDART00000141286
si:ch211-197g15.6
si:ch211-197g15.6
chr23_+_5736226 0.02 ENSDART00000134527
ENSDART00000112220
ftr57
finTRIM family, member 57
chr13_-_226109 0.02 ENSDART00000161705
ENSDART00000172744
ENSDART00000163902
ENSDART00000158208
rtn4b
reticulon 4b
chr18_+_3243292 0.02 ENSDART00000166580
pak1
p21 protein (Cdc42/Rac)-activated kinase 1
chr23_-_6865946 0.00 ENSDART00000056426
ftr58
finTRIM family, member 58

Network of associatons between targets according to the STRING database.

First level regulatory network of ptf1a+si:dkey-34f9.3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.4 GO:0051292 nuclear pore complex assembly(GO:0051292)
0.3 0.9 GO:0006600 creatine metabolic process(GO:0006600) creatine biosynthetic process(GO:0006601)
0.3 1.8 GO:0055016 hypochord development(GO:0055016)
0.3 1.0 GO:1903723 negative regulation of centriole elongation(GO:1903723)
0.2 1.2 GO:0044209 AMP salvage(GO:0044209)
0.2 1.1 GO:0043091 L-arginine import(GO:0043091) amino acid import across plasma membrane(GO:0089718) arginine import(GO:0090467) L-arginine import across plasma membrane(GO:0097638) L-arginine transport(GO:1902023) L-arginine import into cell(GO:1902765) amino acid import into cell(GO:1902837) L-arginine transmembrane transport(GO:1903400) arginine transmembrane transport(GO:1903826)
0.2 1.4 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.1 0.7 GO:0051818 killing of cells of other organism(GO:0031640) disruption of cells of other organism(GO:0044364) disruption of cells of other organism involved in symbiotic interaction(GO:0051818) killing of cells in other organism involved in symbiotic interaction(GO:0051883)
0.1 3.9 GO:0006270 DNA replication initiation(GO:0006270)
0.1 0.8 GO:0044528 regulation of mitochondrial mRNA stability(GO:0044528)
0.1 0.6 GO:0015910 peroxisomal long-chain fatty acid import(GO:0015910)
0.1 0.3 GO:1901052 sarcosine metabolic process(GO:1901052)
0.1 1.9 GO:0048251 elastic fiber assembly(GO:0048251)
0.1 0.6 GO:0032732 positive regulation of interleukin-1 production(GO:0032732)
0.1 0.6 GO:0051673 membrane disruption in other organism(GO:0051673)
0.1 0.4 GO:0006384 transcription initiation from RNA polymerase III promoter(GO:0006384)
0.1 0.6 GO:0071850 mitotic cell cycle arrest(GO:0071850)
0.1 0.2 GO:0045649 regulation of macrophage differentiation(GO:0045649)
0.0 0.4 GO:0007220 Notch receptor processing(GO:0007220)
0.0 0.6 GO:0008585 sex determination(GO:0007530) female gonad development(GO:0008585)
0.0 0.7 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.2 GO:0010159 specification of organ position(GO:0010159)
0.0 0.9 GO:0034626 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.0 0.3 GO:2000095 regulation of Wnt signaling pathway, planar cell polarity pathway(GO:2000095)
0.0 0.7 GO:0014823 response to activity(GO:0014823)
0.0 0.9 GO:0045047 protein targeting to ER(GO:0045047) establishment of protein localization to endoplasmic reticulum(GO:0072599)
0.0 0.4 GO:0016556 mRNA modification(GO:0016556)
0.0 0.9 GO:0006303 double-strand break repair via nonhomologous end joining(GO:0006303)
0.0 0.3 GO:0009303 rRNA transcription(GO:0009303)
0.0 0.7 GO:0000469 cleavage involved in rRNA processing(GO:0000469)
0.0 0.4 GO:0097034 mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.0 0.5 GO:0006884 cell volume homeostasis(GO:0006884)
0.0 0.5 GO:0070831 basement membrane assembly(GO:0070831)
0.0 0.2 GO:0070309 lens fiber cell development(GO:0070307) lens fiber cell morphogenesis(GO:0070309)
0.0 0.1 GO:0098529 neuromuscular junction development, skeletal muscle fiber(GO:0098529)
0.0 0.4 GO:0019835 cytolysis(GO:0019835)
0.0 0.2 GO:0002430 complement receptor mediated signaling pathway(GO:0002430)
0.0 0.7 GO:0006986 response to unfolded protein(GO:0006986)
0.0 0.6 GO:0030050 vesicle transport along actin filament(GO:0030050) actin filament-based transport(GO:0099515)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 3.9 GO:0000808 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.2 0.5 GO:0034709 methylosome(GO:0034709)
0.1 2.4 GO:0034399 nuclear periphery(GO:0034399)
0.1 1.1 GO:0031209 SCAR complex(GO:0031209)
0.1 0.7 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.1 0.4 GO:0070765 gamma-secretase complex(GO:0070765)
0.1 1.2 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.0 0.7 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.0 0.7 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.0 0.8 GO:0030992 intraciliary transport particle B(GO:0030992)
0.0 1.4 GO:0012507 ER to Golgi transport vesicle membrane(GO:0012507)
