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PRJNA195909:zebrafish embryo and larva development
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Results for pax1a+pax1b_pax9
Z-value: 0.18
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Transcription factors associated with pax1a+pax1b_pax9
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
pax1a
|
ENSDARG00000008203 | paired box 1a |
|
pax1b
|
ENSDARG00000073814 | paired box 1b |
|
pax9
|
ENSDARG00000053829 | paired box 9 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| pax9 | dr11_v1_chr17_-_38244117_38244117 | 0.66 | 5.4e-02 | Click! |
| pax1a | dr11_v1_chr17_+_42274240_42274240 | 0.62 | 7.4e-02 | Click! |
| pax1b | dr11_v1_chr20_-_48700370_48700370 | 0.55 | 1.2e-01 | Click! |
Activity profile of pax1a+pax1b_pax9 motif
Sorted Z-values of pax1a+pax1b_pax9 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr21_+_13861589 | 0.36 |
ENSDART00000015629
ENSDART00000171306 |
stxbp1a
|
syntaxin binding protein 1a |
| chr25_+_6306885 | 0.16 |
ENSDART00000142705
ENSDART00000067510 |
crabp1a
|
cellular retinoic acid binding protein 1a |
| chr17_+_996509 | 0.15 |
ENSDART00000158830
|
cyp1c2
|
cytochrome P450, family 1, subfamily C, polypeptide 2 |
| chr15_+_41836104 | 0.13 |
ENSDART00000137434
|
pxylp1
|
2-phosphoxylose phosphatase 1 |
| chr12_-_7854216 | 0.13 |
ENSDART00000149594
|
ank3b
|
ankyrin 3b |
| chr18_-_48550426 | 0.10 |
ENSDART00000145189
|
kcnj1a.1
|
potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 |
| chr5_-_29643381 | 0.08 |
ENSDART00000034849
|
grin1b
|
glutamate receptor, ionotropic, N-methyl D-aspartate 1b |
| chr5_-_201600 | 0.07 |
ENSDART00000158495
|
CABZ01088906.1
|
|
| chr20_+_12702923 | 0.07 |
ENSDART00000163499
|
zgc:153383
|
zgc:153383 |
| chr17_+_956821 | 0.06 |
ENSDART00000082101
|
ppp2r5ca
|
protein phosphatase 2, regulatory subunit B', gamma a |
| chr3_+_47322494 | 0.06 |
ENSDART00000102202
|
ppap2d
|
phosphatidic acid phosphatase type 2D |
| chr22_+_28337204 | 0.06 |
ENSDART00000163352
|
impg2b
|
interphotoreceptor matrix proteoglycan 2b |
| chr10_-_39154778 | 0.06 |
ENSDART00000186811
|
slc37a4b
|
solute carrier family 37 (glucose-6-phosphate transporter), member 4b |
| chr10_-_39154594 | 0.05 |
ENSDART00000148825
|
slc37a4b
|
solute carrier family 37 (glucose-6-phosphate transporter), member 4b |
| chr23_+_43255328 | 0.05 |
ENSDART00000102712
|
tgm2a
|
transglutaminase 2, C polypeptide A |
| chr6_-_41079209 | 0.05 |
ENSDART00000151592
|
rab44
|
RAB44, member RAS oncogene family |
| chr1_+_39553040 | 0.04 |
ENSDART00000137676
|
tenm3
|
teneurin transmembrane protein 3 |
| chr24_-_36727922 | 0.04 |
ENSDART00000135142
|
si:ch73-334d15.1
|
si:ch73-334d15.1 |
| chr1_-_46343999 | 0.04 |
ENSDART00000145117
ENSDART00000193233 |
atp11a
|
ATPase phospholipid transporting 11A |
| chr2_+_394166 | 0.03 |
ENSDART00000155733
|
mylk4a
|
myosin light chain kinase family, member 4a |
| chr12_+_33817327 | 0.03 |
ENSDART00000111486
|
mrpl43
|
mitochondrial ribosomal protein L43 |
| chr4_-_8902406 | 0.03 |
ENSDART00000192962
|
mpped1
|
metallophosphoesterase domain containing 1 |
| chr9_+_38074082 | 0.03 |
ENSDART00000017833
|
cacnb4a
|
calcium channel, voltage-dependent, beta 4a subunit |
| chr13_-_24379271 | 0.02 |
ENSDART00000046360
|
rhoua
|
ras homolog family member Ua |
| chr14_+_23518110 | 0.02 |
ENSDART00000112930
|
si:ch211-221f10.2
|
si:ch211-221f10.2 |
| chr5_-_1047504 | 0.02 |
ENSDART00000159346
|
mbd2
|
methyl-CpG binding domain protein 2 |
| chr11_+_37278457 | 0.02 |
ENSDART00000188946
|
creld1a
|
cysteine-rich with EGF-like domains 1a |
| chr25_-_29087925 | 0.02 |
ENSDART00000171758
|
rpp25a
|
ribonuclease P and MRP subunit p25, a |
| chr3_-_50277959 | 0.01 |
ENSDART00000082773
ENSDART00000139524 |
arl16
|
ADP-ribosylation factor-like 16 |
| chr16_+_20738740 | 0.01 |
ENSDART00000079343
|
jazf1b
|
JAZF zinc finger 1b |
| chr6_-_31224563 | 0.01 |
ENSDART00000104616
|
lepr
|
leptin receptor |
| chr9_+_34334156 | 0.00 |
ENSDART00000144272
|
pou2f1b
|
POU class 2 homeobox 1b |
| chr18_+_3140682 | 0.00 |
ENSDART00000166382
|
clns1a
|
chloride channel, nucleotide-sensitive, 1A |
| chr5_-_35743741 | 0.00 |
ENSDART00000046157
ENSDART00000123562 |
ophn1
|
oligophrenin 1 |
| chr11_-_165288 | 0.00 |
ENSDART00000108703
ENSDART00000173151 |
tegt
|
testis enhanced gene transcript (BAX inhibitor 1) |
| chr20_-_31075972 | 0.00 |
ENSDART00000122927
|
si:ch211-198b3.4
|
si:ch211-198b3.4 |
Network of associatons between targets according to the STRING database.
First level regulatory network of pax1a+pax1b_pax9
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0016103 | diterpenoid catabolic process(GO:0016103) terpenoid catabolic process(GO:0016115) retinoic acid catabolic process(GO:0034653) |
| 0.0 | 0.1 | GO:0042762 | regulation of sulfur metabolic process(GO:0042762) |
| 0.0 | 0.0 | GO:0070983 | dendrite guidance(GO:0070983) regulation of homophilic cell adhesion(GO:1903385) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0050649 | testosterone 6-beta-hydroxylase activity(GO:0050649) |
| 0.0 | 0.2 | GO:0001972 | retinoic acid binding(GO:0001972) |