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PRJEB1986: zebrafish developmental stages transcriptome

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Results for rx1+rx2

Z-value: 0.36

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Transcription factors associated with rx1+rx2

Gene Symbol Gene ID Gene Info
ENSDARG00000040321 retinal homeobox gene 2
ENSDARG00000071684 retinal homeobox gene 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
rx1dr11_v1_chr22_-_5006119_50061190.493.4e-02Click!
rx2dr11_v1_chr2_-_55853943_558539430.381.1e-01Click!

Activity profile of rx1+rx2 motif

1dpf-1 1dpf-2 1dpf-3 1dpf-4 1dpf-5 2dpf-1 2dpf-2 2dpf-3 2dpf-4 3dpf-1 3dpf-2 3dpf-3 3dpf-4 5dpf-1 5dpf-2 5dpf-3 5dpf-4 5dpf-5 14dpf-1 −0.08−0.06−0.04−0.0200.020.040.060.08
activity (log2(tpm) per TFBS)

Sorted Z-values of rx1+rx2 motif

−0.6−0.4−0.200.20.40.60.83dpf-3 5dpf-3 5dpf-5 3dpf-4 14dpf-1 5dpf-1 5dpf-4 5dpf-2 3dpf-1 3dpf-2 1dpf-2 1dpf-4 1dpf-1 1dpf-5 1dpf-3 2dpf-4 2dpf-3 2dpf-2 2dpf-1 
Z-value

Network of associatons between targets according to the STRING database.

First level regulatory network of rx1+rx2

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: