PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
tfap2e | dr11_v1_chr19_-_47456787_47456787 | 0.23 | 3.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_26704829 Show fit | 0.74 |
ENSDART00000078563
|
neurogenin 1 |
|
chr3_-_55328548 Show fit | 0.43 |
ENSDART00000082944
|
dedicator of cytokinesis 6 |
|
chr23_+_27778670 Show fit | 0.36 |
ENSDART00000053863
|
lysine (K)-specific methyltransferase 2D |
|
chr23_-_27647769 Show fit | 0.32 |
ENSDART00000059974
|
wingless-type MMTV integration site family, member 10b |
|
chr3_-_54607166 Show fit | 0.32 |
ENSDART00000021977
|
DNA (cytosine-5-)-methyltransferase 1 |
|
chr9_+_32358514 Show fit | 0.31 |
ENSDART00000144608
|
phospholipase C like 1 |
|
chr17_+_34186632 Show fit | 0.31 |
ENSDART00000014306
|
membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5) |
|
chr19_+_1184878 Show fit | 0.28 |
ENSDART00000163539
|
scratch family zinc finger 1a |
|
chr7_-_23563092 Show fit | 0.28 |
ENSDART00000132275
|
G protein-coupled receptor 185 b |
|
chr6_-_39313027 Show fit | 0.28 |
ENSDART00000012644
|
keratin 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.7 | GO:0048909 | dorsal spinal cord development(GO:0021516) anterior lateral line nerve development(GO:0048909) |
0.0 | 0.4 | GO:0003428 | growth plate cartilage morphogenesis(GO:0003422) chondrocyte intercalation involved in growth plate cartilage morphogenesis(GO:0003428) |
0.1 | 0.3 | GO:0016332 | establishment or maintenance of polarity of embryonic epithelium(GO:0016332) |
0.1 | 0.3 | GO:0032776 | DNA methylation on cytosine(GO:0032776) |
0.0 | 0.3 | GO:0032228 | regulation of synaptic transmission, GABAergic(GO:0032228) |
0.0 | 0.3 | GO:0071816 | tail-anchored membrane protein insertion into ER membrane(GO:0071816) |
0.0 | 0.3 | GO:0006265 | DNA topological change(GO:0006265) |
0.0 | 0.3 | GO:0090110 | cargo loading into COPII-coated vesicle(GO:0090110) |
0.1 | 0.2 | GO:1990869 | response to chemokine(GO:1990868) cellular response to chemokine(GO:1990869) negative regulation of lymphocyte migration(GO:2000402) negative regulation of T cell migration(GO:2000405) |
0.1 | 0.2 | GO:0045724 | positive regulation of cilium assembly(GO:0045724) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.4 | GO:0044666 | MLL3/4 complex(GO:0044666) |
0.0 | 0.3 | GO:0071818 | BAT3 complex(GO:0071818) |
0.0 | 0.3 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 0.3 | GO:0001917 | photoreceptor inner segment(GO:0001917) |
0.0 | 0.3 | GO:0030127 | COPII vesicle coat(GO:0030127) |
0.1 | 0.2 | GO:0060171 | stereocilium membrane(GO:0060171) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.7 | GO:0070888 | E-box binding(GO:0070888) |
0.0 | 0.4 | GO:0042800 | histone methyltransferase activity (H3-K4 specific)(GO:0042800) |
0.0 | 0.3 | GO:0004028 | 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028) |
0.0 | 0.3 | GO:0003886 | DNA (cytosine-5-)-methyltransferase activity(GO:0003886) |
0.0 | 0.3 | GO:0070628 | proteasome binding(GO:0070628) |
0.0 | 0.3 | GO:0050811 | GABA receptor binding(GO:0050811) |
0.1 | 0.2 | GO:0071889 | 14-3-3 protein binding(GO:0071889) |
0.1 | 0.2 | GO:0033149 | FFAT motif binding(GO:0033149) |
0.0 | 0.2 | GO:0005161 | platelet-derived growth factor receptor binding(GO:0005161) |
0.0 | 0.2 | GO:0008266 | poly(U) RNA binding(GO:0008266) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC | Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC |
0.0 | 0.2 | REACTOME TETRAHYDROBIOPTERIN BH4 SYNTHESIS RECYCLING SALVAGE AND REGULATION | Genes involved in Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation |