PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
zbtb16b | dr11_v1_chr15_-_18361475_18361475 | 0.39 | 1.0e-01 | Click! |
zbtb16a | dr11_v1_chr21_-_23307653_23307796 | 0.18 | 4.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_-_16853464 Show fit | 1.13 |
ENSDART00000125743
ENSDART00000164570 |
solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a |
|
chr8_+_39724138 Show fit | 1.11 |
ENSDART00000009323
|
phospholipase A2, group IB (pancreas) |
|
chr1_+_34203817 Show fit | 0.98 |
ENSDART00000191432
ENSDART00000046094 |
ADP-ribosylation factor-like 6 |
|
chr8_-_6825588 Show fit | 0.92 |
ENSDART00000135834
|
dedicator of cytokinesis 5 |
|
chr1_+_44173245 Show fit | 0.88 |
ENSDART00000159450
ENSDART00000106048 ENSDART00000157763 |
catenin (cadherin-associated protein), delta 1 |
|
chr12_-_20796430 Show fit | 0.86 |
ENSDART00000064339
|
NME/NM23 nucleoside diphosphate kinase 2a |
|
chr10_-_17745345 Show fit | 0.80 |
ENSDART00000132690
ENSDART00000135376 |
si:dkey-200l5.4 |
|
chr6_-_53885514 Show fit | 0.79 |
ENSDART00000173812
ENSDART00000127144 |
calcium channel, voltage-dependent, alpha 2/delta subunit 2a |
|
chr24_+_35947077 Show fit | 0.79 |
ENSDART00000173406
|
obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF b |
|
chr24_-_33578392 Show fit | 0.76 |
ENSDART00000079476
|
|
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.5 | GO:0046051 | UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051) |
0.0 | 1.1 | GO:0035435 | phosphate ion transmembrane transport(GO:0035435) |
0.0 | 1.0 | GO:0036297 | interstrand cross-link repair(GO:0036297) |
0.1 | 0.9 | GO:0032309 | icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) arachidonate transport(GO:1903963) |
0.0 | 0.9 | GO:0008078 | mesodermal cell migration(GO:0008078) |
0.0 | 0.9 | GO:0007520 | myoblast fusion(GO:0007520) |
0.0 | 0.8 | GO:0006306 | DNA alkylation(GO:0006305) DNA methylation(GO:0006306) |
0.1 | 0.7 | GO:0045110 | intermediate filament bundle assembly(GO:0045110) |
0.1 | 0.7 | GO:0006857 | oligopeptide transport(GO:0006857) |
0.0 | 0.7 | GO:0010738 | regulation of protein kinase A signaling(GO:0010738) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.3 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
0.0 | 1.0 | GO:0060170 | ciliary membrane(GO:0060170) |
0.0 | 1.0 | GO:0031305 | integral component of mitochondrial inner membrane(GO:0031305) |
0.1 | 0.7 | GO:0005952 | cAMP-dependent protein kinase complex(GO:0005952) |
0.1 | 0.7 | GO:0045095 | keratin filament(GO:0045095) |
0.1 | 0.5 | GO:0034359 | mature chylomicron(GO:0034359) |
0.0 | 0.5 | GO:0031932 | TORC2 complex(GO:0031932) |
0.0 | 0.5 | GO:0030140 | trans-Golgi network transport vesicle(GO:0030140) |
0.1 | 0.4 | GO:0019008 | molybdopterin synthase complex(GO:0019008) |
0.0 | 0.4 | GO:0005885 | Arp2/3 protein complex(GO:0005885) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.5 | GO:0004550 | nucleoside diphosphate kinase activity(GO:0004550) |
0.1 | 1.1 | GO:0005315 | inorganic phosphate transmembrane transporter activity(GO:0005315) |
0.0 | 1.1 | GO:0004623 | phospholipase A2 activity(GO:0004623) |
0.0 | 1.1 | GO:0005245 | voltage-gated calcium channel activity(GO:0005245) |
0.3 | 1.0 | GO:0045145 | single-stranded DNA 5'-3' exodeoxyribonuclease activity(GO:0045145) |
0.1 | 0.8 | GO:0003886 | DNA (cytosine-5-)-methyltransferase activity(GO:0003886) |
0.1 | 0.7 | GO:0019215 | intermediate filament binding(GO:0019215) |
0.1 | 0.7 | GO:0008603 | cAMP-dependent protein kinase regulator activity(GO:0008603) |
0.1 | 0.7 | GO:0042936 | dipeptide transporter activity(GO:0042936) dipeptide transmembrane transporter activity(GO:0071916) |
0.1 | 0.6 | GO:0008140 | cAMP response element binding protein binding(GO:0008140) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | PID FCER1 PATHWAY | Fc-epsilon receptor I signaling in mast cells |
0.0 | 0.9 | PID ECADHERIN KERATINOCYTE PATHWAY | E-cadherin signaling in keratinocytes |
0.0 | 0.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 0.5 | PID PI3KCI AKT PATHWAY | Class I PI3K signaling events mediated by Akt |
0.0 | 0.5 | PID INSULIN PATHWAY | Insulin Pathway |
0.0 | 0.4 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
0.0 | 0.4 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 0.2 | PID SYNDECAN 2 PATHWAY | Syndecan-2-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 1.1 | REACTOME ACYL CHAIN REMODELLING OF PI | Genes involved in Acyl chain remodelling of PI |
0.0 | 0.8 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.1 | 0.7 | REACTOME CREATION OF C4 AND C2 ACTIVATORS | Genes involved in Creation of C4 and C2 activators |
0.1 | 0.5 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.0 | 0.5 | REACTOME TIE2 SIGNALING | Genes involved in Tie2 Signaling |
0.0 | 0.5 | REACTOME CD28 DEPENDENT PI3K AKT SIGNALING | Genes involved in CD28 dependent PI3K/Akt signaling |
0.0 | 0.4 | REACTOME CTNNB1 PHOSPHORYLATION CASCADE | Genes involved in Beta-catenin phosphorylation cascade |
0.0 | 0.4 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.0 | 0.3 | REACTOME MYOGENESIS | Genes involved in Myogenesis |