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PRJNA195909:zebrafish embryo and larva development

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Results for batf2+batf3

Z-value: 1.37

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Transcription factors associated with batf2+batf3

Gene Symbol Gene ID Gene Info
batf3
ENSDARG00000042577 basic leucine zipper transcription factor, ATF-like 3
batf2
ENSDARG00000105562 si_dkey-23i12.7

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
batf3dr11_v1_chr20_-_37813863_378138630.942.0e-04Click!
si:dkey-23i12.7dr11_v1_chr7_+_25049545_25049577-0.166.7e-01Click!

Activity profile of batf2+batf3 motif

Sorted Z-values of batf2+batf3 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr16_-_29387215 3.52 ENSDART00000148787
s100a1
S100 calcium binding protein A1
chr16_+_27614989 3.34 ENSDART00000005625
glipr2l
GLI pathogenesis-related 2, like
chr23_-_1571682 2.37 ENSDART00000013635
fbxo30b
F-box protein 30b
chr15_+_34963316 2.17 ENSDART00000153840
si:ch73-95l15.5
si:ch73-95l15.5
chr25_-_6447835 2.10 ENSDART00000012820
snupn
snurportin 1
chr3_-_40658820 2.04 ENSDART00000191948
rnf216
ring finger protein 216
chr6_+_475264 1.89 ENSDART00000193615
LO017974.1

chr17_+_15674052 1.89 ENSDART00000156726
bach2a
BTB and CNC homology 1, basic leucine zipper transcription factor 2a
chr16_-_41667101 1.84 ENSDART00000084528
atp2c1
ATPase secretory pathway Ca2+ transporting 1
chr25_-_6448050 1.82 ENSDART00000180616
snupn
snurportin 1
chr7_-_69352424 1.62 ENSDART00000170714
ap1g1
adaptor-related protein complex 1, gamma 1 subunit
chr25_+_19913611 1.62 ENSDART00000155029
gramd4b
GRAM domain containing 4b
chr8_+_11687586 1.60 ENSDART00000146241
atp2a2a
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a
chr11_+_24314148 1.33 ENSDART00000171491
rem1
RAS (RAD and GEM)-like GTP-binding 1
chr11_+_28166165 1.25 ENSDART00000169360
ENSDART00000192311
ephb2b
eph receptor B2b
chr14_-_32959851 1.24 ENSDART00000075157
chic1
cysteine-rich hydrophobic domain 1
chr21_-_14762944 1.19 ENSDART00000114096
arrdc1b
arrestin domain containing 1b
chr11_+_24313931 1.10 ENSDART00000017599
ENSDART00000166045
rem1
RAS (RAD and GEM)-like GTP-binding 1
chr15_-_20412286 1.03 ENSDART00000008589
chp2
calcineurin-like EF-hand protein 2
chr22_+_1821718 0.94 ENSDART00000132220
znf1002
zinc finger protein 1002
chr22_+_2228919 0.93 ENSDART00000133475
znf1161
zinc finger protein 1161
chr22_+_1517318 0.90 ENSDART00000160406
si:ch211-255f4.5
si:ch211-255f4.5
chr22_+_2648931 0.89 ENSDART00000106357
zgc:110821
zgc:110821
chr3_-_16413606 0.89 ENSDART00000127309
ENSDART00000017172
ENSDART00000136465
eftud2
elongation factor Tu GTP binding domain containing 2
chr22_+_1641547 0.88 ENSDART00000159804
si:dkey-1b17.2
si:dkey-1b17.2
chr22_+_1462177 0.85 ENSDART00000164685
si:dkeyp-53d3.5
si:dkeyp-53d3.5
chr22_+_2715815 0.83 ENSDART00000042770
znf1163
zinc finger protein 1163
chr1_+_41666611 0.82 ENSDART00000145789
fbxo41
F-box protein 41
chr1_-_20068155 0.81 ENSDART00000102993
mettl14
methyltransferase like 14
chr22_+_1751640 0.79 ENSDART00000162093
znf1169
zinc finger protein 1169
chr22_+_1668471 0.77 ENSDART00000163358
si:dkey-1b17.5
si:dkey-1b17.5
chr22_+_1953096 0.77 ENSDART00000166630
ENSDART00000186234
si:dkey-15h8.16
si:dkey-15h8.16
chr22_+_1940595 0.77 ENSDART00000163506
znf1167
zinc finger protein 1167
chr10_+_28306749 0.77 ENSDART00000142016
ptrh2
peptidyl-tRNA hydrolase 2
chr5_+_11812089 0.76 ENSDART00000111359
fbxo21
F-box protein 21
chr22_+_2524615 0.76 ENSDART00000134277
znf1003
zinc finger protein 1003
chr2_+_27341559 0.75 ENSDART00000176838
tesk2
testis-specific kinase 2
chr24_+_25822999 0.75 ENSDART00000109809
sh3kbp1
SH3-domain kinase binding protein 1
chr22_+_2751887 0.74 ENSDART00000133652
si:dkey-20i20.11
si:dkey-20i20.11
chr1_+_10305611 0.67 ENSDART00000043881
zgc:77880
zgc:77880
chr22_+_2315996 0.66 ENSDART00000132489
znf1175
zinc finger protein 1175
chr17_-_14591764 0.66 ENSDART00000174703
daam1a
dishevelled associated activator of morphogenesis 1a
chr22_+_2403068 0.65 ENSDART00000132925
ENSDART00000132569
zgc:112977
zgc:112977
chr4_-_13502549 0.65 ENSDART00000140366
si:ch211-266a5.12
si:ch211-266a5.12
chr25_+_37435720 0.61 ENSDART00000164390
chmp1a
charged multivesicular body protein 1A
chr11_-_43226255 0.60 ENSDART00000172929
sptbn1
spectrin, beta, non-erythrocytic 1
chr22_+_2345752 0.54 ENSDART00000143687
zgc:174224
zgc:174224
chr5_+_20823409 0.52 ENSDART00000093185
ENSDART00000142894
limk2
LIM domain kinase 2
chr18_-_12451772 0.52 ENSDART00000175083
si:ch211-1e14.1
si:ch211-1e14.1
chr3_-_40162843 0.51 ENSDART00000129664
ENSDART00000025285
drg2
developmentally regulated GTP binding protein 2
chr8_-_21110233 0.49 ENSDART00000127371
ENSDART00000100276
tmco1
transmembrane and coiled-coil domains 1
chr22_+_1904546 0.49 ENSDART00000164865
si:dkey-15h8.10
si:dkey-15h8.10
chr22_+_2390544 0.48 ENSDART00000147345
ENSDART00000133611
zgc:171435
zgc:171435
chr22_+_2183110 0.47 ENSDART00000159279
ENSDART00000121703
znf1152
zinc finger protein 1152
chr22_+_2207502 0.46 ENSDART00000169162
si:dkeyp-79b7.12
si:dkeyp-79b7.12
chr22_+_2801464 0.46 ENSDART00000132419
si:dkey-20i20.7
si:dkey-20i20.7
chr22_+_2120815 0.38 ENSDART00000169133
ENSDART00000166644
ENSDART00000162221
ENSDART00000157840
znf1155
zinc finger protein 1155
chr7_+_8670398 0.38 ENSDART00000164195
si:ch211-1o7.2
si:ch211-1o7.2
chr22_+_2298419 0.37 ENSDART00000143499
znf1180
zinc finger protein 1180
chr22_+_1947494 0.37 ENSDART00000159121
si:dkey-15h8.15
si:dkey-15h8.15
chr22_+_2111120 0.33 ENSDART00000165525
znf1144
zinc finger protein 1144
chr3_-_49514874 0.32 ENSDART00000167179
asf1ba
anti-silencing function 1Ba histone chaperone
chr22_+_2819613 0.32 ENSDART00000131234
si:dkey-20i20.3
si:dkey-20i20.3
chr22_+_2254972 0.28 ENSDART00000144906
znf1157
zinc finger protein 1157
chr22_+_2189356 0.28 ENSDART00000157502
ENSDART00000164188
znf1165
zinc finger protein 1165
chr22_+_2844865 0.26 ENSDART00000139123
si:dkey-20i20.4
si:dkey-20i20.4
chr7_+_13464878 0.26 ENSDART00000172969
dagla
diacylglycerol lipase, alpha
chr22_+_1922293 0.18 ENSDART00000165758
znf1181
zinc finger protein 1181
chr22_+_1615691 0.18 ENSDART00000171555
si:ch211-255f4.13
si:ch211-255f4.13
chr15_-_762319 0.17 ENSDART00000154306
ENSDART00000157492
si:dkey-7i4.16
znf1011
si:dkey-7i4.16
zinc finger protein 1011
chr22_+_1930589 0.15 ENSDART00000159807
znf1153
zinc finger protein 1153
chr22_+_2247645 0.11 ENSDART00000143366
ENSDART00000147852
si:dkey-4c15.8
si:dkey-4c15.8
chr8_+_53120278 0.11 ENSDART00000125232
nr2c2
nuclear receptor subfamily 2, group C, member 2
chr22_+_1853999 0.10 ENSDART00000163288
znf1174
zinc finger protein 1174
chr25_+_7321675 0.06 ENSDART00000104712
ENSDART00000142934
hmg20a
high mobility group 20A
chr4_+_1283068 0.03 ENSDART00000167233
chrm2a
cholinergic receptor, muscarinic 2a

Network of associatons between targets according to the STRING database.

First level regulatory network of batf2+batf3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 3.9 GO:0061015 RNA import into nucleus(GO:0006404) snRNA import into nucleus(GO:0061015)
0.5 2.4 GO:1901842 regulation of high voltage-gated calcium channel activity(GO:1901841) negative regulation of high voltage-gated calcium channel activity(GO:1901842)
0.4 1.6 GO:0034163 regulation of toll-like receptor 9 signaling pathway(GO:0034163) negative regulation of toll-like receptor 9 signaling pathway(GO:0034164)
0.4 1.8 GO:0055071 manganese ion homeostasis(GO:0055071)
0.2 0.8 GO:0060019 radial glial cell differentiation(GO:0060019)
0.1 1.6 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.1 0.3 GO:0006335 DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.1 0.5 GO:0032469 endoplasmic reticulum calcium ion homeostasis(GO:0032469)
0.1 0.3 GO:0071926 endocannabinoid signaling pathway(GO:0071926) retrograde trans-synaptic signaling by lipid(GO:0098920) retrograde trans-synaptic signaling by endocannabinoid(GO:0098921)
0.1 5.2 GO:0008016 regulation of heart contraction(GO:0008016)
0.0 1.3 GO:0021952 central nervous system projection neuron axonogenesis(GO:0021952)
0.0 0.6 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.7 GO:0072554 endothelial tube morphogenesis(GO:0061154) blood vessel lumenization(GO:0072554)
0.0 1.9 GO:0021549 cerebellum development(GO:0021549)
0.0 0.7 GO:0021986 habenula development(GO:0021986)
0.0 0.7 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.6 GO:0030121 AP-1 adaptor complex(GO:0030121)
0.2 0.8 GO:0045293 MIS complex(GO:0036396) mRNA editing complex(GO:0045293)
0.1 0.6 GO:0008091 spectrin(GO:0008091)
0.1 0.9 GO:0071007 U2-type catalytic step 2 spliceosome(GO:0071007)
0.1 1.6 GO:0033017 sarcoplasmic reticulum membrane(GO:0033017)
0.0 0.6 GO:0000815 ESCRT III complex(GO:0000815)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.8 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.3 0.9 GO:0030623 U5 snRNA binding(GO:0030623)
0.3 0.8 GO:0001734 mRNA (N6-adenosine)-methyltransferase activity(GO:0001734)
0.2 1.2 GO:1990756 protein binding, bridging involved in substrate recognition for ubiquitination(GO:1990756)
0.2 3.9 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.1 3.5 GO:0048306 calcium-dependent protein binding(GO:0048306)
0.1 0.8 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 1.6 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.1 2.2 GO:0098599 palmitoyl-(protein) hydrolase activity(GO:0008474) palmitoyl hydrolase activity(GO:0098599)
0.1 2.4 GO:0005246 calcium channel regulator activity(GO:0005246)
0.1 1.3 GO:0005005 transmembrane-ephrin receptor activity(GO:0005005)
0.1 1.6 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 0.3 GO:0004465 lipoprotein lipase activity(GO:0004465)
0.0 0.7 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 2.3 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.6 GO:0005200 structural constituent of cytoskeleton(GO:0005200)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 PID RHOA PATHWAY RhoA signaling pathway
0.0 3.5 NABA SECRETED FACTORS Genes encoding secreted soluble factors
0.0 0.7 PID ERBB1 INTERNALIZATION PATHWAY Internalization of ErbB1
0.0 0.3 PID NCADHERIN PATHWAY N-cadherin signaling events
0.0 0.6 PID TGFBR PATHWAY TGF-beta receptor signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.6 REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression
0.1 3.9 REACTOME METABOLISM OF NON CODING RNA Genes involved in Metabolism of non-coding RNA
0.0 0.6 REACTOME INTERACTION BETWEEN L1 AND ANKYRINS Genes involved in Interaction between L1 and Ankyrins
0.0 1.8 REACTOME ION TRANSPORT BY P TYPE ATPASES Genes involved in Ion transport by P-type ATPases
0.0 0.5 REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE Genes involved in Sema4D induced cell migration and growth-cone collapse
0.0 0.9 REACTOME MRNA SPLICING MINOR PATHWAY Genes involved in mRNA Splicing - Minor Pathway
0.0 0.7 REACTOME EGFR DOWNREGULATION Genes involved in EGFR downregulation