0.0 0.9 GO:0030867 rough endoplasmic reticulum membrane(GO:0030867)
0.0 0.4 GO:0016580 Sin3 complex(GO:0016580)
0.0 0.4 GO:0005579 membrane attack complex(GO:0005579)
0.0 1.8 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.6 GO:0005921 gap junction(GO:0005921)
0.0 1.7 GO:0005871 kinesin complex(GO:0005871)
0.0 0.6 GO:0031463 Cul3-RING ubiquitin ligase complex(GO:0031463)
0.0 5.2 GO:0000785 chromatin(GO:0000785)
0.0 0.7 GO:0008305 integrin complex(GO:0008305)
0.0 0.6 GO:0005778 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 1.0 GO:0005814 centriole(GO:0005814)
0.0 0.8 GO:0036064 ciliary basal body(GO:0036064)
0.0 0.7 GO:0031901 early endosome membrane(GO:0031901)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.8 GO:0033829 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity(GO:0033829)
0.2 1.2 GO:0004001 adenosine kinase activity(GO:0004001)
0.2 1.1 GO:0015189 L-lysine transmembrane transporter activity(GO:0015189)
0.1 0.6 GO:0055077 gap junction hemi-channel activity(GO:0055077)
0.1 2.4 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.1 0.3 GO:0046997 oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor(GO:0046997)
0.1 0.5 GO:0050262 ribosylnicotinamide kinase activity(GO:0050262)
0.1 0.5 GO:0043035 chromatin insulator sequence binding(GO:0043035)
0.0 0.9 GO:0102337 fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.6 GO:0005324 long-chain fatty acid transporter activity(GO:0005324)
0.0 0.9 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.3 GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity(GO:0003854)
0.0 0.9 GO:0016769 transferase activity, transferring nitrogenous groups(GO:0016769)
0.0 0.7 GO:0048306 calcium-dependent protein binding(GO:0048306)
0.0 0.3 GO:0015272 ATP-activated inward rectifier potassium channel activity(GO:0015272)
0.0 1.3 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 0.2 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.0 1.7 GO:0003777 microtubule motor activity(GO:0003777)
0.0 1.0 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.7 GO:0031593 polyubiquitin binding(GO:0031593)
0.0 2.2 GO:0008081 phosphoric diester hydrolase activity(GO:0008081)
0.0 0.1 GO:0016312 inositol bisphosphate phosphatase activity(GO:0016312)
0.0 0.2 GO:0004875 complement receptor activity(GO:0004875)
0.0 0.6 GO:0030898 actin-dependent ATPase activity(GO:0030898)
0.0 0.7 GO:0004521 endoribonuclease activity(GO:0004521)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.4 PID ARF 3PATHWAY Arf1 pathway
0.0 0.8 PID SYNDECAN 3 PATHWAY Syndecan-3-mediated signaling events
0.0 0.9 PID DNA PK PATHWAY DNA-PK pathway in nonhomologous end joining
0.0 1.2 PID BARD1 PATHWAY BARD1 signaling events
0.0 1.1 PID RAC1 PATHWAY RAC1 signaling pathway
0.0 0.6 PID NETRIN PATHWAY Netrin-mediated signaling events
0.0 0.6 PID FANCONI PATHWAY Fanconi anemia pathway
0.0 0.3 PID UPA UPAR PATHWAY Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling
0.0 0.6 PID HEDGEHOG GLI PATHWAY Hedgehog signaling events mediated by Gli proteins
0.0 0.6 PID PLK1 PATHWAY PLK1 signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 3.9 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.1 1.8 REACTOME PRE NOTCH PROCESSING IN GOLGI Genes involved in Pre-NOTCH Processing in Golgi
0.1 2.4 REACTOME NEP NS2 INTERACTS WITH THE CELLULAR EXPORT MACHINERY Genes involved in NEP/NS2 Interacts with the Cellular Export Machinery
0.1 1.2 REACTOME PROCESSING OF INTRONLESS PRE MRNAS Genes involved in Processing of Intronless Pre-mRNAs
0.0 1.1 REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE Genes involved in Amino acid transport across the plasma membrane
0.0 0.4 REACTOME SIGNALING BY NOTCH2 Genes involved in Signaling by NOTCH2
0.0 1.9 REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S Genes involved in Activation of Chaperone Genes by XBP1(S)
0.0 0.6 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.0 0.4 REACTOME TGF BETA RECEPTOR SIGNALING ACTIVATES SMADS Genes involved in TGF-beta receptor signaling activates SMADs
0.0 0.7 REACTOME INTERFERON GAMMA SIGNALING Genes involved in Interferon gamma signaling
0.0 0.5 REACTOME METABOLISM OF NON CODING RNA Genes involved in Metabolism of non-coding RNA
0.0 0.5 REACTOME CYTOSOLIC TRNA AMINOACYLATION Genes involved in Cytosolic tRNA aminoacylation
0.0 0.6 REACTOME NETRIN1 SIGNALING Genes involved in Netrin-1 signaling
0.0 0.4 REACTOME RNA POL III TRANSCRIPTION INITIATION FROM TYPE 3 PROMOTER Genes involved in RNA Polymerase III Transcription Initiation From Type 3 Promoter
0.0 0.4 REACTOME COMPLEMENT CASCADE Genes involved in Complement cascade