PRJEB1986: zebrafish developmental stages transcriptome
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
zbtb3 | dr11_v1_chr14_+_35405518_35405518 | -0.36 | 1.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_52398205 Show fit | 2.93 |
ENSDART00000143225
|
si:ch211-217k17.9 |
|
chr3_-_61185746 Show fit | 2.00 |
ENSDART00000028219
|
parvalbumin 4 |
|
chr7_-_34225011 Show fit | 1.87 |
ENSDART00000049588
|
crystallin beta gamma X |
|
chr2_+_45643122 Show fit | 1.75 |
ENSDART00000138179
|
fibronectin type III domain containing 7, related sequence 4 |
|
chr2_-_27329214 Show fit | 1.30 |
ENSDART00000145835
|
thioredoxin related transmembrane protein 3a |
|
chr16_-_24598042 Show fit | 0.98 |
ENSDART00000156407
ENSDART00000154072 |
si:dkey-56f14.4 |
|
chr13_-_2215213 Show fit | 0.95 |
ENSDART00000129773
|
muscular LMNA-interacting protein |
|
chr24_-_26383978 Show fit | 0.86 |
ENSDART00000031426
|
SKI-like proto-oncogene b |
|
chr7_-_26087807 Show fit | 0.83 |
ENSDART00000052989
|
acetylcholinesterase |
|
chr12_+_10116912 Show fit | 0.82 |
ENSDART00000189630
|
si:dkeyp-118b1.2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | GO:0002088 | lens development in camera-type eye(GO:0002088) |
0.3 | 1.3 | GO:0018171 | peptidyl-cysteine oxidation(GO:0018171) |
0.1 | 1.0 | GO:1905150 | regulation of voltage-gated sodium channel activity(GO:1905150) |
0.0 | 0.9 | GO:0030512 | negative regulation of transforming growth factor beta receptor signaling pathway(GO:0030512) negative regulation of cellular response to transforming growth factor beta stimulus(GO:1903845) |
0.2 | 0.8 | GO:0008291 | acetylcholine metabolic process(GO:0008291) acetate ester metabolic process(GO:1900619) |
0.1 | 0.6 | GO:0031954 | positive regulation of protein autophosphorylation(GO:0031954) |
0.0 | 0.6 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
0.0 | 0.6 | GO:0051932 | synaptic transmission, GABAergic(GO:0051932) |
0.0 | 0.6 | GO:0070593 | dendrite self-avoidance(GO:0070593) |
0.2 | 0.5 | GO:0042245 | RNA repair(GO:0042245) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.0 | GO:0016605 | PML body(GO:0016605) |
0.0 | 0.6 | GO:1902711 | GABA receptor complex(GO:1902710) GABA-A receptor complex(GO:1902711) |
0.0 | 0.6 | GO:0030964 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.0 | 0.4 | GO:0030315 | T-tubule(GO:0030315) |
0.0 | 0.3 | GO:0009925 | basal plasma membrane(GO:0009925) |
0.0 | 0.2 | GO:0042584 | chromaffin granule membrane(GO:0042584) |
0.0 | 0.2 | GO:0033503 | HULC complex(GO:0033503) |
0.0 | 0.2 | GO:0070775 | H3 histone acetyltransferase complex(GO:0070775) MOZ/MORF histone acetyltransferase complex(GO:0070776) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.7 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.2 | 1.3 | GO:0016972 | thiol oxidase activity(GO:0016972) |
0.2 | 1.0 | GO:0005521 | lamin binding(GO:0005521) |
0.0 | 1.0 | GO:0017080 | sodium channel regulator activity(GO:0017080) |
0.0 | 0.9 | GO:0046332 | SMAD binding(GO:0046332) |
0.1 | 0.8 | GO:0004104 | cholinesterase activity(GO:0004104) |
0.1 | 0.6 | GO:0005161 | platelet-derived growth factor receptor binding(GO:0005161) |
0.0 | 0.6 | GO:0008503 | benzodiazepine receptor activity(GO:0008503) GABA-gated chloride ion channel activity(GO:0022851) |
0.0 | 0.6 | GO:0003954 | NADH dehydrogenase activity(GO:0003954) |
0.0 | 0.6 | GO:0098632 | protein binding involved in cell-cell adhesion(GO:0098632) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.8 | PID ATF2 PATHWAY | ATF-2 transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.2 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.1 | 0.6 | REACTOME DSCAM INTERACTIONS | Genes involved in DSCAM interactions |
0.0 | 0.6 | REACTOME GABA A RECEPTOR ACTIVATION | Genes involved in GABA A receptor activation |