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PRJEB1986: zebrafish developmental stages transcriptome

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Results for rxraa+rxrab+rxrba+rxrgb

Z-value: 1.39

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Transcription factors associated with rxraa+rxrab+rxrba+rxrgb

Gene Symbol Gene ID Gene Info
ENSDARG00000004697 retinoid X receptor, gamma b
ENSDARG00000035127 retinoid x receptor, alpha b
ENSDARG00000057737 retinoid X receptor, alpha a
ENSDARG00000078954 retinoid x receptor, beta a

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
rxrbadr11_v1_chr19_-_7274844_72748440.921.7e-08Click!
rxraadr11_v1_chr21_+_17880511_178805110.862.8e-06Click!
rxrabdr11_v1_chr5_-_64511428_645114280.662.2e-03Click!
rxrgbdr11_v1_chr20_+_33875256_33875256-0.058.3e-01Click!

Activity profile of rxraa+rxrab+rxrba+rxrgb motif

1dpf-1 1dpf-2 1dpf-3 1dpf-4 1dpf-5 2dpf-1 2dpf-2 2dpf-3 2dpf-4 3dpf-1 3dpf-2 3dpf-3 3dpf-4 5dpf-1 5dpf-2 5dpf-3 5dpf-4 5dpf-5 14dpf-1 −0.1−0.0500.050.1
activity (log2(tpm) per TFBS)

Sorted Z-values of rxraa+rxrab+rxrba+rxrgb motif

−2−1.5−1−0.500.511.523dpf-1 2dpf-4 3dpf-4 2dpf-2 2dpf-3 2dpf-1 3dpf-3 3dpf-2 1dpf-4 1dpf-2 1dpf-5 1dpf-1 1dpf-3 5dpf-4 5dpf-2 5dpf-5 5dpf-3 5dpf-1 14dpf-1 
Z-value

Network of associatons between targets according to the STRING database.

First level regulatory network of rxraa+rxrab+rxrba+rxrgb

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: