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PRJNA195909:zebrafish embryo and larva development

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Results for mta3

Z-value: 0.83

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Transcription factors associated with mta3

Gene Symbol Gene ID Gene Info
mta3
ENSDARG00000054903 metastasis associated 1 family, member 3
mta3
ENSDARG00000113436 metastasis associated 1 family, member 3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
mta3dr11_v1_chr12_+_25223843_252238730.853.9e-03Click!

Activity profile of mta3 motif

Sorted Z-values of mta3 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr17_-_2578026 1.95 ENSDART00000065821
zp3.2
zona pellucida glycoprotein 3, tandem duplicate 2
chr5_-_54712159 1.32 ENSDART00000149207
ccnb1
cyclin B1
chr1_+_15062 1.12 ENSDART00000169005
cep97
centrosomal protein 97
chr5_+_45139196 1.11 ENSDART00000113738
smarca2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr5_-_20678300 0.94 ENSDART00000088639
wscd2
WSC domain containing 2
chr1_+_14454663 0.92 ENSDART00000005067
rbpja
recombination signal binding protein for immunoglobulin kappa J region a
chr23_+_2825940 0.90 ENSDART00000135781
plcg1
phospholipase C, gamma 1
chr5_+_45138934 0.90 ENSDART00000041412
ENSDART00000136002
smarca2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
chr5_-_23800376 0.90 ENSDART00000134184
gbgt1l4
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4
chr21_+_44581654 0.89 ENSDART00000187201
ENSDART00000180360
ENSDART00000191543
ENSDART00000180039
ENSDART00000186308
TMEM164
transmembrane protein 164
chr22_+_26703026 0.89 ENSDART00000158756
crebbpa
CREB binding protein a
chr15_-_25198107 0.83 ENSDART00000159793
mnta
MAX network transcriptional repressor a
chr20_-_33675676 0.82 ENSDART00000147168
rock2b
rho-associated, coiled-coil containing protein kinase 2b
chr12_+_13348918 0.80 ENSDART00000181373
rnasen
ribonuclease type III, nuclear
chr5_+_20453874 0.77 ENSDART00000124545
ENSDART00000008402
sart3
squamous cell carcinoma antigen recognized by T cells 3
chr22_-_193234 0.77 ENSDART00000131067
fbxo42
F-box protein 42
chr20_+_9474841 0.76 ENSDART00000053847
rad51b
RAD51 paralog B
chr17_-_25630822 0.75 ENSDART00000126201
ENSDART00000105503
ENSDART00000151878
rab3gap2
RAB3 GTPase activating protein subunit 2 (non-catalytic)
chr6_+_3334392 0.74 ENSDART00000133707
ENSDART00000130879
st3gal3a
ST3 beta-galactoside alpha-2,3-sialyltransferase 3a
chr7_+_1579236 0.71 ENSDART00000172830
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit
chr4_-_13255700 0.70 ENSDART00000162277
ENSDART00000026593
grip1
glutamate receptor interacting protein 1
chr25_+_27744293 0.69 ENSDART00000103519
ENSDART00000149456
wasla
Wiskott-Aldrich syndrome-like a
chr13_+_23093743 0.67 ENSDART00000148034
pik3ap1
phosphoinositide-3-kinase adaptor protein 1
chr12_-_290413 0.59 ENSDART00000152496
adprm
ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent
chr17_-_8312923 0.57 ENSDART00000064678
lft2
lefty2
chr3_+_16566361 0.55 ENSDART00000132869
ENSDART00000080771
slc6a16a
solute carrier family 6, member 16a
chr6_-_12270226 0.53 ENSDART00000180473
pkp4
plakophilin 4
chr13_+_31545812 0.53 ENSDART00000076527
ppm1aa
protein phosphatase, Mg2+/Mn2+ dependent, 1Aa
chr14_-_237130 0.52 ENSDART00000164988
bod1l1
biorientation of chromosomes in cell division 1-like 1
chr10_-_9115383 0.50 ENSDART00000139324
si:dkeyp-41f9.3
si:dkeyp-41f9.3
chr6_+_3334710 0.42 ENSDART00000132848
st3gal3a
ST3 beta-galactoside alpha-2,3-sialyltransferase 3a
chr5_+_66433287 0.42 ENSDART00000170757
kntc1
kinetochore associated 1
chr16_-_280835 0.40 ENSDART00000190541
LO017917.1

chr13_-_10431476 0.35 ENSDART00000133968
camkmt
calmodulin-lysine N-methyltransferase
chr4_+_69577362 0.34 ENSDART00000160913
znf1030
zinc finger protein 1030
chr7_+_1467863 0.30 ENSDART00000173433
emc4
ER membrane protein complex subunit 4
chr25_-_35143360 0.27 ENSDART00000188033
zgc:165555
zgc:165555
chr20_-_54435287 0.26 ENSDART00000148632
yy1b
YY1 transcription factor b
chr20_-_51727860 0.23 ENSDART00000147044
brox
BRO1 domain and CAAX motif containing
chr2_-_16359042 0.19 ENSDART00000057216
arhgef4
Rho guanine nucleotide exchange factor (GEF) 4
chr13_+_1100197 0.18 ENSDART00000139560
ppp3r1a
protein phosphatase 3, regulatory subunit B, alpha a
chr22_-_367569 0.14 ENSDART00000041895
ssu72
SSU72 homolog, RNA polymerase II CTD phosphatase
chr3_-_5228137 0.09 ENSDART00000137105
myh9b
myosin, heavy chain 9b, non-muscle
chr7_+_17560808 0.07 ENSDART00000159699
ENSDART00000165724
ENSDART00000129017
ENSDART00000101955
nitr1b
novel immune-type receptor 1b
chr11_-_20956309 0.06 ENSDART00000188659
CABZ01008739.1

chr20_-_14665002 0.06 ENSDART00000152816
scrn2
secernin 2
chr5_-_38170996 0.05 ENSDART00000145805
si:ch211-284e13.12
si:ch211-284e13.12
chr25_-_35106751 0.04 ENSDART00000180682
ENSDART00000073457
zgc:194989
zgc:194989
chr21_+_45712247 0.04 ENSDART00000163982
camlg
calcium modulating ligand
chr23_-_24825863 0.02 ENSDART00000112493
syt6a
synaptotagmin VIa
chr14_-_2369849 0.01 ENSDART00000180422
ENSDART00000189731
ENSDART00000111748
pcdhb
protocadherin b

Network of associatons between targets according to the STRING database.

First level regulatory network of mta3

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.0 GO:0031507 heterochromatin assembly(GO:0031507)
0.3 0.9 GO:0035477 regulation of angioblast cell migration involved in selective angioblast sprouting(GO:0035477)
0.3 0.8 GO:1903003 positive regulation of protein deubiquitination(GO:1903003)
0.2 0.9 GO:0072149 glomerular visceral epithelial cell fate commitment(GO:0072149) glomerular epithelial cell fate commitment(GO:0072314)
0.1 1.3 GO:0007080 mitotic metaphase plate congression(GO:0007080)
0.1 1.9 GO:0007339 binding of sperm to zona pellucida(GO:0007339) egg coat formation(GO:0035803) regulation of acrosome reaction(GO:0060046) positive regulation of acrosome reaction(GO:2000344)
0.1 0.5 GO:0032515 negative regulation of phosphoprotein phosphatase activity(GO:0032515)
0.1 0.7 GO:0098887 neurotransmitter receptor transport, endosome to postsynaptic membrane(GO:0098887) endosome to plasma membrane protein transport(GO:0099638) neurotransmitter receptor transport, endosome to plasma membrane(GO:0099639)
0.1 0.9 GO:0030259 lipid glycosylation(GO:0030259)
0.0 0.1 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.7 GO:0051127 positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.0 0.3 GO:0045050 protein insertion into ER membrane by stop-transfer membrane-anchor sequence(GO:0045050)
0.0 0.6 GO:0034724 DNA replication-independent nucleosome organization(GO:0034724)
0.0 0.8 GO:1901888 regulation of cell junction assembly(GO:1901888)
0.0 0.6 GO:0003128 heart field specification(GO:0003128)
0.0 0.5 GO:0032467 positive regulation of cytokinesis(GO:0032467)
0.0 0.5 GO:0043124 negative regulation of I-kappaB kinase/NF-kappaB signaling(GO:0043124)
0.0 0.3 GO:0055090 acylglycerol homeostasis(GO:0055090) triglyceride homeostasis(GO:0070328)
0.0 0.1 GO:0070650 actin filament bundle distribution(GO:0070650)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.3 GO:0097125 cyclin B1-CDK1 complex(GO:0097125)
0.2 0.8 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 0.6 GO:0035101 FACT complex(GO:0035101)
0.1 2.0 GO:0016514 SWI/SNF complex(GO:0016514)
0.0 0.8 GO:0015030 Cajal body(GO:0015030)
0.0 0.5 GO:0000940 condensed chromosome outer kinetochore(GO:0000940)
0.0 0.3 GO:0072546 ER membrane protein complex(GO:0072546)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.9 GO:0035804 structural constituent of egg coat(GO:0035804)
0.2 1.2 GO:0008118 N-acetyllactosaminide alpha-2,3-sialyltransferase activity(GO:0008118)
0.1 0.8 GO:0072518 Rho-dependent protein serine/threonine kinase activity(GO:0072518)
0.1 0.8 GO:0017070 U6 snRNA binding(GO:0017070)
0.1 0.8 GO:0000400 four-way junction DNA binding(GO:0000400)
0.1 0.7 GO:0035259 glucocorticoid receptor binding(GO:0035259)
0.1 0.7 GO:0036312 phosphatidylinositol 3-kinase regulatory subunit binding(GO:0036312)
0.0 0.6 GO:0005160 transforming growth factor beta receptor binding(GO:0005160)
0.0 0.6 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.0 0.5 GO:0051721 protein phosphatase 2A binding(GO:0051721)
0.0 2.0 GO:0008094 DNA-dependent ATPase activity(GO:0008094)
0.0 0.3 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.9 GO:0004629 phosphatidylinositol phospholipase C activity(GO:0004435) phospholipase C activity(GO:0004629)
0.0 1.3 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 0.9 GO:0004402 histone acetyltransferase activity(GO:0004402)
0.0 0.1 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 0.5 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.6 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.1 GO:0070004 cysteine-type exopeptidase activity(GO:0070004)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.9 PID S1P S1P4 PATHWAY S1P4 pathway
0.0 3.3 PID CMYB PATHWAY C-MYB transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.9 REACTOME ROLE OF SECOND MESSENGERS IN NETRIN1 SIGNALING Genes involved in Role of second messengers in netrin-1 signaling
0.1 1.3 REACTOME RECRUITMENT OF NUMA TO MITOTIC CENTROSOMES Genes involved in Recruitment of NuMA to mitotic centrosomes
0.0 0.6 REACTOME ELONGATION ARREST AND RECOVERY Genes involved in Elongation arrest and recovery
0.0 0.7 REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers