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PRJEB1986: zebrafish developmental stages transcriptome

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Results for raraa+rarab

Z-value: 0.18

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Transcription factors associated with raraa+rarab

Gene Symbol Gene ID Gene Info
ENSDARG00000034893 retinoic acid receptor, alpha b
ENSDARG00000056783 retinoic acid receptor, alpha a
ENSDARG00000111757 retinoic acid receptor, alpha b

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
rarabdr11_v1_chr3_-_33175583_331755830.312.0e-01Click!
raraadr11_v1_chr12_+_11007286_11007286-0.135.9e-01Click!

Activity profile of raraa+rarab motif

1dpf-1 1dpf-2 1dpf-3 1dpf-4 1dpf-5 2dpf-1 2dpf-2 2dpf-3 2dpf-4 3dpf-1 3dpf-2 3dpf-3 3dpf-4 5dpf-1 5dpf-2 5dpf-3 5dpf-4 5dpf-5 14dpf-1 −0.06−0.04−0.0200.020.040.060.08
activity (log2(tpm) per TFBS)

Sorted Z-values of raraa+rarab motif

−0.4−0.3−0.2−0.100.10.20.30.43dpf-1 3dpf-3 3dpf-4 1dpf-4 5dpf-1 1dpf-3 1dpf-2 5dpf-2 1dpf-5 2dpf-2 5dpf-3 5dpf-4 3dpf-2 5dpf-5 1dpf-1 2dpf-1 2dpf-4 14dpf-1 2dpf-3 
Z-value

Network of associatons between targets according to the STRING database.

First level regulatory network of raraa+rarab

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: