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PRJEB1986: zebrafish developmental stages transcriptome

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Results for rfx3_rfx2+rfx4

Z-value: 0.87

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Transcription factors associated with rfx3_rfx2+rfx4

Gene Symbol Gene ID Gene Info
ENSDARG00000014550 regulatory factor X, 3 (influences HLA class II expression)
ENSDARG00000013575 regulatory factor X, 2 (influences HLA class II expression)
ENSDARG00000026395 regulatory factor X, 4
ENSDARG00000116861 regulatory factor X, 4

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
rfx2dr11_v1_chr8_-_20138054_20138251-0.427.5e-02Click!
rfx4dr11_v1_chr18_-_15373620_15373620-0.331.7e-01Click!
rfx3dr11_v1_chr10_-_641609_641609-0.311.9e-01Click!

Activity profile of rfx3_rfx2+rfx4 motif

1dpf-1 1dpf-2 1dpf-3 1dpf-4 1dpf-5 2dpf-1 2dpf-2 2dpf-3 2dpf-4 3dpf-1 3dpf-2 3dpf-3 3dpf-4 5dpf-1 5dpf-2 5dpf-3 5dpf-4 5dpf-5 14dpf-1 −0.06−0.04−0.0200.020.04
activity (log2(tpm) per TFBS)

Sorted Z-values of rfx3_rfx2+rfx4 motif

−2−1.5−1−0.500.511.514dpf-1 1dpf-1 1dpf-3 1dpf-4 5dpf-2 1dpf-2 1dpf-5 5dpf-3 5dpf-1 5dpf-5 5dpf-4 3dpf-2 3dpf-3 2dpf-4 3dpf-4 2dpf-1 3dpf-1 2dpf-2 2dpf-3 
Z-value

Network of associatons between targets according to the STRING database.

First level regulatory network of rfx3_rfx2+rfx4

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: