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PRJEB1986: zebrafish developmental stages transcriptome

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Results for smad2_smad10a+smad4a_smad1

Z-value: 1.36

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Transcription factors associated with smad2_smad10a+smad4a_smad1

Gene Symbol Gene ID Gene Info
ENSDARG00000006389 SMAD family member 2
ENSDARG00000045094 si_dkey-222b8.1
ENSDARG00000070428 si_dkey-222b8.1
ENSDARG00000075226 SMAD family member 4a
ENSDARG00000027199 SMAD family member 1
ENSDARG00000112617 SMAD family member 1
ENSDARG00000115674 SMAD family member 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
smad2dr11_v1_chr10_-_14920989_149209890.796.1e-05Click!
si:dkey-239n17.4dr11_v1_chr16_-_28876479_288764790.493.1e-02Click!
si:dkey-222b8.1dr11_v1_chr19_+_23932259_239322590.436.9e-02Click!
smad4adr11_v1_chr10_+_585719_5857190.292.3e-01Click!
smad1dr11_v1_chr1_-_35916247_359162470.262.9e-01Click!

Activity profile of smad2_smad10a+smad4a_smad1 motif

1dpf-1 1dpf-2 1dpf-3 1dpf-4 1dpf-5 2dpf-1 2dpf-2 2dpf-3 2dpf-4 3dpf-1 3dpf-2 3dpf-3 3dpf-4 5dpf-1 5dpf-2 5dpf-3 5dpf-4 5dpf-5 14dpf-1 −0.04−0.03−0.02−0.0100.010.020.030.040.05
activity (log2(tpm) per TFBS)

Sorted Z-values of smad2_smad10a+smad4a_smad1 motif

−2−101233dpf-4 3dpf-1 3dpf-3 3dpf-2 14dpf-1 1dpf-3 1dpf-4 1dpf-5 5dpf-2 1dpf-1 5dpf-5 5dpf-4 5dpf-3 5dpf-1 1dpf-2 2dpf-3 2dpf-4 2dpf-1 2dpf-2 
Z-value

Network of associatons between targets according to the STRING database.

First level regulatory network of smad2_smad10a+smad4a_smad1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: