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PRJNA195909:zebrafish embryo and larva development

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Results for glis2a+glis2b

Z-value: 0.45

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Transcription factors associated with glis2a+glis2b

Gene Symbol Gene ID Gene Info
glis2a
ENSDARG00000078388 GLIS family zinc finger 2a
glis2b
ENSDARG00000100232 GLIS family zinc finger 2b

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
glis2bdr11_v1_chr3_+_12334509_123345090.684.5e-02Click!
glis2adr11_v1_chr22_-_26558166_265581660.019.8e-01Click!

Activity profile of glis2a+glis2b motif

Sorted Z-values of glis2a+glis2b motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr3_-_31804481 1.40 ENSDART00000028270
gfap
glial fibrillary acidic protein
chr20_+_25340814 0.88 ENSDART00000063028
ctgfa
connective tissue growth factor a
chr12_-_4070058 0.79 ENSDART00000042200
aldoab
aldolase a, fructose-bisphosphate, b
chr7_+_18364176 0.79 ENSDART00000171606
ENSDART00000186368
cd248a
CD248 molecule, endosialin a
chr23_-_17470146 0.68 ENSDART00000002398
trim101
tripartite motif containing 101
chr7_+_57725708 0.66 ENSDART00000056466
ENSDART00000142259
ENSDART00000166198
camk2d1
calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1
chr15_-_97205 0.60 ENSDART00000158734
BACE1
beta-secretase 1
chr4_-_17725008 0.43 ENSDART00000016658
chpt1
choline phosphotransferase 1
chr25_+_13191391 0.41 ENSDART00000109937
si:ch211-147m6.2
si:ch211-147m6.2
chr10_+_21701568 0.39 ENSDART00000090748
pcdh1g9
protocadherin 1 gamma 9
chr19_-_15281996 0.37 ENSDART00000103784
edn2
endothelin 2
chr12_-_41619257 0.37 ENSDART00000162967
dpysl4
dihydropyrimidinase-like 4
chr25_+_13191615 0.35 ENSDART00000168849
si:ch211-147m6.2
si:ch211-147m6.2
chr10_-_13116337 0.35 ENSDART00000164568
musk
muscle, skeletal, receptor tyrosine kinase
chr16_-_16590780 0.33 ENSDART00000059841
si:ch211-257p13.3
si:ch211-257p13.3
chr5_-_42272517 0.32 ENSDART00000137692
ENSDART00000164363
si:ch211-207c6.2
si:ch211-207c6.2
chr23_-_45705525 0.30 ENSDART00000148959
ednrab
endothelin receptor type Ab
chr24_+_25471196 0.28 ENSDART00000066625
smpx
small muscle protein, X-linked
chr17_-_20717845 0.27 ENSDART00000150037
ank3b
ankyrin 3b
chr3_-_61592417 0.25 ENSDART00000155082
nptx2a
neuronal pentraxin 2a
chr16_+_3004422 0.24 ENSDART00000189969
CABZ01043952.1

chr23_-_29004753 0.23 ENSDART00000002812
casz1
castor zinc finger 1
chr10_+_33982010 0.22 ENSDART00000180431
fryb
furry homolog b (Drosophila)
chr23_-_29003864 0.22 ENSDART00000148257
casz1
castor zinc finger 1
chr17_-_3291369 0.20 ENSDART00000181840
CABZ01007222.1

chr24_-_9960290 0.20 ENSDART00000143390
ENSDART00000092975
ENSDART00000184953
vps41
vacuolar protein sorting 41 homolog (S. cerevisiae)
chr12_+_2676878 0.20 ENSDART00000185909
antxr1c
anthrax toxin receptor 1c
chr13_-_638485 0.19 ENSDART00000066080
ENSDART00000128969
slit1a
slit homolog 1a (Drosophila)
chr5_-_71995108 0.18 ENSDART00000124587
fam78ab
family with sequence similarity 78, member Ab
chr21_+_25643880 0.16 ENSDART00000192392
ENSDART00000145091
tmem151a
transmembrane protein 151A
chr2_+_51783120 0.16 ENSDART00000177559
crygn1
crystallin, gamma N1
chr23_+_42810055 0.15 ENSDART00000186647
myl9a
myosin, light chain 9a, regulatory
chr2_+_24867534 0.15 ENSDART00000158050
rab3aa
RAB3A, member RAS oncogene family, a
chr8_+_7033049 0.14 ENSDART00000064172
ENSDART00000134440
gpd1a
glycerol-3-phosphate dehydrogenase 1a
chr17_-_44968177 0.14 ENSDART00000075510
ngb
neuroglobin
chr23_-_26536055 0.13 ENSDART00000182719
si:dkey-205h13.2
si:dkey-205h13.2
chr5_+_38886499 0.12 ENSDART00000076845
fras1
Fraser extracellular matrix complex subunit 1
chr22_+_26853254 0.12 ENSDART00000182487
tmem186
transmembrane protein 186
chr19_-_42928979 0.12 ENSDART00000086659
cyhr1
cysteine/histidine-rich 1
chr17_+_23578316 0.11 ENSDART00000149281
slc16a12a
solute carrier family 16, member 12a
chr5_-_1047504 0.10 ENSDART00000159346
mbd2
methyl-CpG binding domain protein 2
chr7_+_11390462 0.10 ENSDART00000114383
tlnrd1
talin rod domain containing 1
chr7_+_38509333 0.09 ENSDART00000153482
slc7a9
solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9
chr24_-_35707552 0.08 ENSDART00000165199
mapre2
microtubule-associated protein, RP/EB family, member 2
chr22_-_18116635 0.07 ENSDART00000005724
ncanb
neurocan b
chr17_-_23674495 0.07 ENSDART00000122209
ptena
phosphatase and tensin homolog A
chr16_-_45854882 0.06 ENSDART00000027013
ENSDART00000128068
ntrk1
neurotrophic tyrosine kinase, receptor, type 1
chr5_-_1047222 0.05 ENSDART00000181112
mbd2
methyl-CpG binding domain protein 2
chr1_-_9644630 0.04 ENSDART00000123725
ENSDART00000161164
ugt5b3
UDP glucuronosyltransferase 5 family, polypeptide B3
chr2_+_13721888 0.04 ENSDART00000089618
zbtb41
zinc finger and BTB domain containing 41
chr9_+_54158387 0.03 ENSDART00000171315
ENSDART00000180570
TLR8
toll like receptor 8
chr2_+_13722116 0.03 ENSDART00000155015
zbtb41
zinc finger and BTB domain containing 41
chr5_-_22001003 0.02 ENSDART00000134393
ENSDART00000143878
arhgef9a
Cdc42 guanine nucleotide exchange factor (GEF) 9a
chr24_-_38574631 0.02 ENSDART00000154539
slc17a7b
solute carrier family 17 (vesicular glutamate transporter), member 7b
chr18_+_33100606 0.01 ENSDART00000003907
si:ch211-229c8.13
si:ch211-229c8.13
chr12_-_145076 0.01 ENSDART00000160926
dnah9
dynein, axonemal, heavy chain 9
chr18_+_17827149 0.01 ENSDART00000190237
ENSDART00000189345
ZNF423
si:ch211-216l23.1
chr18_+_17151916 0.01 ENSDART00000175488
trhr2
thyrotropin releasing hormone receptor 2
chr23_-_36934944 0.00 ENSDART00000109976
ENSDART00000162179
acap3a
ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a
chr19_-_36640677 0.00 ENSDART00000189743
csmd2
CUB and Sushi multiple domains 2

Network of associatons between targets according to the STRING database.

First level regulatory network of glis2a+glis2b

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0014826 regulation of systemic arterial blood pressure by endothelin(GO:0003100) vein smooth muscle contraction(GO:0014826) regulation of prostaglandin-endoperoxide synthase activity(GO:0060584) positive regulation of prostaglandin-endoperoxide synthase activity(GO:0060585)
0.1 0.3 GO:0003319 cardioblast migration to the midline involved in heart rudiment formation(GO:0003319)
0.0 0.1 GO:0031630 regulation of synaptic vesicle fusion to presynaptic membrane(GO:0031630)
0.0 0.3 GO:0071340 skeletal muscle acetylcholine-gated channel clustering(GO:0071340)
0.0 0.1 GO:0006116 NADH oxidation(GO:0006116) glycerol-3-phosphate catabolic process(GO:0046168)
0.0 0.8 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.0 0.2 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.0 0.2 GO:1901998 toxin transport(GO:1901998)
0.0 0.4 GO:0006208 pyrimidine nucleobase catabolic process(GO:0006208)
0.0 0.1 GO:0031174 lifelong otolith mineralization(GO:0031174)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0043034 costamere(GO:0043034)
0.0 0.2 GO:0030897 HOPS complex(GO:0030897)
0.0 0.1 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 1.4 GO:0005882 intermediate filament(GO:0005882)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.8 GO:1990430 extracellular matrix protein binding(GO:1990430)
0.1 0.8 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.1 0.4 GO:0004142 diacylglycerol cholinephosphotransferase activity(GO:0004142)
0.1 0.4 GO:0031708 endothelin B receptor binding(GO:0031708)
0.0 0.3 GO:0004962 endothelin receptor activity(GO:0004962)
0.0 0.3 GO:0038064 protein tyrosine kinase collagen receptor activity(GO:0038062) collagen receptor activity(GO:0038064)
0.0 0.1 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 0.4 GO:0004157 dihydropyrimidinase activity(GO:0004157)
0.0 0.1 GO:0098809 nitrite reductase activity(GO:0098809)
0.0 0.1 GO:0051800 inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity(GO:0051717) phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity(GO:0051800)
0.0 0.7 GO:0004683 calmodulin-dependent protein kinase activity(GO:0004683)
0.0 0.2 GO:0048495 Roundabout binding(GO:0048495)
0.0 0.2 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 0.1 GO:0005030 neurotrophin receptor activity(GO:0005030)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.4 REACTOME NUCLEAR SIGNALING BY ERBB4 Genes involved in Nuclear signaling by ERBB4
0.0 0.4 REACTOME CRMPS IN SEMA3A SIGNALING Genes involved in CRMPs in Sema3A signaling
0.0 0.4 REACTOME SYNTHESIS OF PC Genes involved in Synthesis of PC
0.0 0.2 REACTOME RNA POL I PROMOTER OPENING Genes involved in RNA Polymerase I Promoter Opening